mRNA_A-nodosum_M_contig1154.2.6 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1154.2.6
Unique NamemRNA_A-nodosum_M_contig1154.2.6
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 1387 bits (3591), Expect = 0.000e+0
Identity = 809/1559 (51.89%), Postives = 986/1559 (63.25%), Query Frame = 1 
Query:   19 KEDISLAKRYPLPDEELWEEEQQLGIQPRPWPAPGTLPIPPGFPARAFEDAVSAWSCLQLFGTLMHLRRFSLNELMVALVEGTESSTIDSNGASSSSWDHEVQAPTSQLPQGPDPPLADPASLG--VFRRVEPRRTAVARGFADLATGRDGNEDERSSMPMQAIALDPLGEVIRILRHVMRSEESRPFLGTPTDADVNSEG---------------------VVTGHQPRRPLDLGTILKRAEDGWYDMDPGSQPPVTSNSSGAGHAGVAQDVELVQEGWLEARGRDSVIYEQARALVDDFMALYEAHVLKPLGHLERSDR------------------EGRCPATKDGNDGDGNREGFASSLSPPKLDSKLDSMEMLRRMGSEEYSRWSPAVKSRALAMLCDEAMSSGTLSDVARKVFEARETVDRRDGEMKAAVKDMIRGQQTRESQGLQAPTSTSRRETEAEMVAARLAAEGPELKILRQLGHLRVRLKPLGTDRDRRRYWLLTQGEDHRVFTQLDYEWGCYERVSQLKALHTWLDRRGARERVLKAAIREHLTINLGVSPDDLYPPSRPSG--LRGRADWST----GEDSTCYEE-----DRQEHIGEPAEVAREKERERAAGKEALKSCGFFAEEQRDVLQRQCSAFAVDRHSLRAAGLAFKRETSAVVMRDVVVHMGPHGLDLWLKKQHGGVVVSKYLELAPDV-HPGQAAGVQVGDLVVSVDSIVAEGPESLRERLIDVHLAKSDKKAIMKVLTRVPLTDGRGEPLASAMKYSAVDMVKGALLEGEIVLHHSFVIGADWEGQACREWRLGVSFAGQDVGRSLEHG-----TLTAAGATSTNSSGR------TGQTDGSEAVAFPTGHYPPLQEIGAIELGPVTEEAVKDAVKQLGKRMLQLEALVSRQDTVVDARWGKEGRCRKWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAPWDVDEPEPGAIGQFTVKTIEYDQGGSRRSAKGAQPFVTMELEPLTTRNTFPELGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKVGMATLDEPTLAAALRKMVEDGSRLENVWSTHMLAAISAAPELATMPGMRKIASRQLGFSTGGDQE--AGGDTRESESDDDDGQPDAASIARQVFYDKLVGIKYGTPRPDKPSITRPQKHEGRNPTKPRPKPEYGGRIGFQEQVTHSI-ATTRASSSSSSVVIPEHQPLGLVAKVDPPSSSTEVITPMDVEPEVNTPPNTMTLPSTDRVAIADITDMETDATGTIPASSITVKSEDEAGSDNALAMTPLAAGSANGVGTPASEGDQVEPDSGARPEARTGGTLWVSMRLNNEMPEFVVMASKYKKAVGFEWRSEMRIRMSSSEETGESSRVHEGMLVGVKQMDKDTGIMPWESLQVEWDDETDANTVNPWEVEAASAAMVAARHHPPG 4494
            KE   LAKRYPLPDEEL +E+  +G QP PWP PG LP P GFP  AF D VSAW+CLQLFGTLMHL+RFSL+ELMV L  G  +  ++++G    + +  +    + +   P+         G  V RRVE RR A A                          LDPLGEV+RILRH+++SEE++PF   P+D DV  E                           + +RPLDLGTIL+RAE+GWYD++PG++PPV SNS GAGHAGVA DVEL+Q+GWLEA+G DS I+EQAR +VD+F+ALYE HVL PL  L++  R                  EGR     D  D +G R G      P         +EM+R+MGSEEY RWSPA +SRALA LCDEA+S+ T++D+ ++V EA+E VDR+D E+KAAV+  +R Q+  E++G   P +  RR TEAEM+ AR+  E P++K +R+LG ++VRLKPLG DRDRRRYWL   GEDHR+F + +  WGCY RVSQLKALH WLDRRG RER LKAA+REHL  NLGVS  +L P  RP G   RGR+D       G +           D Q+++GEPAEVAREKERER+AG  AL SCGF AEEQR  L+R CS+FAVD HSLRAAGLAF+ +TS  VMRD+ VHMGP+GL L L  +HGGVVV    ++ P V +PGQAAGV++GDL+VSVD+IVAE P  L + L D  L++S K  ++KVL+ V LTDG+GEPL  A+ Y+A+DMVKGALLE E  LHHSFV+G  WEGQAC EWRLGVSFAGQ   ++   G      + A GAT + +  +      T +  G     F  G  P L+  G + LGP +  A + AV++L +RML +EALV +QDTVVDARW + GR RKWRTFV+NAQTA QLLAAWGAF+++IDW+AA GC Y  L+RRKFL+LLP + RN +PDKG+ V+Y+GDGH LS+EAEAKAGYR  W  D P PG + Q TVK+I Y QGGS R AKGAQPF T+ELEP     +F ELGLLPP EPFG LNRLLK+++KAMR   DV HFL PVSR IYPDYYDVISEPMDL+ LWKRCS CRY++VE+FK +L+LVASNCRLYCQDKFP LPPAADAAV VGM TLDEP LAA L K VEDG RLE +W+ HM AAISA+PELATMPGM+K+A RQLGF TG  +E   G   +ES+ DDD GQPD ASIARQVFYDKLVGIKYGTP  +       +KH+             G   G  ++    +  T  A S +++ V P     G            +                            A  +   T A G                                             P +   P    GG L VSMRL+NEMPEFVV+ SKY +A+ F WRSEM I+M+  EE GE  R+ EG LVGVK  D  T +MPWE L VEWDDE   NTVNPWEVEA SAA  AAR   PG
Sbjct:  641 KERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGQLPCPRGFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPA--VEADGPPDDAAEDLLDIIPAPVGSDPNEDAGGVGGYGEGVLRRVETRRMA-AXXXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVTPESESGLGDDGGFXXXXXXXXXXXXXXKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRVLLRSD-TDSEGARRGATGCNDP---------LEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHN--RRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKAALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDVLLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGGGRETDVPAGGATPSFTEPKKQQQQATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGC-YSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLA-RQLGFDTGTAEEDDIGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTPDEE-------EKHQ-----------TDGSDSGDAKKKPPKLDETPEARSPTANGVSPTPPSPGXXXXXXXXXXXPQASPSXXXXXXXXXXXXXXXXXXXXXXGEASPSSAATCAPGAXXXXXTPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAPVAPAVVPGGVLRVSMRLSNEMPEFVVVTSKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLMVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPG 2164
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BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 610 bits (1574), Expect = 7.360e-195
Identity = 364/741 (49.12%), Postives = 424/741 (57.22%), Query Frame = 1 
Query: 2416 GSEAVAFPTGHYPPLQEIGAIELGPVTEEAVKDAVKQLGKRMLQLEALVSRQDTVVDARWGKEGRCRKWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAPWDVDEPEPGAIGQFTVKTIEYDQGGSRRSAKGAQPFVTMELEPLTTRNTFPELGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKVGMATLDEPTLAAALRKMVEDGSRLENVWSTHMLAAISAAPELATMPGMRKIASRQLGFSTGGDQE--AGGDTRESESDDDDGQPDAASIARQVFYDKLVGIKYGTPRPDKPSITRPQKHEGRNPTKPRPKPEYGGRIGFQEQVT-HSIATTRASSSSSSVVIPEHQPLGLVAKVDPPSSSTEVITPMDVEPEVNTPPNTMTLPSTDRVAIADITDMETDATGTIPASSITVKSEDEAGSDNALAMTPLAAGSANGVGTPASEGDQVEPD---------------------------------------------SGARPEARTGGTLWVSMRLNNEMPEFVVMASKYKKAVGFEWRSEMRIRMSSSEETGESSRVHEGMLVGVKQMDKDTGIMPWESLQVEWDDETDANTVNPWEVEAASAAMVAARHHPPG 4494
            G     F  G  P L+  G + LGP +  A + AV++L +RML +EALV +QDTVVDARW + GR RKWRTFV+NAQTA QLLAAWGAF+++IDW+AA GC Y  L+RRKFL+LLP + RN +PDKG+ V+Y+GDGH LS+EAEAKAGYR  W  D P PG + Q TVK+I Y QGGS R AKGAQPF T+ELEP     +F ELGLLPP EPFG LNRLLK+++KAMR   DV HFL PVSR IYPDYYDVISEPMDL+ LWKRCS CRY++VE+FK +L+LVASNCRLYCQDKFP LPPAADAAV VGM TLDEP LAA L K VEDG RLE +W+ HM AAISA+PELATMPGM+K+A RQLGF TG  +E   G   +ES+ DDD GQPD ASIARQVFYDKLVGIKYGTP          QK +G + +  + KP            T + ++ T     S                                                                                                     P S      P                                              +   P    GG   VSMRL+NEMPEFVV+ASKY +A+ F WRSEM I+M+  EE GE  R+ EG LVGVK  D  T +MPWE L VEWDDE   NTVNPWEVEA SAA  AAR   PG
Sbjct:   18 GGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLHIEALVFKQDTVVDARWSEFGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGC-YSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGSSRRAKGAQPFATIELEPTPVPRSFEELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELSKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLA-RQLGFDTGAAEEDDVGRGGQESDEDDDYGQPDTASIARQVFYDKLVGIKYGTP-----DEGEKQKTDGNDSSDVKKKPSILDETPEARSPTANGVSPTPLWPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASQPRSPSTAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAPAIAPGGVFRVSMRLSNEMPEFVVVASKYDEAMTFNWRSEMHIQMAFMEEPGEPPRIFEGTLVGVKPKDPRTQMMPWECLIVEWDDEAGMNTVNPWEVEAVSAATAAARRRAPG 751
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BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 562 bits (1449), Expect = 1.130e-165
Identity = 381/920 (41.41%), Postives = 483/920 (52.50%), Query Frame = 1 
Query:   19 KEDISLAKRYPLPDEELWEEEQQLGIQPRPWPAPGTLPIPPGFPARAFEDAVSAWSCLQLFGTLMHLRRFSLNELMVALVEG--------------TESSTIDSNGASSSSWDHEVQAPT---SQLPQGPDPPLAD------PASLGVFRRVEPRRTAVARGFADLATGRDGNEDE--RSSMP---------------------------------------------------------------------------------MQAIA-------------------------------------------LDPLGEVIRILRHVMRSEESRPFLGTPTDADVNSE-----------------GVVTGHQPR-------RPLDLGTILKRAEDGWYDMDPGSQPPVTSNSSGAGHAGVAQDVELVQEGWLEARGRDSVIYEQARALVDDFMALYEAHVLKPLGHLERSDR--------------EGRCPATKDGNDGDGNREGFASSLSPPKLDSKLDSMEMLRRMGSEEYSRWSPAVKSRALAMLCDEAMSSGTLSDVARKVFEARETVDRRDGEMKAAVKDMIRGQQTRESQGLQAPTSTSRRETEAEMVAARLAAEGPELKILRQLGHLRVRLKPLGTDRDRRRYWLLTQGEDHRVFTQLDYEWGCYER-------VSQLKALHTWLDRRGARERVLKAAIREHLTINLGVSPDDLYPPSRPSG--LRGRADWS---------TGEDSTCYEEDRQEHIGEPAEVAREKERERAAGKEALKSCGFFAEEQRDVLQRQCSAFAVDRHSLRAAGLAFKRETSAVVMRDVVVHMGPHGLDLWLKKQHGGVVVSKYLELAPDV-HPGQAAGVQVGDLVVSVDSIVAEGPESLRERLIDVHLAKSDKKAIMKVLTRVPLTD 2160
            KE   LAKRYPLPDEEL +E+  +G QP PWP PG LP P GFP  AF D VSAW+CLQLFGTLMHL+RFSL+ELMV L  G              ++    D  G + +    +  APT   S    GP    A+      PA +G      P   A   G   L  GR+G ++   R+ +P                                                                                 ++ +A                                           LDPLGEV+RILRH+++SEE++PF   P+D DV  E                 GVV   + +       RPLDLGTIL+RAE+GWYD++PG++PPV SNS GAGHAGVA DVEL+Q+GWLEA+G DS I+EQAR +VD+F+ALYE HVL PL  L++  R              EGR     D  D +  R G A    P         +EM+R+MGSEEY RWSPA +SRALA LCDEA+S+ T++D+ +KV EA+E VDR+D E+KAAV+  +R Q+  E++G   P +  RR TEAEM+ AR+  E P++K +R+LG ++VRLKPLG DRDRRRYWL   GE         Y W             S  ++   W           +AA+REHL  NLGVS  +L P  RP G   RGR+D             E     EED Q+++GEPAEVAREKERER+AG  AL SCGF AEEQR  L+R CS+FAVD HSLRAAGLAF+ +T   VMRD+ VHMGP+GL L L  +HGGVVV    E+ P V +PGQAAGV++GDL+VSVD+IVAE P  L + L D  L++S K  ++K   R   T+
Sbjct:  953 KERARLAKRYPLPDEELRQEQLLMGKQPAPWPEPGKLPCPRGFPPSAFGDVVSAWACLQLFGTLMHLKRFSLDELMVGLANGAPEVQARDGSSPFPSQQQQNDHLGTAWAGHTSDGNAPTPFFSSQAGGPPADAAEDLLDIIPAPVG----SGPNEDAGGVGGYGLRCGREGKQETYWRNLLPSVNRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGGAPETTLPGLRDSRELVQASPHGFPELLRLVAIHREGLLRRVETRRMAAXXXXXXXXXXXXXXXXXXXXXXXXXXLDPLGEVMRILRHLLKSEEAKPFADVPSDDDVAPESESDLGDDGGFGGQGEGGVVNKEEEKEEKAEVKRPLDLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAAGRGELEEGRVLLRSD-TDSEDARRGAAGCNDP---------LEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEARGFHNPHN--RRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEALTT----GYSWSTTRFGGVTPGFPSSRRSTSGWTVEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKACDRFVKTN 1852
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BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.020e-47
Identity = 211/733 (28.79%), Postives = 303/733 (41.34%), Query Frame = 1 
Query: 1285 AEMVAARLAAEGPELKILRQLGHLRVRLKPLGTDRDRRRYWLLTQGEDHRVFTQLDYEWGCYERVSQLKALHTWLDRRGARERVLKAAIREHL---TINLGVSPDDLYPPSRPSGLRGRADWSTGEDSTCYEEDRQEHIGEPAEVAREKERERAAGKEALKSCGF-FAEEQRDVLQRQCSAFAVDRHSLRAAGLAFKRETSAVVMRDVVVHMGPHGLDLWLKKQHGGVVVSKYLELA---PDVHPGQAAGVQVGDLVVSVDSIVAEGPESLRERL-------IDVHLAKSDKKAI-MKVLTRVPLTDGRGEPLASAMKYSAVDMVKGALLEGEIVLHHSFVIGADWEG-QACREWRLGVSFAGQDVGRSLEHGTLTAAGATSTNSSGRTGQTDGSEAVAFPTGHYPPLQEIGAIELGPVTEEAVKDAVKQLGKRMLQLEALVSRQDTV--VDARWGKEGRCRKWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAPWDVDEPEPGAIGQFTVKTIEYDQG---GSRRSAKGAQPFVTMEL--------EPLTTRNTFPE--------LGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKVGMATLDEPTL 3372
            A++   +LA+E  E+K  R L  L  RL+PLG DR  RRYWL+ + E        D      E  +   +  T        + +    IRE+     +   +  + L   S+PS L          D  CY   R   +  PA +        AAG     S  F  A++QR  L   C    V   +L        RE   ++  DV    G HG+ L  +K  G + V +  E     PD      AGV   D +V+V       PE +           ++V  A  D+    ++ +  VPL D   +      +   +  + G LL+ E +L H + +G  W G +    WR  V                                                           ++   V D V  L    L LE+ ++ + TV  VD RW +  R RKWR FV  A+T+AQL+ AW A E  +DW A +   +  L+RR FL  +P   RN +PD G+ V+YFGDGH  ++  +   G  A W    P  GA+    V+ I Y  G   GS  S    QPF T +L        + + + +  PE        LGL PP +  G LNRLL+RS+     TP    F++PV  +  PDY +V++ PMDL T+W++     Y T+EQF+ DL+LV  NC  YC  ++P L    +  VK    TL  P L
Sbjct: 1355 AQVAKEQLASESAEMKSYRYLAALVQRLEPLGHDRHHRRYWLINRDETAGA----DSGHVLAEDGTNWYSFSTVGSLLELHKWLDARGIRENALRQVLRHLLLDNGL---SQPSELAAHHH----PDEHCYA--RVAFLA-PARIL-------AAG-----SMDFTMAQQQRSALTLGCKDLIVAPDALVPPDDTSYREGPLLLSADVEAG-GGHGMTLVAEK--GSLFVKRACEKGGGGPDA--AARAGVLAKDGLVAVRGRCVRTPEEVAALAEASHIVAVEVETADQDQPTYSIQFVRTVPLED---KDTKLPAQIPPLQYLAGLLLDSESLLCHPYNVGEGWVGGRKSVAWRQSV-----------------------------------------------------------ISATTVSDLVPAL----LDLESALAHKQTVLGVDGRW-QGARRRKWRAFVARARTSAQLVIAWSALEACLDW-ATAAAVWAALSRRAFLQNIPSQGRNTMPDIGDVVVYFGDGHTAALTFDKALGLSAMWGGQPPVEGAVLLCRVQEIAYCTGVPQGSELSPM--QPFATFKLXXXXXXXXQVIPSDHQEPEVPTLPKEPLGLKPPGDSRGMLNRLLRRSLAVASRTPGSQPFMQPVDYSTNPDYREVVARPMDLGTIWRQTVEGHYATLEQFEQDLALVLDNCHAYCDSRYPWLSKDCERVVKAARDTLAHPEL 1986
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BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: I2CQX7_NANGC (Transcription initiation factor TFIID subunit 1 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX7_NANGC)

HSP 1 Score: 134 bits (336), Expect = 1.610e-27
Identity = 132/482 (27.39%), Postives = 200/482 (41.49%), Query Frame = 1 
Query: 1996 PGQAAGVQVGDLVVSVDSIVAEGPE----SLRERLIDVHLAKSDKKAIMKVLTRVP---LTDGRGEPLASAMKYSAVDMVKGALLEGEIVLHHSFVIGADWEGQACR-EWRLGVSFAGQDVGRSLEHGTLTAAGATSTNSSGRTGQTDGSEAVAFPTGHYPPLQEIGAIELGPVTEEAVKDAVKQLGKRMLQLEALVSRQDTVVDARWGKEGRCR----KWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAP-WDVDEPEP---------GAIGQFTVKTIEY---DQGGSRRSAKGAQPFVTM-ELEPLTTRNTFPE--LGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKVGMATL 3357
            P    G+ V D +V V+  + +GP+    ++ +    VHL   + +    ++ R      T    + L   +  S  + V+G LL  E  + H   IG DWEG   +  WR       Q V R+L                      DG +  A                      E+++ A  +L  R+     ++S++D        +EGR +    KWR ++  AQT +QLL        ++D    +     ++ R  + ALLP+    E+PD G+ VIY+  GH  ++   A+  ++ P W+V+ P           GA+    V  IEY   D       A  A   V +  L        +PE  L L  P EP  +L+RLL R + +     +   F EPV R  YPDYY++I  PMD +TL  R     Y  +  F  DL L++ NC  YC  +FP LP  AD  V V   T+
Sbjct:  318 PFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWR-------QMVMRAL----------------------DGEKKKA----------------------ESLRKAALELEGRLRACGTVLSKED--------REGRAKGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQ-SMERAAWQALLPKEKSIELPDVGSFVIYYPQGHKAAMRHNAR--FQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYRPVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETV 737
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BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: W7U279_9STRA (Transcription initiation factor subunit taf1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U279_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.050e-27
Identity = 132/482 (27.39%), Postives = 200/482 (41.49%), Query Frame = 1 
Query: 1996 PGQAAGVQVGDLVVSVDSIVAEGPE----SLRERLIDVHLAKSDKKAIMKVLTRVP---LTDGRGEPLASAMKYSAVDMVKGALLEGEIVLHHSFVIGADWEGQACR-EWRLGVSFAGQDVGRSLEHGTLTAAGATSTNSSGRTGQTDGSEAVAFPTGHYPPLQEIGAIELGPVTEEAVKDAVKQLGKRMLQLEALVSRQDTVVDARWGKEGRCR----KWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAP-WDVDEPEP---------GAIGQFTVKTIEY---DQGGSRRSAKGAQPFVTM-ELEPLTTRNTFPE--LGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKVGMATL 3357
            P    G+ V D +V V+  + +GP+    ++ +    VHL   + +    ++ R      T    + L   +  S  + V+G LL  E  + H   IG DWEG   +  WR       Q V R+L                      DG +  A                      E+++ A  +L  R+     ++S++D        +EGR +    KWR ++  AQT +QLL        ++D    +     ++ R  + ALLP+    E+PD G+ VIY+  GH  ++   A+  ++ P W+V+ P           GA+    V  IEY   D       A  A   V +  L        +PE  L L  P EP  +L+RLL R + +     +   F EPV R  YPDYY++I  PMD +TL  R     Y  +  F  DL L++ NC  YC  +FP LP  AD  V V   T+
Sbjct: 1309 PFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWR-------QMVMRAL----------------------DGEKKKA----------------------ESLRKAALELEGRLRACGTVLSKED--------REGRAKGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQ-SMERAAWQALLPKEKSIELPDVGSFVIYYPQGHKAAMRHNAR--FQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYRPVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETV 1728
[Close]
BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A0P1AKP8_PLAHL (CREB binding protein/P300 and related TAZ Zn-finger proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP8_PLAHL)

HSP 1 Score: 131 bits (329), Expect = 1.230e-26
Identity = 87/249 (34.94%), Postives = 124/249 (49.80%), Query Frame = 1 
Query: 2617 KWRTFVHNAQTAAQLLAAWGAF-EEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGY-RAPWDVDEPEPGAIGQFTVKTIEYDQGGSRRSAKGAQPFVTMELEPLTTRNTF-----PELGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKV 3342
            +WR  +    T AQL+       EE I  EA     +  L+RR++L L P+   N IP+ G +VIYFGDGHAL+++ + K+   R     D+P   A    +VK++ Y  GG         P+    LEP++          P     P P     L R+  R +  ++G  D   FLEPVS   +P Y ++I  PMDL T+  + S   YK   +F  DL L+  NC+L+C+D+FP LPP A   V V
Sbjct: 1518 EWRLALEGVCTYAQLVFLLHLLLEEFISVEAFMD-LHIRLDRREWLKLRPKETHNFIPEVGQTVIYFGDGHALALKEDDKSKRKRFTQKSDKPVRNATVICSVKSVSYHHGGG-------DPYALAVLEPISDPAQHGCVREPGTYFCPLPSREHRLARVFLRILAKLKGLADADPFLEPVSDWEFPQYKEIILHPMDLKTITMKASNLEYKNAAEFMSDLKLMRDNCQLFCEDRFPTLPPLAHNLVYV 1758
[Close]
BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A485LQJ0_9STRA (Aste57867_24503 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQJ0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.420e-26
Identity = 88/267 (32.96%), Postives = 132/267 (49.44%), Query Frame = 1 
Query: 2539 MLQLEALVSRQ--DTVVDARWGKEGRCRKWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAPWDVDEPEPGAIGQFTVKTIEYDQGGSRRSAKGAQPFVTMELEPLTT---RNTFPELGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAA 3324
            +L+LE   S    D ++  +W ++ R  +W+  V  +QT AQLL       +      A   +   L+R+++  L P++ARN  P+    V+YFGDGHA +++ + K   + P   D P         V  + Y  G          P+  + + P      R T  EL L  PP     L R+L R +  +R  PD   FLEPVS+  +P Y D+I +PMDLS +  +  T +Y  V+ F  DL L+A NC L+C+ +FP LPP A
Sbjct: 1265 ILELEKYFSTSLNDDLIQQQWKRKRR--EWQMGVEGSQTFAQLLFLMNYLLQECFVLDAFVDYVVQLDRKEWFKLRPKSARNFCPEVDQDVVYFGDGHAQAMKDDKKN--KKPVKCDAPLLKTTIACKVTNVSYHHGSG-------DPYALVTMVPHVNSAFRKTPGEL-LCTPPSSVQRLGRVLMRIVGKLRSDPDSGPFLEPVSKVDFPTYTDIILKPMDLSKIANKVKTEKYNNVKDFVDDLKLMADNCSLFCEGRFPTLPPMA 1519
[Close]
BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A2D4C0X0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0X0_PYTIN)

HSP 1 Score: 128 bits (322), Expect = 4.910e-26
Identity = 87/287 (30.31%), Postives = 145/287 (50.52%), Query Frame = 1 
Query: 2491 VTEEAVKDAVKQLGKRMLQLEALVSR--QDTVVDARWGKEGRCRKWRTFVHNAQTAAQLLAAWGAF-EEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGY-RAPWDVDEPEPGAIGQFTVKTIEYDQGGSRRSAKGAQPFVTMELEPLT-----TRNTFPELGLLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAA 3324
            + E A  D+V+ L K+ L++E + S+   DTV   R   + + R+W   +  + T +QL      F  E ++ EA        L++++++ L P+  RN IP+ G +++YFGDGHA ++  ++K    R     D P P      T+  I +  GG         P+  + ++P+      +    P   + PPP P   L R+L R    +R  PD   F++PVS   +P+Y ++I  PMDLS +  +   C Y +   F  D+ L+ +NC L+C+ +FP+LPP A
Sbjct:  551 IKETASFDSVRALAKK-LEMEVVASKCAGDTV---RHSWKRKRREWLLALDGSHTYSQLGFLLHLFLAECVNAEAFLDLSV-RLDKKEWMKLRPKECRNFIPEVGKTIVYFGDGHAQALREDSKVKKKRFTRKSDPPLPSTTLLCTIVDISFYHGGG-------DPYALLVMKPIEDIAEHSCARSPGSCICPPPTPSQQLARVLVRITSKLRAHPDSAPFMDPVSDRDFPEYKEIIPRPMDLSKVHVKARKCEYASAADFLDDIRLICNNCELFCEGRFPDLPPLA 825
[Close]
BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Match: A0A024TEJ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEJ5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.690e-26
Identity = 88/266 (33.08%), Postives = 132/266 (49.62%), Query Frame = 1 
Query: 2539 MLQLEALV--SRQDTVVDARWGKEGRCRKWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAPWDVDEPEPGAIGQFTVKTIEYDQGGSRRSAKGAQPFVTMELEPLTTRNTFPELG--LLPPPEPFGTLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKRCSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAA 3324
            +L+LE  +  S  D +V   W ++     WR+ V  ++T  QLL    A  +      A   +   L+R+++L L P+ +RN  P+    V+YFGDGH  +V+A+ K   + P   D P  G      V  I Y  G          P+  + L P +        G  L   P     L R+L R +  +R  PD   FL+PVS+A +P Y D+I  PMDLS + +     +YKTV++F  D+ L+A NC+L+C+ +FP LPP A
Sbjct: 1298 VLELEQYLFTSLNDDLVQDVWKRKRH--DWRSAVEASRTFPQLLVLVMALLDKCFIVDAFIDYVVQLDRKEWLKLRPKPSRNFCPEVDQQVVYFGDGHDQAVKADRKN--KKPVKCDAPLVGTTLICRVTHISYHHGSG-------DPYAMLTLRPESDAALARAPGSYLCTSPSAVQKLGRILARIVSKLRAEPDAGPFLDPVSKADFPTYTDIIVHPMDLSKISQNVHDGKYKTVDEFVGDVKLMADNCQLFCEGRFPTLPPMA 1552
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1154.2.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R7_ECTSI0.000e+051.89Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L3E5_9PHAE7.360e-19549.12Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L351_9PHAE1.130e-16541.41DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZDW7_9STRA4.020e-4728.79Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
I2CQX7_NANGC1.610e-2727.39Transcription initiation factor TFIID subunit 1 (F... [more]
W7U279_9STRA2.050e-2727.39Transcription initiation factor subunit taf1 n=2 T... [more]
A0A0P1AKP8_PLAHL1.230e-2634.94CREB binding protein/P300 and related TAZ Zn-finge... [more]
A0A485LQJ0_9STRA4.420e-2632.96Aste57867_24503 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4C0X0_PYTIN4.910e-2630.31Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A024TEJ5_9STRA7.690e-2633.08Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1154contigA-nodosum_M_contig1154:2029..15115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6R7
PFAMsAuxin_resp,Bromodomain,DNMT1-RFD,DUF3591,WSD
Model size5364
Max annot lvl2759|Eukaryota
KEGG koko:K03125
KEGG Pathwayko03022,map03022
Hectar predicted targeting categoryother localisation
Exons24
Evalue0.0
EggNOG OGsCOG5179@1|root,KOG0008@2759|Eukaryota
Descriptionnegative regulation of protein autoubiquitination
Cds size4293
COG categoryK
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866558.2327049-UTR-A-nodosum_M_contig1154:2028..20911680866558.2327049-UTR-A-nodosum_M_contig1154:2028..2091Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1154 2029..2091 +
1680866558.311002-UTR-A-nodosum_M_contig1154:2655..28021680866558.311002-UTR-A-nodosum_M_contig1154:2655..2802Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1154 2656..2802 +
1680866558.6342468-UTR-A-nodosum_M_contig1154:14254..151151680866558.6342468-UTR-A-nodosum_M_contig1154:14254..15115Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1154 14255..15115 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866558.3216407-CDS-A-nodosum_M_contig1154:2802..28161680866558.3216407-CDS-A-nodosum_M_contig1154:2802..2816Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 2803..2816 +
1680866558.3297162-CDS-A-nodosum_M_contig1154:3128..32911680866558.3297162-CDS-A-nodosum_M_contig1154:3128..3291Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 3129..3291 +
1680866558.3378434-CDS-A-nodosum_M_contig1154:3702..40261680866558.3378434-CDS-A-nodosum_M_contig1154:3702..4026Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 3703..4026 +
1680866558.3483582-CDS-A-nodosum_M_contig1154:4193..43101680866558.3483582-CDS-A-nodosum_M_contig1154:4193..4310Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 4194..4310 +
1680866558.3562317-CDS-A-nodosum_M_contig1154:4626..49861680866558.3562317-CDS-A-nodosum_M_contig1154:4626..4986Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 4627..4986 +
1680866558.3660173-CDS-A-nodosum_M_contig1154:5243..52991680866558.3660173-CDS-A-nodosum_M_contig1154:5243..5299Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 5244..5299 +
1680866558.381286-CDS-A-nodosum_M_contig1154:5676..58571680866558.381286-CDS-A-nodosum_M_contig1154:5676..5857Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 5677..5857 +
1680866558.3941445-CDS-A-nodosum_M_contig1154:6352..64691680866558.3941445-CDS-A-nodosum_M_contig1154:6352..6469Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 6353..6469 +
1680866558.4044406-CDS-A-nodosum_M_contig1154:6903..70471680866558.4044406-CDS-A-nodosum_M_contig1154:6903..7047Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 6904..7047 +
1680866558.4142334-CDS-A-nodosum_M_contig1154:7604..77291680866558.4142334-CDS-A-nodosum_M_contig1154:7604..7729Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 7605..7729 +
1680866558.4261863-CDS-A-nodosum_M_contig1154:8082..82751680866558.4261863-CDS-A-nodosum_M_contig1154:8082..8275Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 8083..8275 +
1680866558.4341116-CDS-A-nodosum_M_contig1154:8665..87941680866558.4341116-CDS-A-nodosum_M_contig1154:8665..8794Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 8666..8794 +
1680866558.441913-CDS-A-nodosum_M_contig1154:8994..90781680866558.441913-CDS-A-nodosum_M_contig1154:8994..9078Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 8995..9078 +
1680866558.4501786-CDS-A-nodosum_M_contig1154:9595..99541680866558.4501786-CDS-A-nodosum_M_contig1154:9595..9954Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 9596..9954 +
1680866558.458541-CDS-A-nodosum_M_contig1154:10170..102791680866558.458541-CDS-A-nodosum_M_contig1154:10170..10279Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 10171..10279 +
1680866558.549977-CDS-A-nodosum_M_contig1154:10500..106621680866558.549977-CDS-A-nodosum_M_contig1154:10500..10662Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 10501..10662 +
1680866558.5601714-CDS-A-nodosum_M_contig1154:10906..110561680866558.5601714-CDS-A-nodosum_M_contig1154:10906..11056Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 10907..11056 +
1680866558.5697932-CDS-A-nodosum_M_contig1154:11412..115721680866558.5697932-CDS-A-nodosum_M_contig1154:11412..11572Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 11413..11572 +
1680866558.5802867-CDS-A-nodosum_M_contig1154:11816..119981680866558.5802867-CDS-A-nodosum_M_contig1154:11816..11998Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 11817..11998 +
1680866558.5908682-CDS-A-nodosum_M_contig1154:12327..124881680866558.5908682-CDS-A-nodosum_M_contig1154:12327..12488Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 12328..12488 +
1680866558.6038036-CDS-A-nodosum_M_contig1154:12752..128641680866558.6038036-CDS-A-nodosum_M_contig1154:12752..12864Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 12753..12864 +
1680866558.611869-CDS-A-nodosum_M_contig1154:13147..138411680866558.611869-CDS-A-nodosum_M_contig1154:13147..13841Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 13148..13841 +
1680866558.62022-CDS-A-nodosum_M_contig1154:14057..142541680866558.62022-CDS-A-nodosum_M_contig1154:14057..14254Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1154 14058..14254 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1154.2.6prot_A-nodosum_M_contig1154.2.6Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1154 2803..14254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1154.2.6

>prot_A-nodosum_M_contig1154.2.6 ID=prot_A-nodosum_M_contig1154.2.6|Name=mRNA_A-nodosum_M_contig1154.2.6|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1431bp
MHLRRFSLNELMVALVEGTESSTIDSNGASSSSWDHEVQAPTSQLPQGPD
PPLADPASLGVFRRVEPRRTAVARGFADLATGRDGNEDERSSMPMQAIAL
DPLGEVIRILRHVMRSEESRPFLGTPTDADVNSEGVVTGHQPRRPLDLGT
ILKRAEDGWYDMDPGSQPPVTSNSSGAGHAGVAQDVELVQEGWLEARGRD
SVIYEQARALVDDFMALYEAHVLKPLGHLERSDREGRCPATKDGNDGDGN
REGFASSLSPPKLDSKLDSMEMLRRMGSEEYSRWSPAVKSRALAMLCDEA
MSSGTLSDVARKVFEARETVDRRDGEMKAAVKDMIRGQQTRESQGLQAPT
STSRRETEAEMVAARLAAEGPELKILRQLGHLRVRLKPLGTDRDRRRYWL
LTQGEDHRVFTQLDYEWGCYERVSQLKALHTWLDRRGARERVLKAAIREH
LTINLGVSPDDLYPPSRPSGLRGRADWSTGEDSTCYEEDRQEHIGEPAEV
AREKERERAAGKEALKSCGFFAEEQRDVLQRQCSAFAVDRHSLRAAGLAF
KRETSAVVMRDVVVHMGPHGLDLWLKKQHGGVVVSKYLELAPDVHPGQAA
GVQVGDLVVSVDSIVAEGPESLRERLIDVHLAKSDKKAIMKVLTRVPLTD
GRGEPLASAMKYSAVDMVKGALLEGEIVLHHSFVIGADWEGQACREWRLG
VSFAGQDVGRSLEHGTLTAAGATSTNSSGRTGQTDGSEAVAFPTGHYPPL
QEIGAIELGPVTEEAVKDAVKQLGKRMLQLEALVSRQDTVVDARWGKEGR
CRKWRTFVHNAQTAAQLLAAWGAFEEMIDWEAASGCFYWTLNRRKFLALL
PENARNEIPDKGNSVIYFGDGHALSVEAEAKAGYRAPWDVDEPEPGAIGQ
FTVKTIEYDQGGSRRSAKGAQPFVTMELEPLTTRNTFPELGLLPPPEPFG
TLNRLLKRSIKAMRGTPDVVHFLEPVSRAIYPDYYDVISEPMDLSTLWKR
CSTCRYKTVEQFKHDLSLVASNCRLYCQDKFPNLPPAADAAVKVGMATLD
EPTLAAALRKMVEDGSRLENVWSTHMLAAISAAPELATMPGMRKIASRQL
GFSTGGDQEAGGDTRESESDDDDGQPDAASIARQVFYDKLVGIKYGTPRP
DKPSITRPQKHEGRNPTKPRPKPEYGGRIGFQEQVTHSIATTRASSSSSS
VVIPEHQPLGLVAKVDPPSSSTEVITPMDVEPEVNTPPNTMTLPSTDRVA
IADITDMETDATGTIPASSITVKSEDEAGSDNALAMTPLAAGSANGVGTP
ASEGDQVEPDSGARPEARTGGTLWVSMRLNNEMPEFVVMASKYKKAVGFE
WRSEMRIRMSSSEETGESSRVHEGMLVGVKQMDKDTGIMPWESLQVEWDD
ETDANTVNPWEVEAASAAMVAARHHPPGGS*
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mRNA from alignment at A-nodosum_M_contig1154:2029..15115+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1154.2.6 ID=mRNA_A-nodosum_M_contig1154.2.6|Name=mRNA_A-nodosum_M_contig1154.2.6|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13087bp|location=Sequence derived from alignment at A-nodosum_M_contig1154:2029..15115+ (Ascophyllum nodosum dioecious)
AGCAGGCGTGAAACTGGGAAGGAGGATATCAGCCTGGCCAAGCGTTACCC
GCTGCCGGACGAGGTGAGTCTCTTTTGCAGCGATGGTTTAGTGGGGTTTC
AACATAGGAGGTGGCGTTCGTGTCTCACCCTACTTGATCGGTGTTAGATG
CGCATGCGACGCCTCGGCGACTCATCGTCTTGCTCTTTGAGGTATGCAGG
GAATCCCACGACGGGTTGTGAAAACCATCCCTGAAAATAGGGACTTGGGC
GTTCGTAAAAGGAGTCGCAGGTTATGTTGCACGCGGCAAACATGTTGCTG
TGGATGCGCTTCACGCTCAGTGGCGGACGAGAGTCCAAAGCTTTGCGCTT
TGATAAGGATCAGTAGAGAATGTTGCACGAAGTGCCCGACTTCGTTTTTT
CAGCAAGAGAATCGACGCACGATTGTTGTGGCGGGGCGACGCGACAGTTA
CCACACGTGGACTTTACCACCGCTGCTGTGCTACTCAAGAGATAGCGCGC
TCTTCCAAAGGTGTTTATTCACCTTTTTCATAGCCTGCGTAATGCTGTAA
TTGAGATTCAGAAAGAGAGAGCGCCTAGCACGTACGTGTCACCCGTTGCT
GGTGTGTACTCATGGCGTGCATGGCAGGAACTGTGGGAAGAAGAGCAGCA
GCTGGGCATACAACCGAGGCCGTGGCCGGCACCCGGGACGTTGCCGATCC
CCCCTGGATTCCCGGCGAGGGCGTTCGAGGATGCTGTTTCTGCCTGGTCA
TGTCTCCAGTTATTTGGTACCCTGATGCACCTGAGAAGGTACGAACTGTA
ATAGTCCTTTCCTCTGCTCTTATCCCCGTTGTCTGTCGCCCGGCAAGATG
TGTGCGTGCCACTATATCAGCCGAGTAAGGGTCGATCGACTTGGTTAATA
CTAGACTAAGCTGCTTGTAGCAGCTGCTTCAAACTGGAGGCCTGCCCTCT
ATGTCTATGTCCTCCTTCTCATGTGCCCTATTAATATTATTAATATTATT
AGTGTGTTGCAGTACTTGGCGATTTTTAGCAACATTCATGAGACCCACGG
TGTTAAGCAGAGTACACGTCCGTTGCGGCCATCGATGACCATGTCCCCAG
GTTCAGCCTTAACGAGCTCATGGTGGCCCTGGTGGAAGGTACAGAGAGTT
CGACTATTGATAGCAATGGAGCAAGCAGCTCCTCTTGGGACCACGAGGTT
CAAGCTCCCACGTCGCAGCTCCCGCAGGGTCCCGACCCCCCGCTTGCAGA
CCCTGCTTCTCTTGTCGACATCATTCCGCCTCCCTCAACCTTCGATGCGG
CCGCAGCGAGTTTGAGTGCTGCACCCCCCGGGGGCGCAAGCAGCCCAACC
CCGAAGCCCGGCACCAGCTTGTTGGCAAACATCCATATGCGTCTCATGGA
CTTCTTGGCGTGGGATCGCGCGCGCACATTGACCTGCGGTCGTGAGGGCA
AGCAAGACGCTTACTGGGGAAGTCTGCTGCCTTCGCTTGGTGGGGGTGGG
GATGGTTCGGGACACGAAGACGTTGGCGCAGGGCACGGCGCCTCAGGGGA
TGACGATGAGTTTGGCGGCGCTCCCGAGACAACACTCGCAGGGCTGCGAG
GCTCGCGGGAGCTTATCCAGGCGAGTCCGCATGGATTTCCCGAGTTGCTG
AGACTCGTGGTGATTCGTAGTCAGGGGGTTTTCCGGCGCGTGGAGCCGCG
ACGCACCGCTGTGGCTCGAGGTTTTGCGGATCTGGCGACAGGACGTGACG
GCAACGAGGATGAGCGGAGTTCGATGCCTATGCAGGCGATAGCGCTTGAT
CCTTTGGGAGAGGTGATTCGCATCTTGCGGCACGTGATGCGGTCCGAAGA
GTCCAGACCCTTCCTGGGCACGCCTACGGACGCCGACGTCAACTCCGAAG
GCGTGGTCACGGGCCACCAGCCTAGGCGGCCGTTGGACCTAGGCACAATC
CTGAAGCGCGCGGAGGATGGGTGGTACGACATGGACCCTGGGAGCCAGGT
GAGATGACGATTAAAGAGGATTGAGGAGGGCGGGTGACGCTCGAAGCTCA
GATTCAACTATTAGCTCTCGTGGCGATCCCTTGCAGGGCCGGAGCTATTA
ATAATTTATCCTGACACGTTGTCCTTTTGTTGCCTTTTGCTGGTATCGCA
CATGCGTGTCGGCAGCCTCCAGTGACGTCCAACAGCTCCGGCGCCGGACA
TGCAGGAGTAGCGCAGGACGTGGAGCTGGTGCAGGAAGGCTGGTTGGAGG
CTAGGGGTAGAGACAGCGTAATCTACGAGCAGGTATTACTTTGTGGCGGG
ACGGATGTGGAGCTCCTTTGACTCTCGTTCGTAATTCGGTGGTGGGGTAC
GCATTACACTGTCAAAGTTTGGCGATCCGAGAGAGGCATGATAAATGGGC
CAATCGAGATACCTATCAATGGTGCAAAAACAATCAAGACATACAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAGAGGCAGTAACGAG
ATACTGTAGACAGAACTGCTGCTAGCTACACTGCCTGCGTGCGCCGCTTT
CATGCATCATAACTGTTTGGCACGTACGCCTTGTCGACCATCGGCTAGGC
ACGTGCCCTGGTTGATGACTTCATGGCGCTCTACGAAGCGCACGTCCTAA
AACCTTTGGGTCATCTAGAGAGAAGCGACCGAGAGGGGAGGTGCCCGGCC
ACAAAAGATGGCAACGACGGCGATGGGAATCGCGAGGGCTTTGCGAGCTC
GTTATCCCCCCCCAAACTCGACTCGAAACTCGACTCCATGGAAATGCTGA
GAAGGATGGGATCCGAGGAATATTCACGGTGGTCGCCCGCGGTGAAAAGC
CGCGCGTTAGCGATGCTCTGTGACGAGGCCATGAGTTCGGGGACCCTGAG
CGATGTCGCTCGCAAAGTCTTTGAGGCTCGGGAGACGGTCGATAGAAGAG
ACGGAGAGGTGAGAAAGAAAAGTAGTTGAACTATCCCTATGGCCTGAGAA
TCGATATGCAGCCGTTGCGTGGGGTGTGGGCCAAGTCTACGTGGATAATC
CATCTTGTACCGAAATGGCGGTGGTCCAATTGTTGCGTTCGGACTTTTTA
TACAATCATAAACGATCGTCGCTGTCATTCCTCATTCCTGTAGAAATCAT
AGTATAGATAGCGTTCCTCGCGCGTGCTTTCGTGTGGCGTGATTGCTGTG
ATGGCGTGTCTTCAGATGAAGGCGGCTGTTAAAGACATGATCCGAGGGCA
GCAGACAAGAGAGTCCCAGGGGTGAGTAGACGTAGACATACCACGATGTG
CGCTGACGTGTCTCAGTTTGACAATCGCGCCAAAACCTTCAACAGTCTTC
GATATTAATAGAGTGATGGGAGTGAACGGTGTGGAGATGAATGATATCTC
AGACTGCTCTTGCCCTCTTGAAGCTGAACTATTTAATAGTAAACACTCCA
ATCATAATGTGCGAACGTCACGTGAAGATGATGTATTTTTACTGTCGTAA
CCTTCTCTGGCGTTAAATGTAGCACATTAAGCCAACCCCCCGGTGATGAA
CACGTAAACCCCAATGGTCTCAATGATCTCCCACCGTCCACTCGTGCGTT
GAAGTCATCACGCTGAAAAACGGCCCACCATTCGATTTGGCGTGGCAGGT
TGCAGGCGCCGACCTCAACTAGTCGCCGTGAAACCGAGGCCGAGATGGTG
GCGGCCAGACTAGCGGCGGAAGGGCCTGAACTTAAGATCCTTAGGCAACT
GGGGCATCTGAGGGTTCGGTTAAAGCCTCTCGGCACTGACCGCGACCGTC
GCCGCTACTGGCTGCTAACTCAGGGAGAGGTGGGCACTCGCGAGCGAACG
TGAACCTGTGGCAATATTGTTCACTCTAGTGAAGTCTTGCTTCGCCCTTT
TGGCGTAGTTTTTGCGCCGAGTTCTTGGAAGTCAATTCTTGGTATGTGTC
TTGTCGTGAACGATCGTTCCAAGTACAACAGTGGCTCTTAGAGCGATCGT
AGATGCATGTGGTGGTGGTCACAATGGCTCAACCGTCCTGTTTTGTATGC
CCTCCACGGTCGAAAGTAGTACTGGTACGTTAAACAACTACTGATGCCGT
GAATAGCTTCATGTTATTAACAAGACAGCTTTTTCTGTACATGATGTCCG
TCGCGCGTTGTGCCGATCTCACATTTTCTGAGACCGTGCCACGCCAAAGC
ACCCGTTTCTTGGCCCTTCATGACAGATTCCAGGATGTTTTATGTTTTGT
TGAGGCCACGCCACGAAGTCGGCTTTGCCATCGCCGTTAACCCCGCTTTG
CCATCATCGTTGTCGTTGTCGCAGGATCACCGAGTCTTCACACAACTTGA
TTATGAGTGGGGCTGCTACGAAAGGGTGTCGCAGCTGAAGGCCTTGCACA
CCTGGCTGGATAGGAGAGGGGCCAGGGAGCGCGTGTTGAAGGTGACGGAC
TAAAGATTTTACAGTGTTTTAATAGAACACGTAGCTCGGCTGCCATAATA
ACTTTTCAAAAACACAAGGCGTACCGTCAACACGTACAGACATGAATCGA
CTCGGTGTGTGTGAGTGTGTGACGCAAATAATGTCGAATGGCGTACATAT
TTGGGGGACAAACGATTGTTGATTGTCGTATCCGATGGATCGTGTTACCT
ACCGTATAATATTATAGTTCGGCGTGAAAAAGCAAGGGTAGGGTAGGGTA
GGTCTCCAGGGCAAGGGGTGCTTGCAACAACGAGAGGCGTACACTGCGTT
CGATCTTCAAAGAGCTAAGCTCGCGGCCCGCACGTTCCGGCGTGAGAGCG
CGTTGCAGCTATTCGTTCTGTTTCTTTTTTTTCCCCGTGGCAATTGAAAG
CGCTGATTATCGGCTTTTCCTGCAGGCCGCAATTCGAGAGCACCTGACGA
TAAATCTGGGAGTTTCTCCAGACGACCTGTATCCCCCGAGCAGGCCATCC
GGCTTGAGGGGGCGAGCCGACTGGAGTACGGGCGAGGACTCCACATGCTA
CGAAGAAGATCGTCAGGAGGTCCGTTGCAATGGTGCCCGAGCCGCCGTTT
GCCGCCGCGATGCTCCGATCTTTCCGCCCGGCCCGCCTTTGTTTTCAAGG
ACTTGAAACCTGAGGCTGGTTCCATTTGAGTTAGTTCCGAACCTTTGTAG
TAGAGCTAGGGTGGGGAGTGGTTTCTTTCTCTAGCCAACGATCTGGTCAT
CGTGCATTGTGCCGAAAAACTAACGCCGGGCGCTATCGGTTGGCCTTGAA
GTGAAAAATTCCTATCTTCCGCCCGCGGTTCCCGCTTCCGACCGTTTTCC
CTTCTTGGTCTTGTCTTCTAAAGCCGGCCACAGTGTGTATGCATGTACTT
GTGTACAGTTATATATCATAGCAGAGTATGCAGCAACCAGATACGGTTGC
CAAATCCTGCTCGTGGTAAAAGCAAAGCTGAACAGAGGAAATTGATTTTT
CCCAGTCCCCGTTCGCGCCTGACTACACTCCATCGTGTCACCAGTGAGTA
CCTTCCTATATCCAGACTAATACAGTACCTGGTATGTGATTGCCTCACCG
GGGTTTGGCTTTTTTTTTGTGTATAGCACATCGGAGAGCCGGCGGAAGTC
GCTCGCGAGAAGGAGCGAGAGCGAGCAGCCGGAAAGGAGGCTCTCAAGTC
TTGCGGCTTCTTCGCTGAAGAACAACGGGACGTGCTTCAGCGGCAATGCA
GGTGACGCGGATGGTACCATCACCATGCGCGTGGCCGTCAGCACTTTGCG
ATGGCCTCGACAAAACGGGTCTCATGCTGCTCCTTTCTACGGTCGGGCGT
CCGCGTAGCTGTATCCCTTCGCAAGTCGTGCCGACGGGAGATGACGGATT
TTGGCAGCACAGCCTGTGCGTATAGTGCGGGGGTTATATATATATATAGT
AAATAATGAGGGAAAGCTTCTTGGTTGCGTTGGGTGGCAGATGGGGAATC
TGATCGTGGTGACGTCGGGCTTGCGCCCAGTGAAACGCCTCCGACTTGTG
CGTCGTTACCAGTGTGCGTCTCTTCGCCCCTATTCCGCCGCCCCTCGTGG
TCAGCGCTTTCGCCGTGGATCGGCACAGCCTACGCGCGGCCGGACTGGCC
TTTAAGCGCGAGACGTCGGCCGTGGTCATGCGCGACGTCGTTGTTCACAT
GGGGCCTCACGGGCTGGATCTGTGGCTAAAGAAACAGCACGGTGGCGTTG
TGGTGTCCAAGTACCTTGAGCTCGCACCTGACGTGCACCCAGGACAGGTG
GGAAGAAAATCACGGCAACGTGGGGACGTAGCGGGGCGATCGGTAACCGT
AGAGAGATGGTTTCTTTTAGGATTCGACGCTTGCTTTGCAGGCATCAGCA
TTCTATCCCTTTGATCAATTCCTATTGTCGCCGTCGTTGTCGTTGCCGTT
GTCGTTGTGACCGTCTGCCCTTGCAGCAATTGTCGTACTGTATGTCTCTT
CCGAGGTGCAACCATGGCGTTCTAACGTACAGTAATTTGGCACTGTATTG
TACGCAGGCATGGATTTGGTATAGGTCGTGTGCGCTTCGACGTGAGGCAA
TGGCAAACCTACCCGTGGCGACGCTACTTGGTACCAGGTAGCATACTCTT
GTATCTCTCTTAGTCTCTCAAACGCGTGACATTACAGGCGGCGGGCGTGC
AAGTCGGGGACTTAGTTGTATCGGTCGACAGCATCGTGGCGGAGGGGCCT
GAGTCGTTGCGCGAACGGTTGATCGATGTACATCTGGCGAAATCGGACAA
GAAGGCCATAATGAAGGTGAGCCTCAACATTCGTCGTGGTGAATGCTCGT
GTTTTTGATTGAAAATGCCATGGAAAGCAGTGTTCGGACTGAACAAAACG
TTGGGCTGAGCAATTCTTAGCTTGTGGGTTACGTGGCGACGCGACCTCGC
TGCAGCTTGACTTGACTTGCTTTTTTGTCGTTTGTTTGGCTCAAAATGTG
ACGACGCTCTATCCAGGTATTGACACGAGTGCCGCTGACGGACGGACGAG
GAGAGCCACTGGCGAGCGCGATGAAGTACAGCGCAGTGGACATGGTCAAG
GTCAGAACAGAAACCCTTTGCTCCGGTAGTTCTCATCATGATCGATTCTC
CTGATGTTGCCGACACTGAGAAAAGGGCAACTTTCTCGATGTACTGCTGC
ATCGTTGTGGTACGTCCGGAGCGCGGTCGATGTGTTACGACGGACGGCTC
TTCTGAAGGCAACAGCTAGTCCTAGTGGGCCGTATCCCATTCCATCCGTG
ATCGGGGTACGAGTGGAGCGACCACCTGCACACAAAACACAACATTTGGG
CTGCTTGACACGGGTGCTATTTACTAAGTATTATTTATTGCAGTTCAATA
TTACTAGTTCAATCGACTACTTCTCGAGTAGTGCGTTGGTTTTGACACAA
GAGAGGTCAACGTGCATATAAACCCTCCCCCCGCGCCCCGAGCGAAAGTG
CTTTCGCCGTTGTACATGGCAGTCAGTCCCCACGGTCGCGTCATGACGAG
AACGCGTCCTCTCCCCGACTGTTTCCATTTCCTCTCCTACACTCTCCTCG
CCGCTCTACCTTAACAGGGCGCGCTGCTGGAAGGAGAAATAGTGCTGCAC
CACAGCTTCGTGATTGGGGCTGACTGGGAGGGTCAGGCCTGCCGTGAGTG
GAGACTGGGGGTTTCATTCGCTGGGCAAGACGTTGGCCGGAGCTTGGAGC
ACGGGACGTTGACTGCCGCGGGGGCCACATCGACGAATTCCTCGGGCAGA
ACTGGGCAGACGGATGGAAGTGAAGCCGTGGCGTTCCCGACGGGACACTA
CCCGCCTTTACAGGAAATAGGCGCGATCGAGCTGGGGCCTGTCACTGAGG
AGGCCGTGAAGGATGCAGTGAAGCAGCTAGGGAAGAGGATGCTGCAGCTG
GAGGCTTTGGTCTCCAGGCAGGACACGTGAGCAACGTGTAGCTCGTCTGG
TCGTGGCGCAGCTTGCCTGTTTTTCTCCGAATCGCTTCCTGCTTGACGCG
ATGTTTCCGTGATCGGTCGTGCGTAATGTGAACGAGACGGCCTTCAACGA
AAGGGCCCTTACTCTAAACGTCGGTGTATCCGCGTCTGTTAAAGTACCGT
TCGCCCGCCTTCCCTTGATCCCTTGATGGCTGTAACCTTCAGAGTGGTGG
ATGCGCGTTGGGGGAAAGAAGGCCGGTGCCGTAAGTGGCGGACTTTTGTT
CACAACGCGCAGACGGCTGCTCAACTTCTGGCAGCATGGGGGGCTTTCGA
AGTGAGTCATTCTGCTGAATTTTCGACGTAGGAGGAACCACGTGTAACAA
TCTGCTGTAGTCTGGGGTTTACCCCCGGAATTAGGCTTGCCCTTAACGCT
TCAACCACCAATCTTTGGTATGCTCATCTCCTTGCCGCTACTACCAACAG
TATTTACATCCTCGAATCTTGGGAGTGCCTGAAGCGAAGGTGCTCTTGCT
TGTTGACCGGTGCATTGCACAGGAAATGATCGACTGGGAGGCAGCGAGCG
GATGCTTCTACTGGACGCTCAACCGCCGAAAGTTTCTGGCGCTCCTGCCG
GAAAATGCGCGGAACGAAATACCGGACAAGGGTAACAGCGTGATTTACTT
CGGCGACGGGCACGCGCTCTCTGTCGAAGCCGAGGTGTGTACAGCAGTGT
CTTTAGAAATGCTTGAATAGTGTCCTTGGGAAGAGTACTTGCCTACCCCA
GTCTAAGTACCCGACCGGGTCGGACTTCTAAGGGTATTATGGAGAAGTCC
CAAAGTGCGTTGCCAGATTGACATGGCGTCCGGTGGTTTATCGCTCTCCA
TATTGGTCGGATATAGCCCTTTTCTAATACCCGCCCTCATTCGTTTCATC
GCGAAACTTTCGGGGGGGTTTTTCTCAGGCAAAGGCTGGGTACAGGGCCC
CGTGGGATGTCGACGAGCCGGAGCCAGGAGCAATTGGACAATTCACGGTG
AAGACTATAGAATACGACCAGGGAGGATCACGCAGGAGTGCCAAGGGGGC
GCAACCATTCGTGACGATGGAGCTGGAGGTGACGCGATGGACGCGCCAAA
CGTCGGGGTTCGGGGCGTTGTTTTGGCATCTTCCTTGTCAGAGCTGTGGT
GGCGCTGCATAGTGTTCGTGACCTCCCCCCTACCTCCTTCCCTTCCCCTT
TAGCCTTGGCGTTGGCTTTGGCTTTTGGAATTGTTGTGCAGTTTTTCGTG
ATCAAGTTTACCTACTGCTAGATCTTTTGTAGATGGGACTGTGGCGGTAG
TTGCTTGAAGCGGCGTCCAACTTTTTCTAGCTCCTTAGCTTTATAGTATA
ATTTTACCATGAAGCATGCGCTTAAAGACTGCACGCTAACCTTTGCAACT
TTCGGTAACCCGCGTTGCGTGACATCAATCCCAGCCATTGACGACACGAA
ATACGTTCCCCGAGCTGGGGTTGCTTCCGCCGCCGGAGCCTTTTGGCACT
CTTAATCGCCTTCTTAAGAGATCCATAAAGGCCATGAGGGGGACGCCAGA
CGTTGTGCATTTTCTTGAGCCTGTAAGCAGGGCGATATATCCAGGTGAGA
TTACCATCCCACGACATGCGGCTCCCCTCTCCCGCCACCCGTTCGCAGAC
AACAAGTTGAAGTCGACGGGGTGAAGCTTGAGAGTGCTCGACCCACCCGA
CCCGGCCGACGAAACCTATGAATAGCTCTATGAATAGCTCTAGTTGGTAC
GGCATTATATTAATAGTTGGATATGATGAGTTATGATGCCTTCCGACGCA
TGGTGTCTGCTGTGACGCCGTTGCTTCCGGACTTACAGACTACTACGACG
TCATCTCGGAGCCGATGGATCTAAGCACATTGTGGAAACGCTGCTCCACT
TGCCGCTACAAGACGGTGGAGCAGTTCAAGCACGATCTGTCGCTCGTGGC
TTCCAACTGTCGACTGTACTGTCAGGACAAATTTCCTAACCTTCCCCCCG
CGGCAGATGCAGCCGTTAAGGTGAGAAAGTGGGGGTGGTGCTTGACTGGG
TGCCTGCACTGCACGAGGTTGTAAGTCTCTCTCGTGCACCGTCTTGCTTT
ATATATTCCCCATTTTGGGATGTCTTGCAAGCACAAGTGTTTCCACCTCT
TTTGTAAGTACCCTCGGTAGTGTTACCCCCTAACGTATTGACCATCTACA
GACTTTAAACGTCCGTGTGTGTTATTCAGAGACCATTTGAGAACAGCTTG
TCCGCTTTTTTTGAACATATTTGAGGTGCAGCGGCCACAATGTTGACGGT
GGTGGTGGTGACTCAGCGTCTCGTCCTTGTCGCTTCCGGAAATGCTCAGG
TGGGTATGGCTACGCTCGACGAACCCACTCTTGCAGCGGCTTTGCGCAAA
ATGGTGGAAGACGGAAGTCGCCTGGAGAACGTATGGAGTACGCACATGTT
GGCGGCGATTAGCGCGGCACCCGAACTGGCGACCATGCCGGGGATGCGGA
AGATCGCGAGGTATGGTGGGCCTGAAGCCCGCATGTGGCGTTCATGAAAC
TAGGGTACTGGTTACCTGTAGCATTTTGTGGTTAGAGCCCATCTTTACGT
GGACGTTTACCTGAGAAAGTTCCGCAAGTTGCGAGCTCCGGGATCTCAAG
TTCCCTCTTTTTCTGCATAGCGTATCAGGTTACGTGGGCGTTCAGAGCGA
GGAACCTGCACAGCTTAGAGGTGTGATTGTGACGTGATTGCGTTTGTAAA
CATCGTGTCGACCCTTCAATCGAGCAGGCAGTTGGGGTTTTCCACTGGAG
GCGATCAGGAAGCGGGCGGAGATACGAGGGAAAGTGAAAGCGACGACGAT
GACGGCCAGCCGGACGCGGCAAGCATCGCACGGCAGGTGCGTGTGTGGAC
TTTGTCCGCTCTTTGCGACCCTTGGACATTCGGTAACACGCTTCGTATTT
CTTGTTTTACAAGCGTTGGCATGTTATCGGATTCATGCGCTTGCTTGACA
CTCCAAGGATGCGCTCGACGAGAAATGCCCTTTCACCTAGCGTCAACGGA
CGTGGTGGAGTGTTTTTGGTTGCTGAGATTTTGGTGGTCCTTTATCTCGA
CTTCGTATCCGGTGTCTCTTGCCGAACGCGATCGCCCCGCGTCAATCGTC
CGCGCGATCCTTTTCCCAGGTGTTCTACGACAAGCTCGTCGGGATCAAGT
ACGGAACACCAAGGCCCGACAAGCCTTCGATCACGCGTCCTCAAAAGCAT
GAAGGACGGAATCCCACGAAGCCGCGACCCAAACCAGAGTATGGGGGAAG
GATCGGATTCCAAGAGCAAGTCACGCATTCGATAGCAACAACGCGTGCGT
CGTCTTCATCGTCGTCGGTCGTGATTCCCGAGCATCAACCGCTCGGCCTT
GTTGCGAAAGTTGATCCCCCATCATCGTCGACAGAAGTGATCACGCCGAT
GGACGTCGAACCAGAAGTAAACACGCCGCCGAATACAATGACGCTACCGT
CCACCGATCGGGTTGCTATAGCCGACATAACCGACATGGAAACCGACGCC
ACAGGAACTATTCCGGCCTCGTCAATAACGGTCAAGTCGGAAGATGAGGC
GGGTAGTGACAATGCTTTGGCAATGACTCCATTGGCGGCTGGATCGGCGA
ATGGAGTGGGGACACCGGCGAGCGAAGGCGATCAGGTTGAGCCTGACTCT
GGTGCTCGGCCCGAAGCTCGGACTGGTGGGACGCTGTGGGTTTCCATGCG
ACTTAACAATGAAATGCCGGAGTTCGTCGTCATGGCCTCGAAGTACAAAA
AGGCCGTTGGCTTCGAATGGAGATCGGAGATGCGTATACGCATGTCCTCC
TCGGAGGAGACAGGTACGGGTAATGTGGTTGGCTGACAAAAGAGCGAGCA
CCATAACGCACCGATACCTGTTTTTGTCGGAATCTGTGGCTCTAGAGGAA
CGGTTGGCACAGTTAGCGATTATTCCAGAGCTTGTTTGCATTCGTTTCTG
TCTGCAGGAGACAAAATATATTTGCGTCAAACGTCGCCCCCGCTTCTTTG
CCCTCAATGCTGAACTGCTGCGACCGCAGGGGAGTCTTCCCGAGTGCATG
AGGGCATGCTGGTGGGAGTTAAGCAGATGGACAAGGACACGGGGATAATG
CCGTGGGAAAGTCTTCAGGTAGAATGGGACGACGAGACAGATGCCAATAC
GGTAAACCCGTGGGAGGTAGAAGCTGCATCGGCTGCTATGGTGGCCGCGC
GTCACCACCCCCCGGGGGGTAGTTGAGGCTCTTTTCGTGTTGCCACCTGT
TGGGAGTACTTCCACGAGCATGGCTTGTGTGTGGCGTGTTGTGCGAGAAC
CTTCGGCGATCACTTCCCGAAGTTGTATGTGGGAGGTTTTGGCCTGTGGT
GGGCAGTTCCTCGAACACAACGTCGTGTGTATGGCGTGAAGTCGGAACTC
ATACTGAAATGGCCTGTGGGGCAAGTATTTTGATGATGTCATAGCGTGTG
TTTAGCGTATTGTTGTTGGAGCACATGGTGCGAGCGATCACCTCTTGTAG
CTGTTACTAATAATACTAGTACTTGACGGACTTGTGTGTAGGGAATAGTA
TTTTCCCATGGAAAGCTTGATCATGACACAGCAGCGCCTTATTATTACGA
CGACTTTATCTAAACCCGCACACACACAGCGGCAGCAGTTAGTTGTACAA
AACAATTCAAAACAAATTACAGTGCAGTACATAGTCTAATTAAACAGGTA
GTTATAATAATGATATACGACAGAAATATAAAAATGCCATCGAACCAACA
GTATAATGTCGGGGGGAAACCACACCGTTATACTATGCAATCGCATTAAT
CGCCATGCAGGTACACCAAAACAGTTAGTATAATGATCAGATAAGAGGCA
AAAGCACACGGAGAACCTGGATATCAGTCGGTTGCATGTATAACCGCCTA
GTTTCAACATGCtataaCCACGTCATACCAATATTGGGTGTGGGACAGAG
AGACGCATATTAATTGGTCCATGGTGACCTGCCAAGGCGGCACCCGTTTG
GAACTACCTTGAGGTTTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTGA
ACGCCATCGATACGCAATTGCGAGACCCGATAAACTC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1154:2029..15115+

>mRNA_A-nodosum_M_contig1154.2.6 ID=mRNA_A-nodosum_M_contig1154.2.6|Name=mRNA_A-nodosum_M_contig1154.2.6|organism=Ascophyllum nodosum dioecious|type=CDS|length=4293bp|location=Sequence derived from alignment at A-nodosum_M_contig1154:2029..15115+ (Ascophyllum nodosum dioecious)
ATGCACCTGAGAAGGTTCAGCCTTAACGAGCTCATGGTGGCCCTGGTGGA
AGGTACAGAGAGTTCGACTATTGATAGCAATGGAGCAAGCAGCTCCTCTT
GGGACCACGAGGTTCAAGCTCCCACGTCGCAGCTCCCGCAGGGTCCCGAC
CCCCCGCTTGCAGACCCTGCTTCTCTTGGGGTTTTCCGGCGCGTGGAGCC
GCGACGCACCGCTGTGGCTCGAGGTTTTGCGGATCTGGCGACAGGACGTG
ACGGCAACGAGGATGAGCGGAGTTCGATGCCTATGCAGGCGATAGCGCTT
GATCCTTTGGGAGAGGTGATTCGCATCTTGCGGCACGTGATGCGGTCCGA
AGAGTCCAGACCCTTCCTGGGCACGCCTACGGACGCCGACGTCAACTCCG
AAGGCGTGGTCACGGGCCACCAGCCTAGGCGGCCGTTGGACCTAGGCACA
ATCCTGAAGCGCGCGGAGGATGGGTGGTACGACATGGACCCTGGGAGCCA
GCCTCCAGTGACGTCCAACAGCTCCGGCGCCGGACATGCAGGAGTAGCGC
AGGACGTGGAGCTGGTGCAGGAAGGCTGGTTGGAGGCTAGGGGTAGAGAC
AGCGTAATCTACGAGCAGGCACGTGCCCTGGTTGATGACTTCATGGCGCT
CTACGAAGCGCACGTCCTAAAACCTTTGGGTCATCTAGAGAGAAGCGACC
GAGAGGGGAGGTGCCCGGCCACAAAAGATGGCAACGACGGCGATGGGAAT
CGCGAGGGCTTTGCGAGCTCGTTATCCCCCCCCAAACTCGACTCGAAACT
CGACTCCATGGAAATGCTGAGAAGGATGGGATCCGAGGAATATTCACGGT
GGTCGCCCGCGGTGAAAAGCCGCGCGTTAGCGATGCTCTGTGACGAGGCC
ATGAGTTCGGGGACCCTGAGCGATGTCGCTCGCAAAGTCTTTGAGGCTCG
GGAGACGGTCGATAGAAGAGACGGAGAGATGAAGGCGGCTGTTAAAGACA
TGATCCGAGGGCAGCAGACAAGAGAGTCCCAGGGGTTGCAGGCGCCGACC
TCAACTAGTCGCCGTGAAACCGAGGCCGAGATGGTGGCGGCCAGACTAGC
GGCGGAAGGGCCTGAACTTAAGATCCTTAGGCAACTGGGGCATCTGAGGG
TTCGGTTAAAGCCTCTCGGCACTGACCGCGACCGTCGCCGCTACTGGCTG
CTAACTCAGGGAGAGGATCACCGAGTCTTCACACAACTTGATTATGAGTG
GGGCTGCTACGAAAGGGTGTCGCAGCTGAAGGCCTTGCACACCTGGCTGG
ATAGGAGAGGGGCCAGGGAGCGCGTGTTGAAGGCCGCAATTCGAGAGCAC
CTGACGATAAATCTGGGAGTTTCTCCAGACGACCTGTATCCCCCGAGCAG
GCCATCCGGCTTGAGGGGGCGAGCCGACTGGAGTACGGGCGAGGACTCCA
CATGCTACGAAGAAGATCGTCAGGAGCACATCGGAGAGCCGGCGGAAGTC
GCTCGCGAGAAGGAGCGAGAGCGAGCAGCCGGAAAGGAGGCTCTCAAGTC
TTGCGGCTTCTTCGCTGAAGAACAACGGGACGTGCTTCAGCGGCAATGCA
GCGCTTTCGCCGTGGATCGGCACAGCCTACGCGCGGCCGGACTGGCCTTT
AAGCGCGAGACGTCGGCCGTGGTCATGCGCGACGTCGTTGTTCACATGGG
GCCTCACGGGCTGGATCTGTGGCTAAAGAAACAGCACGGTGGCGTTGTGG
TGTCCAAGTACCTTGAGCTCGCACCTGACGTGCACCCAGGACAGGCGGCG
GGCGTGCAAGTCGGGGACTTAGTTGTATCGGTCGACAGCATCGTGGCGGA
GGGGCCTGAGTCGTTGCGCGAACGGTTGATCGATGTACATCTGGCGAAAT
CGGACAAGAAGGCCATAATGAAGGTATTGACACGAGTGCCGCTGACGGAC
GGACGAGGAGAGCCACTGGCGAGCGCGATGAAGTACAGCGCAGTGGACAT
GGTCAAGGGCGCGCTGCTGGAAGGAGAAATAGTGCTGCACCACAGCTTCG
TGATTGGGGCTGACTGGGAGGGTCAGGCCTGCCGTGAGTGGAGACTGGGG
GTTTCATTCGCTGGGCAAGACGTTGGCCGGAGCTTGGAGCACGGGACGTT
GACTGCCGCGGGGGCCACATCGACGAATTCCTCGGGCAGAACTGGGCAGA
CGGATGGAAGTGAAGCCGTGGCGTTCCCGACGGGACACTACCCGCCTTTA
CAGGAAATAGGCGCGATCGAGCTGGGGCCTGTCACTGAGGAGGCCGTGAA
GGATGCAGTGAAGCAGCTAGGGAAGAGGATGCTGCAGCTGGAGGCTTTGG
TCTCCAGGCAGGACACAGTGGTGGATGCGCGTTGGGGGAAAGAAGGCCGG
TGCCGTAAGTGGCGGACTTTTGTTCACAACGCGCAGACGGCTGCTCAACT
TCTGGCAGCATGGGGGGCTTTCGAAGAAATGATCGACTGGGAGGCAGCGA
GCGGATGCTTCTACTGGACGCTCAACCGCCGAAAGTTTCTGGCGCTCCTG
CCGGAAAATGCGCGGAACGAAATACCGGACAAGGGTAACAGCGTGATTTA
CTTCGGCGACGGGCACGCGCTCTCTGTCGAAGCCGAGGCAAAGGCTGGGT
ACAGGGCCCCGTGGGATGTCGACGAGCCGGAGCCAGGAGCAATTGGACAA
TTCACGGTGAAGACTATAGAATACGACCAGGGAGGATCACGCAGGAGTGC
CAAGGGGGCGCAACCATTCGTGACGATGGAGCTGGAGCCATTGACGACAC
GAAATACGTTCCCCGAGCTGGGGTTGCTTCCGCCGCCGGAGCCTTTTGGC
ACTCTTAATCGCCTTCTTAAGAGATCCATAAAGGCCATGAGGGGGACGCC
AGACGTTGTGCATTTTCTTGAGCCTGTAAGCAGGGCGATATATCCAGACT
ACTACGACGTCATCTCGGAGCCGATGGATCTAAGCACATTGTGGAAACGC
TGCTCCACTTGCCGCTACAAGACGGTGGAGCAGTTCAAGCACGATCTGTC
GCTCGTGGCTTCCAACTGTCGACTGTACTGTCAGGACAAATTTCCTAACC
TTCCCCCCGCGGCAGATGCAGCCGTTAAGGTGGGTATGGCTACGCTCGAC
GAACCCACTCTTGCAGCGGCTTTGCGCAAAATGGTGGAAGACGGAAGTCG
CCTGGAGAACGTATGGAGTACGCACATGTTGGCGGCGATTAGCGCGGCAC
CCGAACTGGCGACCATGCCGGGGATGCGGAAGATCGCGAGCAGGCAGTTG
GGGTTTTCCACTGGAGGCGATCAGGAAGCGGGCGGAGATACGAGGGAAAG
TGAAAGCGACGACGATGACGGCCAGCCGGACGCGGCAAGCATCGCACGGC
AGGTGTTCTACGACAAGCTCGTCGGGATCAAGTACGGAACACCAAGGCCC
GACAAGCCTTCGATCACGCGTCCTCAAAAGCATGAAGGACGGAATCCCAC
GAAGCCGCGACCCAAACCAGAGTATGGGGGAAGGATCGGATTCCAAGAGC
AAGTCACGCATTCGATAGCAACAACGCGTGCGTCGTCTTCATCGTCGTCG
GTCGTGATTCCCGAGCATCAACCGCTCGGCCTTGTTGCGAAAGTTGATCC
CCCATCATCGTCGACAGAAGTGATCACGCCGATGGACGTCGAACCAGAAG
TAAACACGCCGCCGAATACAATGACGCTACCGTCCACCGATCGGGTTGCT
ATAGCCGACATAACCGACATGGAAACCGACGCCACAGGAACTATTCCGGC
CTCGTCAATAACGGTCAAGTCGGAAGATGAGGCGGGTAGTGACAATGCTT
TGGCAATGACTCCATTGGCGGCTGGATCGGCGAATGGAGTGGGGACACCG
GCGAGCGAAGGCGATCAGGTTGAGCCTGACTCTGGTGCTCGGCCCGAAGC
TCGGACTGGTGGGACGCTGTGGGTTTCCATGCGACTTAACAATGAAATGC
CGGAGTTCGTCGTCATGGCCTCGAAGTACAAAAAGGCCGTTGGCTTCGAA
TGGAGATCGGAGATGCGTATACGCATGTCCTCCTCGGAGGAGACAGGGGA
GTCTTCCCGAGTGCATGAGGGCATGCTGGTGGGAGTTAAGCAGATGGACA
AGGACACGGGGATAATGCCGTGGGAAAGTCTTCAGGTAGAATGGGACGAC
GAGACAGATGCCAATACGGTAAACCCGTGGGAGGTAGAAGCTGCATCGGC
TGCTATGGTGGCCGCGCGTCACCACCCCCCGGGGGGTAGTTGA
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