mRNA_A-nodosum_M_contig1142.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1142.7.1
Unique NamemRNA_A-nodosum_M_contig1142.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 2.260e-136
Identity = 229/483 (47.41%), Postives = 286/483 (59.21%), Query Frame = 2
Query:  140 MTRMIAVLLTCFAPSVLAASPPGSSLRRSQEDTEATVVAP---RRLSTSDLAPAEDEDGYYAHLGCYMDK-KDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRL-IDESPEPAXXXXXXXXXXXXXXXXSTAEVGSVNYANSKYPFDG----TTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPG-APYPLYGAQRVKTTTMMGKTATQEVSL 1558
            MTR+ A LL C  P         +SL  S    E    A    R LS S           Y HLGCY+D    +    + LV D +T ELC++ C+  GAF+M TQ GNEC CSRE DLD+   + GVCD+PCAGD +E CGG    DLY+L   D P   EY  C++D  E RVM +M + + MT+ +CRDHC+  +A+YYATQYG+EC+CG S    DYE +G GTCHM CAGD+ +ACGG +AFSL++   D  P+PA                 +    S++ A SK P  G    TTF GDGTYY   S GNC      P +Y GM PVALNAAQYG S +CG+C+EGEG+G G G NPI G+FK ++MDKCPEC  GDLDF    DGRWDI W+FV CPG      + E +  YYWKIQPRGT TPV  LT+ G + ++TDDN FE+   +  P Y  Q V TTT+ G     E+S+
Sbjct:   65 MTRLAAALLVCATPV--------ASLETSLRGAEVAAAAGGARRGLSGSSYES-------YEHLGCYVDNGMVNSSPHLPLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKFGADGMPDPAVPDVSEPPSEPAPEPVVSTPAPSMSEAESKTPISGGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMT-PYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 1.110e-130
Identity = 234/513 (45.61%), Postives = 295/513 (57.50%), Query Frame = 2
Query:  140 MTRMIAVLLTCFAPSVLAASPPGSSLRRSQEDTEATVVAPRRLSTSDLAPAEDEDGYYAHLGCYMDKKDDRVLG-MKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRL-IDESPEPAXXXXXXXXXXXXXXXXS------------------------------------TAEVGSVNYANSKYPFDGTTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEV--PGAPYPLYGAQRVKTTTMMGKTATQEVSL 1558
            MTR+ A LL C  P         +SL  S    E +    RR  +     A      Y H+GCY+D         + LV + +T E+C++ C+  G+F+M TQ GNEC CSRE DL +   D GVCD PCAGD  E CGG    DLY+L    TP   EY+ C++D  E RVM +M + + MT+ +CRDHC+  +A+YYATQYG+EC+CG S    DYE +G GTCHM C GD+ +ACGG +AFSLY+   D  PEP      XXXXXXXXXXX                                     ++  G  + +  +Y   G TF+G+GTYY  TS GNC      P +YDGM PVALN  QYG S +CGAC+EGEG+G G+GS+P+ G+FK ++MDKCPEC+ GDLDF    DGRWDI WKFVECP     SF  E   EYYWKIQPRGT TPV  LT+ G + ++TDDN FE+  P    P Y  Q V TTT+ G     E+S+
Sbjct:    1 MTRLAAALLVCATPV--------ASLETSLRGAEVSAGGARRGLSGSSYEA------YEHVGCYVDNGMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADGMPEPDVPESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGGGGDVSGGEY---GITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGD-PWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 4.300e-69
Identity = 113/193 (58.55%), Postives = 137/193 (70.98%), Query Frame = 2
Query:  980 NYANSKYPFDGTTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL 1558
            +Y+  +Y   G  +SG+GTYYG T+ G C+    +P MYDGMIPVALNA QYG S +CGAC+EG  SG+G+G+NPI  +FKA++ DKCPEC  GDLDFS SGDGRWDI WKFV CPG  T SF+   ++ YYWK+QPRGT TPV+ LTVDG S  +T DN FEV        GAQ V TTT+ G T T EVS+
Sbjct:   98 SYSGGQY---GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEET-SFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 2.530e-68
Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = 2
Query: 1001 PFDGTTFSGDGTYYGET--SDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL 1558
            P+D   FSGD TYYG T   DGNCAIRSP+P MYDGMIPVALN  QY  S +CGACIEGEG G G G +P+ G+FKAYV D+CPEC  GDLDF+  GDGRWDISW FV C G +  +F+FEGS+E+YWKIQPRG ++PV  L ++G    +++DNFF + G P+   G Q V T T++ K   Q V++
Sbjct:   36 PYD-EQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFD--GEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 6.830e-66
Identity = 116/216 (53.70%), Postives = 153/216 (70.83%), Query Frame = 2
Query:  269 STSDLAPAED--EDGYYAHLGCYMDKKDDRVLGMK-LVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRH-DVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRLIDESPEP 904
            S+ D + +E     G Y H+GC+ D + DRVL    L+  D+TAELC+E C+  GA YMATQ+G EC+CSR+G LD+DRH D GVCD PC GD+SE CGG ++F+LY L W   P D EY+ CY D+  +RV+S+M  SDDMT+A+CR+HC DK+A YY TQ+  ECWCGTSD  ADYE++G+G CHM C+GD + ACGG  A+SL++  +    P
Sbjct: 1129 SSDDFSESEPGGRPGAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAP 1344          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 2.080e-59
Identity = 105/194 (54.12%), Postives = 140/194 (72.16%), Query Frame = 2
Query:  308 YYAHLGC--YMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRH-DVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYR 880
            Y+A L C  ++ K+    +   L+  D+TAELC+E C+  GA YMATQ+G EC+CSR+G LD+DRH D GVCD PC GD+SE CGG ++F+LY L W   P D EY+ CYAD   +RV+ +M  SD+MT+ +CR+HC DK+A YY TQ+  ECWCGTSD  ADYE++G+G CHM C+GD + ACGG  A+SL++
Sbjct:  797 YFAGLACLPHLAKQPLHHVRSGLISSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFK 990          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 211 bits (538), Expect = 3.630e-58
Identity = 95/162 (58.64%), Postives = 119/162 (73.46%), Query Frame = 2
Query: 1016 TFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVP---GAPYPL 1492
            TF GDGTYYG T+ GNCAIRSP+P MY GM+PVA+N AQY  S+ CGAC+   G G G+G+NP+ G+FKAYV D+CPEC  GD+D SKSGDGRW + W+F+ CPG     F+FEGS+ +Y K+QPRG KTPV   +V+G  G+KT DNF+ +    G  YPL
Sbjct:   23 TFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWV-FFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPL 183          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 7.260e-58
Identity = 102/187 (54.55%), Postives = 126/187 (67.38%), Query Frame = 2
Query: 1019 FSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL*RIALSR 1579
            F G+GTYYG T+ GNCAIRSP+P MY+GM+PVA+N AQY  S  CGAC++  G G G+G+NPI G+FKAYV D+CPEC  GD+D SK GDGRW + WKF+ CPG     F+FEGS+ YY K+QPRG KTPV  L+V G  G+KT DNF+ V        G  R   T  M +T   E    ++A SR
Sbjct:   29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFV-FFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNG-----GGFRFPITVQM-RTVLNEWITVQLAYSR 208          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 3.950e-51
Identity = 92/202 (45.54%), Postives = 137/202 (67.82%), Query Frame = 2
Query:  302 DGYYAHLGCYMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSN-MYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRLIDESPEP 904
            D  Y+++GC+ D K+DRV         +T  +C EYC    A YMATQ+G EC+CS + ++++DRH  GVCD  C GD ++ CGG+ AFDLY++  P  PT  EY+ C+ADD E+R++ + + +  DMT A+CR +C++++A +YATQYG ECWCG S+   DY+++G+G+C   C+GD + ACGG  AF+L++  D   EP
Sbjct:  430 DEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKF-DGIAEP 630          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 188 bits (477), Expect = 9.140e-51
Identity = 88/172 (51.16%), Postives = 114/172 (66.28%), Query Frame = 2
Query: 1010 GTTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECP-GSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTT 1522
            G T +G+GTY+G T+ GNCA+  P+P  Y G++ VA++ A Y GS  CGAC+   GSG+GAG+NPITG+F AYVMD+CPECA GDLD +  GDGRW +SW  V CP     P F+ EGS+ +Y K+Q RG   P   ++V GA+ ++T DNFF V  A  PL     V  TT
Sbjct:   45 GQTGAGEGTYFGPTTRGNCAL-DPLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIVATAGPPLEPPLTVTGTT 215          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBW3_9PHAE2.260e-13647.41Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LGP4_ECTSI1.110e-13045.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN1_ECTSI4.300e-6958.55Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LHU1_ECTSI2.530e-6857.98Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D7FRE8_ECTSI6.830e-6653.70EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JJ37_9PHAE2.080e-5954.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F2Z7J0_9FLOR3.630e-5858.64Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3ISL2_9FLOR7.260e-5854.55Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
D8LED7_ECTSI3.950e-5145.54EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A1X6NJE1_PORUM9.140e-5151.16Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1142contigA-nodosum_M_contig1142:222917..236178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGP4
PFAMsKringle,LPMO_10,WSC
Model size3057
Max annot lvl2759|Eukaryota
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categorysignal peptide
Exons11
Evalue5.49e-138
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
EC3.4.21.7
Descriptionprotein xylosyltransferase activity
Cds size1422
COG categoryU
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1142.7.1prot_A-nodosum_M_contig1142.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1142 224413..234888 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866547.1336355-UTR-A-nodosum_M_contig1142:222916..2244121680866547.1336355-UTR-A-nodosum_M_contig1142:222916..224412Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1142 222917..224412 -
1680866547.3062289-UTR-A-nodosum_M_contig1142:234888..2348891680866547.3062289-UTR-A-nodosum_M_contig1142:234888..234889Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1142 234889..234889 -
1680866547.3181443-UTR-A-nodosum_M_contig1142:236040..2361781680866547.3181443-UTR-A-nodosum_M_contig1142:236040..236178Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1142 236041..236178 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866547.197829-CDS-A-nodosum_M_contig1142:224412..2247511680866547.197829-CDS-A-nodosum_M_contig1142:224412..224751Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 224413..224751 -
1680866547.2109618-CDS-A-nodosum_M_contig1142:225092..2252021680866547.2109618-CDS-A-nodosum_M_contig1142:225092..225202Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 225093..225202 -
1680866547.2205794-CDS-A-nodosum_M_contig1142:225666..2259271680866547.2205794-CDS-A-nodosum_M_contig1142:225666..225927Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 225667..225927 -
1680866547.2312565-CDS-A-nodosum_M_contig1142:226126..2262351680866547.2312565-CDS-A-nodosum_M_contig1142:226126..226235Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 226127..226235 -
1680866547.241665-CDS-A-nodosum_M_contig1142:226418..2265441680866547.241665-CDS-A-nodosum_M_contig1142:226418..226544Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 226419..226544 -
1680866547.251941-CDS-A-nodosum_M_contig1142:226852..2269301680866547.251941-CDS-A-nodosum_M_contig1142:226852..226930Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 226853..226930 -
1680866547.2629216-CDS-A-nodosum_M_contig1142:227270..2274141680866547.2629216-CDS-A-nodosum_M_contig1142:227270..227414Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 227271..227414 -
1680866547.271029-CDS-A-nodosum_M_contig1142:227597..2276671680866547.271029-CDS-A-nodosum_M_contig1142:227597..227667Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 227598..227667 -
1680866547.2794247-CDS-A-nodosum_M_contig1142:228116..2282111680866547.2794247-CDS-A-nodosum_M_contig1142:228116..228211Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 228117..228211 -
1680866547.2879434-CDS-A-nodosum_M_contig1142:234798..2348881680866547.2879434-CDS-A-nodosum_M_contig1142:234798..234888Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1142 234799..234888 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1142.7.1

>prot_A-nodosum_M_contig1142.7.1 ID=prot_A-nodosum_M_contig1142.7.1|Name=mRNA_A-nodosum_M_contig1142.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=474bp
MTRMIAVLLTCFAPSVLAASPPGSSLRRSQEDTEATVVAPRRLSTSDLAP
AEDEDGYYAHLGCYMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMA
TQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVW
PDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYAT
QYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRLID
ESPEPAPTPEPTPEPTPEPASESTAEVGSVNYANSKYPFDGTTFSGDGTY
YGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNG
AGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTT
PSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYP
LYGAQRVKTTTMMGKTATQEVSL*
back to top

mRNA from alignment at A-nodosum_M_contig1142:222917..236178-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1142.7.1 ID=mRNA_A-nodosum_M_contig1142.7.1|Name=mRNA_A-nodosum_M_contig1142.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13262bp|location=Sequence derived from alignment at A-nodosum_M_contig1142:222917..236178- (Ascophyllum nodosum dioecious)
ACCACCCAACGCACCCACCCACCCCAAAACTCACTCACCAGCACTCGCCA TTACCAAAATCGCCACCTTCATCTTCCTTCTTTCATCACCTGACTGAGTA AACCATCGACATCTTCTACAGTAAAGGCAAAAGAAAAGGTCAGTCACCAA AACAACAGCAGTCTCGAACACGAGAAACACGCGGTGTTGAGAATATAATG ATGCATGACTGTATTATTAGTTTCAGGTTCTTTCCGACTAAAACAGTTAC TACTGTGTCCCAAGCATATCTCAATCCTACAGAGTGGTTATTGTTATGAA TACTGTATAGATACTGATGATGATTCTGAGAATCGATAGTCTCCATATAT TATGGTCAAGACAACTACTGTTGTTGTTGCTGTTGTTGTTCATGGTCTAA AGGATTGGCCGCATACTCGGGACTGCGTTGCTATTAATAGCCCACATATT CTCGACAAACACACACTCGTAACAAGTATCATTGATCCCCCCTTGGGAGG ATCAATGCGAGTGGCATAGAATGACTAGGATGACAAGGCCGGATTGCGCG GTTATGTGCAATTTAATAAATACACACACACACACACATCTCCTGGCCGG TAGCTGTAGAGCTTATATAACGCTAATCCCTGTCCAGTCGCTAGTATTTA GTACTGCTTCGGTTTCGAGGAATGCGGATTGCGGCCACGATAGGTATTAA TAACAGCTTAAGATGGGTATAATAAATAATAAATAATAGTGGAAACAAAA AGGGCAATTGAAAGTGCAGCGCTGTTGTTGTTGTTGAAACCCCGATGTGC TTGCTTGGGTCGAGCGCAATCTCTCTCTGCAGGGCCATATAACTTACAAA TGATCTCCAATATTATCGGTCAATTTTACTATTTTCGTTTGCTGGTATAA TAGTCCTGTGATCCCTACCGCTAGAAGAGCTATACCCCATGTCTCGCAAC AGCAGCAGGCTTCACATGGGTTACCAGTATACAATAACTCATTTATTTAC CGGTACAATACCATACGTTGTTACAAACGTCAAGATTTTGTTATGCGCTG TAGCATCATCTACATACATACCTACTCTCTATGTACTACTGGTCAACGGC TACTACTACATATATACGGTGTTGTTGTCGTAGGTGCTAACTGTTGCTGA ACGAACCCGTCCACTGAATGAAGTATAAATACTCGTACATGGAATACTGT TGTTCACATTAAACTTTATTATGCCTGCTGGTGATTCAATGCACCTTTAT TTCTTATTGTCGTCCCCAACATCTTGCGTTAACCGGCAGGATGACTAGGA TGATCGCGGTCCTTCTGACATGCTTTGCGCCCTCCGTACTAGCGGCTTCT CCACCCGGGTCCTCCCTGCGGAGGTCTCAGGTCAGTACCCACTCACTTTC ATCCCTTTTCAAGATAACATACCTTACTATATAAACTAGAAGTGGAAGAG GCGGAAGGGAAGCTCCACAAAATCACGTACGGGCTGTACAGTAGACTTGC TGAATGGCTCTATATTTCGTAGGCGAGTATGCCTTCTACCTACTACGGTA CTACACCACTTCTAATTTGTCGGAGTCCGTTGTCCAATTTGGGCTTCTTG CGAAATTCTTTGTCATATTTCTCGACAAATCCAAGAAGCATATGATCGAC CAAGAGAAAAGTTTGCCAATTTTTGCTCTGGAAATATGCTCCCTTTACCT ACCAGTACAACCACAGTATAGAGGTACACTGTATCTTATGCTTCTTTCGC TTCTTTACCTATACGTACTCCCTGCTACCACGGCTACCACTTGGCACTAT TTATATAAATATATATAGTTCACGAGTTCTCTGGATGATGTAGAAATAAA TGTTCCTGCTTCACACGCGGCCTCGGTCCATCAGTTGCGCGCGACGTGAA ATTTATCCGGCTGGTCACCCAGACCAGAGCGGTTGGCTACTGCCTGGTGA TTGGGACCGTATACTATATGTTACAGACGGTACAAAGGACGATACTGCAC CACTATTGTATGTACAATATCACCAGTCACATCATACTACAGTTGTATCA GTAGTGTCAGTAATCCGCCCAAGACCAAGGCAGGGCGAAAAATCCGCTGC CGTCTTATTCGACTGTGGTGTATAGTTATCTGCTCTTTAAACCATGTGTT TTTGTGTGTGTATTCTTCACATTAACCGATCGGGCCTTAACCATATCCAG CAGTAATACACGCGGTTGCCAATGCGGTACTGTACGTCGTCTGCTGGGCA GGAAATTATCAGAGGGACACCTACAAAGCTCCAAAGAGAGCATCTGAACT TAAAAAAAACAAGGCAAAAACGACAATAAGAAAGGGAAAAAACAATACGT AACAAAAAGCATGCCAGAAAGGATAGTATTGATAGGTATTAATAGGAGGC AGACACGCGGAGGGAACCCATAAAATAAAAATAAATATGTGGCACATACA CACACGCGCGCTATCATACACGAAGAAGGGCAATCGTCAAGGAGGGTTTG GCATATCGCCAGCCGCGAGTCATGCGATACCCCCCCCCCCCCGAATCGCA ACTATTAATACCTCGCATTTGCACCCAAAGGCATAGCATCTACAACATAC CGTACTCTCAGGGTTTTCAGGCTCCTATTCTGGCACAGCCGACGCTGCTT GGGCAGTCCTTGGGTCGGTCCAATCAACACGGCTCTAAAACGTCTCAAGC TTGCTACGGTCACCCCAGGTGCAACCTCAACCATGCCCGGCTCTTTCGCT TCTCTCTTCCTCTCTCTGCCGGTTTTCGGGCGCCTTTTCCTCTTCCTTCA CCCACGCGGCCATAAACCTACAGCCAGCCCCCTTTGCAAACTGCACTGTA CTAAACCCCCCAAGGTCTAGTGCAGCGGTGCTCCAGTCCCCTGTGATGCC AAATACCCAACGATCCTCTGCCACGCAGTCTGTCCTTTCTCCTTCCCCCC GGCTCACGTTTTCCCGCGTTCTCCAGCTCTCCCGACATGTAATCGATCTA GACGACGACGACACTCAAACAACAGGAGACCGTTGAGAGGTTCATGTCAA ACACAGTAGAACTACAATATAGATAGCGCGATCAGCGGGAAGTCTTGAAC CCCTTTAGAACTGTATATTTTAGCTCTAGGCCGGCAGATCTGATAACAGG TACCAGGTGTCCAAATGTGGCTTATATTTCGGGGCAGATTGGTATAACTT TACCGTCGTTGTTGTGCTACATCATCTAATCTTCTTGCGCATAGAGTCAA GGCCAAGGTATCGATACGTCCAAGATTTTTCTATAGGTTCTTAAAAAAAA ACACCGATTTTCAGGAGTAAGTGTGTGTGTGCAACAACAACTTTTGAAGG AATTTATGGTCATCTTGGTTTGTTCGAGGCACACCACGTTGTCATTCGTT GGCCGCCAGATGCTTCTCCGTTCTCTCTTGTGTACGGTCTAAACGCGTGG ACCGTTGTTGTGTTTTGTGCATGAGGAGCATCTGGGAGCCGTAGACATGG CATCGCACGTGGGGACCATGCCCACTGGGCTTGTCTCTTACTTCCTTGTG TGATTTCCACTGCTCTTCGTCCACTTCCAGGTGAATAACGGTGTCTTGTA CTTTCTGGATTATGTTGAAGATATCTACATCATGGTCCTCCTCTCTGTCC TCGTTTCAATCCTTAACCCAAATCATACGTATTTACCACTTCTACTAACT GTGTACTGTAATACCATGTAGTGACTTTGTCTTCACGGCCTATGTGACAG TATATTATTACCACCAGGTTTGATGATGTTATTACATGTTTTTATTTTCG CTGTTTTGTCTGGTGTCCCTGCATGGCGATTGATGCAAGCGTACAGTATA ACAGTATAATGGTGGGCTTCTCCCCGATATTATACTGTTGACCCAACGTT ACTACGATGATAGGGGGACCCGTTTAAATGTCACGAAGAGGTTTTGTATT ATTTGCAGCATATGATCCCACTTAAACTTTTTGACATTTTCCCCCCTGAC TGGGGGATGCTCAGAAGGTCTAGACGCGTTCTGATTTTTCTTTAAACAAA AACATGCATGCGGGGTTGCCAATCCGGTACGTGATCTGCTAGACAGTAAA AGTTCAAAGGAAATCTATCTGCAAGGCTCCAACTAGAGCATGAAAAAAGA CAGAAGGCAAAGAAGAAAAAAACAGAAAGTTGAAGGGCTATTTTTTTCAA CGTTGGAGAAGGGGGAAGGCATGCTAATGATTGATTGATTGATTGAATTC TCACATAAATAAGCTAATGTCAAAAATCCAGCCCGTGGTCACAAGGTAGA AAAACACCGTTCGGAAGGAAAGAACGTACAACGTACTCTCCATACAAAGA GAAAGCGGAAACGGTACAAAAAAATACTCGGAAAAAACGACATCTAAAAA AAAACAAAAAACAAAAACGTGTGGCTATCGGGGCGCCTGCATATCGAAGG ACGATTGAACGAAGGGCCGCGGCTTCAACGAAGAAAGCATAAAGACGAAA ACGGAGCAAAACAAAACAAACGTAACACCAGAGAAAGACGTCACGACATC TGCAAACCAAACGCCCGGAGGGCACAAGTTCGCGCCACTTGTGACTAATA GTCAATAAGGGCGAGCGAACCAGCACGAGCCCGCTTGCTTTGGGATATCC TCTCCTTGGCCCTTCCCGTCACGTTCGGGCATACCATTTCATGCCGCAGT CCAGCCTTGTTTTTTTGTGCAACGATCCATTTTGCCATGAAATGTTCAGC CCCTTGTTCCGCCCACGGAGTGATGGACTCGTACGTGCGAGCGACAGGAA ACATATATTATTTCAAGGCATGGATGTTTCCAGATCCCCCAAAAACACGA GAAACATAATCGAGGGGACAGGAAGCGTTCGAATAGGCGCGGGGACGGTA ACAACAAGCAGCGCGTGGATTGTGACCCGGTCGGCAAGAAGAGGACGGAG ACCATGTGGCATGGTTGGAGAGGGGGGGAAGATGTGACCACAACCTCACT GGCCGGGATTTTTTTTGTTGGAAATATTGTTTATAATGTGTACAAGTACG TAGTATGAAGTGATCCTAATGAGGGAGGAGGGATTTCTTTCCCCGCCTCT CTCCACAAAATACGGTGGTCCTGTCACCTACTAATCGTCATTCTATGCCA CTCGTATTCGTCCTCAAGTGCGTGTGTGTGCGTGTGTGTTTGTTCTTACC GATCGGCCCTCAGCCATGTCCAGTAATACCGTAATATCCTCTGAGTTCGC CCCCCCCCCTTGAATGCCCCCCCCCCAAAAAAGTTAGCCAAAATAGGCAT AAAAACGTTGAGTTATCCCGGGCGGATTTTTTTTTTTTTTTAAGATTTTC CTCCTACCTTTGAGTTAACCCCGGGGGGAACACAGAAAAATCGCCAGTAT TCCTTCCGGCAGTTGTCAATTGTTTGCTGTTGTTATGTTGGTTGTTGTTT TTGGTATTGTTGCACAGAAATTGAATAAATATCGGAAAAAAGTCCGAGCG TTTGCGGGTGGAGGAGGGACTCCCTCGTAATACTAAGTGCAATCAGCCAG TGTGAAATGCAAAGTAAAGGTAGACAGAGAAGTTCTTCGAAATCGGGGCG ACCGAACTAGAATTCAAGACGTCGTTGTTCCTTTAGCGTCAACATTTAAA GCCAAACCCATTCTTTCTTGGCAACGAGTACAAGGACTTCTCTGCCGTAT TGCGAAATACTGACTGCTCAACAACCACACCGTAATATAGAACGCACAAG AAGCCACATGGCGGGCGTTTGAAATCGGCGCGCGACCAGACTTTTCCCCC CGGGGTGTTTTTTTTTTTTAAGATCCCCCGGTGATCGTTTTCCGCAAAAA ATATATATCCCCCGCGGGGCGAACTCAGAGGATATTACGGTACAGTATAC GCGGTTGCCAATTCGGTACCCAATTCGGTACGTGGTCTACTGAACAAGAA AATATTAGATAACAAGAAAAAGTACATACTCTTTCACTTCGCCTATTTGA TGGGTGCAGGTACAAGTAGATATATACACACAGTATATATCTCCAATATA CAGTGAGTGGTAGTAGTATATTTTTAACGGATAAGACACACGGTCTTATA ACAATTAGTACTGCTGCTGTAAATAATGTCCCCGCTTGTGGAATCGAAAA ACAGAATGAACCTCATAGCCATATAATAGCACGCACACTACTACCCTATT TTTTGTTGTTGTGAATGTGCGTATGGTCAGTAGTACCAGAAGATATTGTA CCAAAGGATATGGTTGCAATCCTTGTTGCCTCGGGTTGGTTGGAGTGTTC CGAGCAGTAATTGGTGCAGGAACAACATACATACATCAACTGAACGTGGT CAATTTATTTGTCGGATTGAGGACGCAAAAAGTCAGATACATACATTACT CAAATTGTTTTCTTGTTTAGAATAATAATGGTAAGATACGTTCCTGTCAC AGATGCGACTGTTACCGTCATGGTCGACCTGTCGGTGCTATCAAAAACTA CAGTGCCTCTGAAGGCGCGGATGGTGAGGTCCGAGGTAGTAGAAGCTCTC TTGTACGGATGCGTGACGTGGACCCCCCTGAAGTGCCACTACGCCAAGCT CCGTACAACCCACCACAGGATGTTGCTTCGAATTCTGGGAGCCTGGTGCA AGTCGCCGAACAAGCGCATCCTCTCGTACAAAGATGCCCTTCACCGAACC CAATGCGAGAGCATCGAAACAACCGTACGCACGAGGAGGTTGTTGTGGGC GGGGGCGCTACTCCGCATGGGTGACCACAGGCTACCCAAGAGGGTCATGT CGGGAGAACTCGAGAACGCGGGGAAACGTGGACCGGGGGGGAAGGAGAAA GAGTGGACGGACTGCGTGGCAGATGATCTTCGGCTATTTGGCGTCACGGG GGACTGGAAAACCGCCGCACTCGACCCTGGGGCATGGTACAACACCGTAC AAGAAGGGGTTGTAGGTTTATGGCCGCGTGGGTGAGGGAAGAAGAGAATG CGTCCAATCAACGGCAGAAGAAGAGACGCGGAAGAGGCGGACAAGGTTGA GGTTGCACCTGGTGTGACTGTAGCAAGCTTAAGACGTTTTCGAACCGCGT TGATTGGGCCAACCCAAGGACTCCCTAAGCGACGTCGATTGTGCCATTAG TGAAACTGAAACCCTTAGAGTACGGAATGTGGTAGATGCTACGCGCTGTT TTTTTTTTTTTTTTGGGTGCACGGTTGCGAGCCGGGGAGGGTATCAGATG GCTCGCGGCCGGCACTATGCCAAACTCTCTCTATCGAATGCCGCTCGCTT ATCTTTCTCTGACCTGTGTATTTTGTTATTCATGTTCCTTTCTCTTTGTC GTTTGTGTGTTTGTGTTTTTCTTTGCTCTCATTGGAGCTTGGTAGATGTT CCTCTGATCTTTTTCTGTCCAGCAGACCACGTACCGGATTGGCAACCACG TGTATTATTGGGTATGGTTGAGGCCCGATCGGTTAATGTGAAGAAAACAA CAACAACAACAGAGAGTATATTTTTCTGCTACTACAGAGTAGTACCTACA TAGTAGTAGACTCTAGTAGTTGTACTCGTAGGACGATCCAGAATGGCACG GTATTTATTTATTTTCGCCAGTTTACTAAAAATCCGTTCCCACAACAACC ATATACATTTTTTCCCCCTGACTGGGGGATGCTCAGAAGGTCTAGGTGCA TTCAGATTTTTCTTTAAACCATATAAGAGCAACAATTACTCTTTTATAAT AATATAATAGTAGTCCTTTATGTGTGTGAACGATGGCGGAGAAACGAAGA GGTTTCCGGTTTCGACAGCATCAAATCGTTTGATAAGTCCATTTAATTTC TCTTGCACCCCTCTACAGCATCATCAAATCGTTTGATAAGTTACACGAAA AGGCTGCTGTATGTACCCTTCTACCGTTTTTCGTTCACAACGCAACACGC GGCAATATATTATACAGGAAGATACCGAGGCAACCGTCGTTGCGCCCCGC CGCCTTTCGACGAGTGACTTGGCGCCTGCCGAAGACGAAGACGGGTACTA CGCCCACCTCGGGTGAGTAGAAAAGGTCGCGACTCACACCCATCCACTTG TCGTGAAACTAGTGTATATATGCCCTTCTCTGCCGCTTGAAGTCTCCAGC ACGGGGTCACATTGTTCAGTAACATACACTTGATCACTTGATCACTGTAT TTAGTCATAAGGAGATATCTTCTAAATACCGCCCTTACATTATTGGTAAA TATGTTTTCGCTCCCATAGAGGTATCAATGTACAAGATACGATGAGGTGC GCCTTGACGTTGGAATCGTGCTATGTCTCTGTGGTGGTCTCATTCAGCAA CGTTTCACTTGCGGCGACACCAGTATCCCCTCAGCGATGCAGAAGCTTTG AGTCCGCTCTGCAGATTGCTCCCTACCTGATCGACCTTAATGTGACAACC AAGGTCTCGACATGTAAGGTTTGCGGTATGCCATGTGGGTTTTTTGTTGG CGGAACAACAGGTGTTACATGGACAAGAAAGACGATAGAGTTCTGGGGAT GAAGCTGGTGCGGGACGATGTTACGGCAGAGGTAAGGACGAGGGTTCTCT TGTCTACAGTAGTTTGTTTGAGATTCAATTTCCCTAGAGCTTCCGCGACG ATATATAGTCGAGAATAAAACGCTGTAGGCATCCGCCTTGACTCATTCAT TCATTCGACCGCGCTCTACCATTTTGCCGATGGCTTGGTTTGCTTGTCAC TGTTGATAAAACAGCTGTGCCACGAGTACTGCAACGTTAATGGGGCTTTC TACATGGCGACACAGTTCGGAAATGAGTGCTTCTGCAGCCGCGAGGGGGA TCTCGACTTCGACCGCCATGACGTTGGGGTGTGCGACAAGCCCTGCGCAG GCGACGACGTGAGTTGGTCTTGCCCCGCAGGGTCTGTGGCTAATACCGTA GCGCCCACAAGACCGACTCTCGCTTGCCTTGTTTAATGCTAATAGAACGT AGGTTTGATTTTCAGTTATGATAGATCACGGCCGAATGTTGCGGTTCAAC ACCCCCTCCACTTCACTGTGTAGCCTCTCGAACTATTTCCGCTTGACTTA CACCTGTTCTCATCTTCTACTTGAGCTCGCACCATGGGCCTAGGCCCTAT CGTATCGTTCGGCTCCGTACTCCTATGTTCTGACCCCTCCCTCGCCTCGG TCTCATGTACGCACCTTTGTTGTTGTGATTGTCCTCACGTGGCTGCAGTC CGAGCGGTGCGGTGGGTACTATGCCTTCGACCTGTACGAGCTTGTGTGGC CGGACACACCAACGGACCTTGAATACGTGAGAACTATCTACAGTATATAA AAAATTGGTACTGCAAGCCTGCTCGTATGTTGTTGACCTATAAATAGGAA GCAAAATATACATTAAATAATGTGTACAGTAGTAGTGACTCGACTCGTTT GATGTCGGAAAACCACGTGTGACAAGCAAAACATACAAAATATTACAGCA AAAAGTACCAATAATTGTCGATGACGATCGTGCTACAGCGTGTGATGGCA AACGGTGCCGAAAGATGTATTCGTTCACCACCTCATGGCACCGTTTCTTG GAACACTCTATTCCCACTGATGATGTACCATTAGATGGATTGCTACGCCG ACGACGCGGAGGAGAGGGTGATGTCCAATATGTACATCAGTGACGACATG ACGTCCGCCATATGCCGTGACCACTGCAAGGACAAGAATGCCTTGTACTA CGCCACCCAGGTACAGCAGGCGCTAAGATTAGCCCTCATGTGCGCGTTGT TCAAAAAAATGTTTTCGGTCAATTTGAGAGGGAGGTTTGGGATGGTGGGG GACCATTTCTCTTCGCTGCCTAACTTCCATGTGCTTGTCTTCTAAATCCG ACAATGTTTTCCTAACATTCCGTCGTCACAACTCAAACCACAGTATGGGC ACGAGTGCTGGTGTGGAACCTCGGACGTGTTCGCCGACTACGAAAAATAC GGCAAGGGGACATGCCACATGCGTTGCGCGGGAGACACATCGGCTGCGTG CGGTGAGTTAAGCTCTATTATCGTAGAATGTACATCGCTCCCATTCGCGT GTATATCATTCTTTGCTTCGCCTTGTGTCGCATGTTCCGCTCGAACCCTG CCGAATATACCCCCTGCGAAGATATGCGAATCGCAAAGTTCGTGCCCTTT TTTTGTTCTAAAACCTCTTACCTGCCCCGTTGACTCTGTGTTCACTTTAA GGCGGACGCTACGCCTTTAGCCTGTACCGTTTAATCGACGAAAGTCCCGA GCCGGCACCTACTCCTGAGCCGACCCCCGAGCCTACCCCAGAGCCTGCTT CCGAGTCTACAGCAGAAGTCGGATCTGTCAATTATGCGAACTCGAAGTAC CCTTTCGACGGTACTACCTTCTCCGGTGATGGCACCTATTACGGGGAGAC GTCGGACGGCAACTGCGCTATCCGCTCACCGATCCCTCGCATGTATGACG GCATGATTCCAGGTGAAAAACTCATGTTTATGCCGTCTCCTTTTCTGTGG GAAGCATGTGATCGCATGCCAAAATTCCCGCGATTGCGTACGCCGTCAGA TTCATTCAACGAATGGGCAGGGGAGATGATGCAAAATTTCCCTGTTTTGG GAGTGGACGGCACGAAAATAGCCCCTCCCGGGACACACATGATCCACCCC CTTTCACAAGGAGTTAGATTCAGAGCAAGCTTGCCGACCATGTAGGTGAT CCTATAGCCCTGTCCCCTGTAGGGGCTGTTCCGCTGACATCCCCGAGACG GACTCGTGAAATCGCCCCCCCCCCCGAATCTGAACGACTCGTCATACAGG TTTTTCTCTGTTACAACCTTTGTAAATTACGAAGTCGGCATCCCGCCACC TCAATTTCCTTACCCCCCCCTCCTCCCCTCTTCTCCCCTCCTACTTGGTC CATCGTTCATGTTTGCGATCTCACAGTTGCACTAAACGCCGCCCAGTACG GTGGTTCGGAGTTGTGCGGCGCGTGCATCGAGGGCGAAGGATCAGGAAAT GGCGCAGGCAGCAATCCCATCACTGGATCCTTCAAGGTGCGCCATGGAAG CGTCGTCGCCCGGGATCTGTTGCGATTCGGTGGACGTCGTATTTTCACTT GATATTGGGGGGGGGTCATGTCTCTGCTTGTTTCTAGACAGAAAGTGCTC ATTTGAGCGTCTCTTTCTCTGGGCAATCTCTTTAAAGTTAGTCCGAAACC TGGCAAAGCAAGCATGAGTGTATATGGTATATATTAGAGGGCCTCGACCG AATCGTCGTAAAGAAAGAAGTAAACGCCGTCAACGCGACACGACTGTCTC CCAGCACGCTTCGATTTATTGACCCTACGTAACACACCCTCTCTTGTCTA AACTATTGCACGGCGACCTTGCTTCAGGCGTACGTGATGGACAAGTGTCC CGAATGCGCGACTGGTGATCTCGACTTCTCCAAGAGCGGGGATGGCCGTT GGGATATTTCCTGGAAGTTTGTGGAGTGCCCCGGTTCCACCACGCCAAGC TTCATTTTCGAGGGCAGCCACGAATACTACTGGAAGATCCAGCCGCGGGG GACTAAGACTCCCGTGATGGAGCTGACGGTTGATGGTGCCTCGGGATCTA AAACCGACGACAACTTCTTTGAGGTCCCCGGCGCTCCGTACCCTCTCTAC GGGGCACAGAGGGTGAAGACGACGACCATGATGGGCAAGACAGCGACGCA GGAAGTCTCCTTGTAAAGGATTGCTTTGTCTCGTGATAGGTGAAAAAAGA AAAAGTTTTCACGTTAAGAAAATGCGAAACATTTCCACAGTGCCGTTGTG TTGCTTTCACTGCTACTGCTGCTGCTGCTGCAAACGTACCCTTGATGGGG AAAGTCGCGTTGTCGTTGGTGTATGAAGTTGTGACAGCGCCATAGGGTTG TAACCGGTTTTTATCATCGACCCCGCCGGGAGCGACCATTGCTTTCCCTG GAGGTGTTGGGTGTAGTTTTAGGAGGTCCATATACTTCTGCTGTGTGGAT TTGAGAGCTACTGGCTTTTCAGAAGGTAGTGCCGCAGTCGTCTTCGCCTT TCTTCGCTTTCTTCCACTCCGCGGTAGCCCAAGTTTGCCACACATTCGCG CTTTGTCTTCGCGGGCTGAAGGCCGAAAGCTCGCGCACGTACATCCGTAT GTGTTGTCCGCGAGCCGCGTGGCGTATACATACGTACGCCCGTTAGAGGT TTTGCGCATTTGCTCACGTACCAAACACGAATTTGTATGTTGCGCGATAG GCGCCGCTCCCGTCTTGTCGAGCGCATATCTCCGTGCGTCACTCCTCATG ACTTCGTTAGTTAGATCTTTGTTTTTTTTATCCCTTAACGACGACCTCAC GTATGCTTTGCTGAGCTTGCGAGTTGGGGGATTCGAATATTCCGAAGTAG AATGTAATGTTCTTCCACAGGGTCAAATTTTTCATTGTATGTGGGAGGGG GAAACTTACCTGATTTACTTGTATTGTTTTGTGATTACTTTGGAAATAGT CGGAGGAAATGGAAACGGCGGCGCCTGGACGTTACATATTTGTTCAGGCG CTTTTGTGTACAGTAGTATAATGTAGAAAATACAAAATGGCGGTTGATGC TCCTAGCGTGCTGGTAGATCGCGGTGTCATCTCTTCGTTGACTCCATGCG CGTGATTCGGAATTCCATAAGTGACCTCTTGAGATAGAACATAATAGCAG CGGGTGATTCAGGTGATTGGTCTTACATGTTCACTTGTTCGTTGCTGTGG CACTGGCTTCATTTTCATCGATTTCGAGTTGTTGCCATTTTGTACGTGCC AGGTACGAACGCGATAAGAATTGAGTGTGCGGCGTATCTGATTAGATAGA AGGACCAGACGTCCAGAATATAAGTCATGAAGGTAGTGCTTTGAGATTCA GTCTATTTGTATCCACCCGTTCGATGTGAATGCAAGAGGCTTCTGGTAGG CGCGGCAATATGTTGTATACCAGACCCGTTCAACGATTGAGGGGGGGGAG GGGATGCAATAATTTTGTCCCCGTTTTGAAAGGGAATGGCACGAAAATTG CCCCTAACGGGGACATATTTGACCAACCCCCTGGCGGATTCGGGGCAAGC TTGCCGACCATGTAGGGGATCATGTAGTCCTATCCCCGGAAGAGGGTGTT TTGGTGACCTCCCCGGGGACGGAATCGTCGTATCCCCGCCTTCCCCAATC GTTGAACAACTC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig1142:222917..236178-

>mRNA_A-nodosum_M_contig1142.7.1 ID=mRNA_A-nodosum_M_contig1142.7.1|Name=mRNA_A-nodosum_M_contig1142.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at A-nodosum_M_contig1142:222917..236178- (Ascophyllum nodosum dioecious)
ATGACTAGGATGATCGCGGTCCTTCTGACATGCTTTGCGCCCTCCGTACT
AGCGGCTTCTCCACCCGGGTCCTCCCTGCGGAGGTCTCAGGAAGATACCG
AGGCAACCGTCGTTGCGCCCCGCCGCCTTTCGACGAGTGACTTGGCGCCT
GCCGAAGACGAAGACGGGTACTACGCCCACCTCGGGTGTTACATGGACAA
GAAAGACGATAGAGTTCTGGGGATGAAGCTGGTGCGGGACGATGTTACGG
CAGAGCTGTGCCACGAGTACTGCAACGTTAATGGGGCTTTCTACATGGCG
ACACAGTTCGGAAATGAGTGCTTCTGCAGCCGCGAGGGGGATCTCGACTT
CGACCGCCATGACGTTGGGGTGTGCGACAAGCCCTGCGCAGGCGACGACT
CCGAGCGGTGCGGTGGGTACTATGCCTTCGACCTGTACGAGCTTGTGTGG
CCGGACACACCAACGGACCTTGAATACATGGATTGCTACGCCGACGACGC
GGAGGAGAGGGTGATGTCCAATATGTACATCAGTGACGACATGACGTCCG
CCATATGCCGTGACCACTGCAAGGACAAGAATGCCTTGTACTACGCCACC
CAGTATGGGCACGAGTGCTGGTGTGGAACCTCGGACGTGTTCGCCGACTA
CGAAAAATACGGCAAGGGGACATGCCACATGCGTTGCGCGGGAGACACAT
CGGCTGCGTGCGGCGGACGCTACGCCTTTAGCCTGTACCGTTTAATCGAC
GAAAGTCCCGAGCCGGCACCTACTCCTGAGCCGACCCCCGAGCCTACCCC
AGAGCCTGCTTCCGAGTCTACAGCAGAAGTCGGATCTGTCAATTATGCGA
ACTCGAAGTACCCTTTCGACGGTACTACCTTCTCCGGTGATGGCACCTAT
TACGGGGAGACGTCGGACGGCAACTGCGCTATCCGCTCACCGATCCCTCG
CATGTATGACGGCATGATTCCAGTTGCACTAAACGCCGCCCAGTACGGTG
GTTCGGAGTTGTGCGGCGCGTGCATCGAGGGCGAAGGATCAGGAAATGGC
GCAGGCAGCAATCCCATCACTGGATCCTTCAAGGCGTACGTGATGGACAA
GTGTCCCGAATGCGCGACTGGTGATCTCGACTTCTCCAAGAGCGGGGATG
GCCGTTGGGATATTTCCTGGAAGTTTGTGGAGTGCCCCGGTTCCACCACG
CCAAGCTTCATTTTCGAGGGCAGCCACGAATACTACTGGAAGATCCAGCC
GCGGGGGACTAAGACTCCCGTGATGGAGCTGACGGTTGATGGTGCCTCGG
GATCTAAAACCGACGACAACTTCTTTGAGGTCCCCGGCGCTCCGTACCCT
CTCTACGGGGCACAGAGGGTGAAGACGACGACCATGATGGGCAAGACAGC
GACGCAGGAAGTCTCCTTGTAA
back to top