prot_A-nodosum_M_contig1142.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1142.7.1
Unique Nameprot_A-nodosum_M_contig1142.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length474
Homology
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 4.910e-143
Identity = 229/483 (47.41%), Postives = 286/483 (59.21%), Query Frame = 0
Query:    1 MTRMIAVLLTCFAPSVLAASPPGSSLRRSQEDTEATVVAP---RRLSTSDLAPAEDEDGYYAHLGCYMDK-KDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRL-IDESPEPAXXXXXXXXXXXXXXXXSTAEVGSVNYANSKYPFDG----TTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPG-APYPLYGAQRVKTTTMMGKTATQEVSL 473
            MTR+ A LL C  P         +SL  S    E    A    R LS S           Y HLGCY+D    +    + LV D +T ELC++ C+  GAF+M TQ GNEC CSRE DLD+   + GVCD+PCAGD +E CGG    DLY+L   D P   EY  C++D  E RVM +M + + MT+ +CRDHC+  +A+YYATQYG+EC+CG S    DYE +G GTCHM CAGD+ +ACGG +AFSL++   D  P+PA                 +    S++ A SK P  G    TTF GDGTYY   S GNC      P +Y GM PVALNAAQYG S +CG+C+EGEG+G G G NPI G+FK ++MDKCPEC  GDLDF    DGRWDI W+FV CPG      + E +  YYWKIQPRGT TPV  LT+ G + ++TDDN FE+   +  P Y  Q V TTT+ G     E+S+
Sbjct:   65 MTRLAAALLVCATPV--------ASLETSLRGAEVAAAAGGARRGLSGSSYES-------YEHLGCYVDNGMVNSSPHLPLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKFGADGMPDPAVPDVSEPPSEPAPEPVVSTPAPSMSEAESKTPISGGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMT-PYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 3.350e-137
Identity = 234/513 (45.61%), Postives = 295/513 (57.50%), Query Frame = 0
Query:    1 MTRMIAVLLTCFAPSVLAASPPGSSLRRSQEDTEATVVAPRRLSTSDLAPAEDEDGYYAHLGCYMDKKDDRVLG-MKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRL-IDESPEPAXXXXXXXXXXXXXXXXS------------------------------------TAEVGSVNYANSKYPFDGTTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEV--PGAPYPLYGAQRVKTTTMMGKTATQEVSL 473
            MTR+ A LL C  P         +SL  S    E +    RR  +     A      Y H+GCY+D         + LV + +T E+C++ C+  G+F+M TQ GNEC CSRE DL +   D GVCD PCAGD  E CGG    DLY+L    TP   EY+ C++D  E RVM +M + + MT+ +CRDHC+  +A+YYATQYG+EC+CG S    DYE +G GTCHM C GD+ +ACGG +AFSLY+   D  PEP      XXXXXXXXXXX                                     ++  G  + +  +Y   G TF+G+GTYY  TS GNC      P +YDGM PVALN  QYG S +CGAC+EGEG+G G+GS+P+ G+FK ++MDKCPEC+ GDLDF    DGRWDI WKFVECP     SF  E   EYYWKIQPRGT TPV  LT+ G + ++TDDN FE+  P    P Y  Q V TTT+ G     E+S+
Sbjct:    1 MTRLAAALLVCATPV--------ASLETSLRGAEVSAGGARRGLSGSSYEA------YEHVGCYVDNGMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADGMPEPDVPESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGGGGDVSGGEY---GITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGD-PWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 3.370e-73
Identity = 113/193 (58.55%), Postives = 137/193 (70.98%), Query Frame = 0
Query:  281 NYANSKYPFDGTTFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL 473
            +Y+  +Y   G  +SG+GTYYG T+ G C+    +P MYDGMIPVALNA QYG S +CGAC+EG  SG+G+G+NPI  +FKA++ DKCPEC  GDLDFS SGDGRWDI WKFV CPG  T SF+   ++ YYWK+QPRGT TPV+ LTVDG S  +T DN FEV        GAQ V TTT+ G T T EVS+
Sbjct:   98 SYSGGQY---GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEET-SFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.590e-72
Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = 0
Query:  288 PFDGTTFSGDGTYYGET--SDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL 473
            P+D   FSGD TYYG T   DGNCAIRSP+P MYDGMIPVALN  QY  S +CGACIEGEG G G G +P+ G+FKAYV D+CPEC  GDLDF+  GDGRWDISW FV C G +  +F+FEGS+E+YWKIQPRG ++PV  L ++G    +++DNFF + G P+   G Q V T T++ K   Q V++
Sbjct:   36 PYD-EQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFD--GEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.470e-70
Identity = 116/216 (53.70%), Postives = 153/216 (70.83%), Query Frame = 0
Query:   44 STSDLAPAED--EDGYYAHLGCYMDKKDDRVLGMK-LVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRH-DVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRLIDESPEP 255
            S+ D + +E     G Y H+GC+ D + DRVL    L+  D+TAELC+E C+  GA YMATQ+G EC+CSR+G LD+DRH D GVCD PC GD+SE CGG ++F+LY L W   P D EY+ CY D+  +RV+S+M  SDDMT+A+CR+HC DK+A YY TQ+  ECWCGTSD  ADYE++G+G CHM C+GD + ACGG  A+SL++  +    P
Sbjct: 1129 SSDDFSESEPGGRPGAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAP 1344          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.530e-63
Identity = 105/194 (54.12%), Postives = 140/194 (72.16%), Query Frame = 0
Query:   57 YYAHLGC--YMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRH-DVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYR 247
            Y+A L C  ++ K+    +   L+  D+TAELC+E C+  GA YMATQ+G EC+CSR+G LD+DRH D GVCD PC GD+SE CGG ++F+LY L W   P D EY+ CYAD   +RV+ +M  SD+MT+ +CR+HC DK+A YY TQ+  ECWCGTSD  ADYE++G+G CHM C+GD + ACGG  A+SL++
Sbjct:  797 YFAGLACLPHLAKQPLHHVRSGLISSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFK 990          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 211 bits (538), Expect = 1.280e-61
Identity = 95/162 (58.64%), Postives = 119/162 (73.46%), Query Frame = 0
Query:  293 TFSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVP---GAPYPL 451
            TF GDGTYYG T+ GNCAIRSP+P MY GM+PVA+N AQY  S+ CGAC+   G G G+G+NP+ G+FKAYV D+CPEC  GD+D SKSGDGRW + W+F+ CPG     F+FEGS+ +Y K+QPRG KTPV   +V+G  G+KT DNF+ +    G  YPL
Sbjct:   23 TFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWV-FFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPL 183          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 209 bits (533), Expect = 7.510e-61
Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
Query:  294 FSGDGTYYGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTTPSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEV 444
            F G+GTYYG T+ GNCAIRSP+P MY+GM+PVA+N AQY  S  CGAC++  G G G+G+NPI G+FKAYV D+CPEC  GD+D SK GDGRW + WKF+ CPG     F+FEGS+ YY K+QPRG KTPV  L+V G  G+KT DNF+ V
Sbjct:   29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFV-FFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIV 178          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.680e-54
Identity = 92/202 (45.54%), Postives = 137/202 (67.82%), Query Frame = 0
Query:   55 DGYYAHLGCYMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSN-MYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRLIDESPEP 255
            D  Y+++GC+ D K+DRV         +T  +C EYC    A YMATQ+G EC+CS + ++++DRH  GVCD  C GD ++ CGG+ AFDLY++  P  PT  EY+ C+ADD E+R++ + + +  DMT A+CR +C++++A +YATQYG ECWCG S+   DY+++G+G+C   C+GD + ACGG  AF+L++  D   EP
Sbjct:  430 DEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKF-DGIAEP 630          
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 9.460e-54
Identity = 86/195 (44.10%), Postives = 132/195 (67.69%), Query Frame = 0
Query:   54 EDGYYAHLGCYMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDAEERVMSN-MYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYR 247
            E+GY +++GC+ D KDDRV         +T  +C EYC    A +MATQFG EC+CS + ++++DRH  GVCD  C G+ ++ CGG+ AFDLY++  P  PT  EY+ C+ADD E+R++ + + +  DMT  +CR +C++++A +YATQYG ECWCG S+   DY+++G+G+C   C+GD + ACG  +   +Y+
Sbjct:    8 EEGY-SYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYK 201          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1142.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBW3_9PHAE4.910e-14347.41Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LGP4_ECTSI3.350e-13745.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN1_ECTSI3.370e-7358.55Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LHU1_ECTSI2.590e-7257.98Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D7FRE8_ECTSI1.470e-7053.70EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JJ37_9PHAE1.530e-6354.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F2Z7J0_9FLOR1.280e-6158.64Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3ISL2_9FLOR7.510e-6161.59Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
D8LED7_ECTSI1.680e-5445.54EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMV6_9PHAE9.460e-5444.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 57..149
e-value: 0.0073
score: 13.9
coord: 156..249
e-value: 5.9E-6
score: 35.8
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 159..239
e-value: 2.5E-13
score: 50.0
coord: 61..139
e-value: 1.7E-12
score: 47.4
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 57..149
score: 8.980202
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 156..249
score: 9.800216
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 290..395
e-value: 4.4E-17
score: 64.2
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 293..415
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 396..473
e-value: 3.3E-6
score: 29.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..268
NoneNo IPR availablePANTHERPTHR24269KREMEN PROTEINcoord: 150..335
coord: 53..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1142contigA-nodosum_M_contig1142:224413..234888 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1142.7.1mRNA_A-nodosum_M_contig1142.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1142 222917..236178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1142.7.1 ID=prot_A-nodosum_M_contig1142.7.1|Name=mRNA_A-nodosum_M_contig1142.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=474bp
MTRMIAVLLTCFAPSVLAASPPGSSLRRSQEDTEATVVAPRRLSTSDLAP
AEDEDGYYAHLGCYMDKKDDRVLGMKLVRDDVTAELCHEYCNVNGAFYMA
TQFGNECFCSREGDLDFDRHDVGVCDKPCAGDDSERCGGYYAFDLYELVW
PDTPTDLEYMDCYADDAEERVMSNMYISDDMTSAICRDHCKDKNALYYAT
QYGHECWCGTSDVFADYEKYGKGTCHMRCAGDTSAACGGRYAFSLYRLID
ESPEPAPTPEPTPEPTPEPASESTAEVGSVNYANSKYPFDGTTFSGDGTY
YGETSDGNCAIRSPIPRMYDGMIPVALNAAQYGGSELCGACIEGEGSGNG
AGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSTT
PSFIFEGSHEYYWKIQPRGTKTPVMELTVDGASGSKTDDNFFEVPGAPYP
LYGAQRVKTTTMMGKTATQEVSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf