prot_A-nodosum_M_contig1132.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1132.5.1
Unique Nameprot_A-nodosum_M_contig1132.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length57
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A343C636_FUCDI (Cytochrome-c oxidase n=3 Tax=Fucus TaxID=3011 RepID=A0A343C636_FUCDI)

HSP 1 Score: 125 bits (313), Expect = 5.460e-32
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAV QDDYLSWVGKRLCS
Sbjct:  996 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVNQDDYLSWVGKRLCS 1051
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: Q2TUE5_9PHAE (Cytochrome-c oxidase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=Q2TUE5_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.390e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLF+KREGVFYGQCSELCGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct: 1241 ACPGRLNQVFLFIKREGVFYGQCSELCGVNHGFMPIVVQAVSQDDYLTWVGKRLCS 1296
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A0U1WNN9_SARFS (Cytochrome-c oxidase n=2 Tax=Sargassum fusiforme TaxID=590727 RepID=A0A0U1WNN9_SARFS)

HSP 1 Score: 123 bits (309), Expect = 1.890e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  992 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVSQDDYLTWVGKRLCS 1047
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: Q94YZ5_PYLLI (Cytochrome-c oxidase n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ5_PYLLI)

HSP 1 Score: 123 bits (309), Expect = 1.890e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVF+FVKREGVFYGQCSELCGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct: 1227 ACPGRLNQVFIFVKREGVFYGQCSELCGVNHGFMPIVVQAVSQDDYLTWVGKRLCS 1282
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: UPI002008EEC4 (cytochrome c oxidase subunit 2 n=1 Tax=Myagropsis myagroides TaxID=74101 RepID=UPI002008EEC4)

HSP 1 Score: 123 bits (308), Expect = 2.580e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  983 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVNQDDYLTWVGKRLCS 1038
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A0G2RLB6_TUROR (Cytochrome-c oxidase n=1 Tax=Turbinaria ornata TaxID=86657 RepID=A0A0G2RLB6_TUROR)

HSP 1 Score: 123 bits (308), Expect = 2.580e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  988 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVNQDDYLTWVGKRLCS 1043
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A1S5QK26_9PHAE (Cytochrome-c oxidase n=8 Tax=Sargassum TaxID=3015 RepID=A0A1S5QK26_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.580e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  989 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVNQDDYLTWVGKRLCS 1044
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A0U1V163_9PHAE (Cytochrome-c oxidase n=3 Tax=Sargassum TaxID=3015 RepID=A0A0U1V163_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.580e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  991 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVNQDDYLTWVGKRLCS 1046
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A8K1V3M7_SARHM (Cytochrome c oxidase subunit 2 n=2 Tax=Sargassum hemiphyllum TaxID=127544 RepID=A0A8K1V3M7_SARHM)

HSP 1 Score: 123 bits (308), Expect = 2.580e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  991 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVNQDDYLTWVGKRLCS 1046
[Close]
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Match: A0A1N7TJH6_9PHAE (Cytochrome-c oxidase n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1N7TJH6_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 2.580e-31
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWVGKRLCS 56
            ACPGRLNQVFLFVKREGVFYGQCSE+CGVNHGFMPIVVQAV QDDYL+WVGKRLCS
Sbjct:  992 ACPGRLNQVFLFVKREGVFYGQCSEICGVNHGFMPIVVQAVNQDDYLTWVGKRLCS 1047
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1132.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A343C636_FUCDI5.460e-3298.21Cytochrome-c oxidase n=3 Tax=Fucus TaxID=3011 RepI... [more]
Q2TUE5_9PHAE1.390e-3194.64Cytochrome-c oxidase n=1 Tax=Desmarestia viridis T... [more]
A0A0U1WNN9_SARFS1.890e-3194.64Cytochrome-c oxidase n=2 Tax=Sargassum fusiforme T... [more]
Q94YZ5_PYLLI1.890e-3194.64Cytochrome-c oxidase n=1 Tax=Pylaiella littoralis ... [more]
UPI002008EEC42.580e-3194.64cytochrome c oxidase subunit 2 n=1 Tax=Myagropsis ... [more]
A0A0G2RLB6_TUROR2.580e-3194.64Cytochrome-c oxidase n=1 Tax=Turbinaria ornata Tax... [more]
A0A1S5QK26_9PHAE2.580e-3194.64Cytochrome-c oxidase n=8 Tax=Sargassum TaxID=3015 ... [more]
A0A0U1V163_9PHAE2.580e-3194.64Cytochrome-c oxidase n=3 Tax=Sargassum TaxID=3015 ... [more]
A0A8K1V3M7_SARHM2.580e-3194.64Cytochrome c oxidase subunit 2 n=2 Tax=Sargassum h... [more]
A0A1N7TJH6_9PHAE2.580e-3194.64Cytochrome-c oxidase n=1 Tax=Coccophora langsdorfi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01166CYCOXIDASEIIcoord: 23..40
score: 67.41
coord: 5..22
score: 58.11
IPR008972CupredoxinGENE3D2.60.40.420coord: 1..50
e-value: 1.8E-19
score: 71.9
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 1..52
IPR002429Cytochrome c oxidase subunit II-like C-terminalPFAMPF00116COX2coord: 1..41
e-value: 1.7E-19
score: 69.9
IPR002429Cytochrome c oxidase subunit II-like C-terminalPROSITEPS50857COX2_CUAcoord: 1..52
score: 21.290482
IPR045187Cytochrome c/quinol oxidase subunit IIPANTHERPTHR22888CYTOCHROME C OXIDASE, SUBUNIT IIcoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1132contigA-nodosum_M_contig1132:216810..216980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1132.5.1mRNA_A-nodosum_M_contig1132.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1132 216715..216980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1132.5.1 ID=prot_A-nodosum_M_contig1132.5.1|Name=mRNA_A-nodosum_M_contig1132.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=57bp
ACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQAVIQDDYLSWV
GKRLCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin
IPR002429CcO_II-like_C
IPR045187CcO_II