prot_A-nodosum_M_contig1131.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1131.29.1
Unique Nameprot_A-nodosum_M_contig1131.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length485
Homology
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BLAST of mRNA_A-nodosum_M_contig1131.29.1 vs. uniprot
Match: D8LF36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF36_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 6.970e-27
Identity = 128/201 (63.68%), Postives = 142/201 (70.65%), Query Frame = 0 
Query:   17 CKFCQKAIVKEEKHSGEFYSVASSGEKGADKIHTECWEAYHEKTAEKCLHCQGPVAHLPGRFNGKHYVSKDPEGXXXXXXXXXXNASSSPTEXXXXXXXXXXXXXXXXXXNYVELENGVKLHAECKSAYRKANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRKKEGFSGDFSVID 217
            C FC   I K+E HSG FY+V    E+    IH ECWE YHEK + KCLHC+GPVAHLPGRFNGK Y S DP  XXXXXXXXX   S    E                  +YV L +G+K+H EC+SAY + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VR+ EGFSGDF +ID
Sbjct:   17 CGFCHAVIAKDETHSGVFYTVP---EEEGGTIHQECWEKYHEKCSVKCLHCEGPVAHLPGRFNGKFYPSTDPPXXXXXXXXXXYKGSKPAAEKCGECGEPLSFVEGKFSGSYVTLGDGIKVHVECRSAYHQKHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAVRRMEGFSGDFMMID 214
[Close]
BLAST of mRNA_A-nodosum_M_contig1131.29.1 vs. uniprot
Match: A0A835YPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.200e-17
Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 0 
Query:   16 TCKFCQKAIVKEEKHSGEFYSVASSGEKGADKIHTECWEAYHEKTAEKCLHCQGPVAHLPGRFNGKHYV 84
            TC  C++ IV +EKH G F+++  +G   A KIHTECWE Y ++ AEKC+HC+GPVA +PGR++GK + 
Sbjct:   14 TCGHCEQTIVADEKHKGTFFTITEAG--AAGKIHTECWEVYQDRNAEKCMHCKGPVAQIPGRYSGKFFA 80
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1131.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF36_ECTSI6.970e-2763.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPW2_9STRA1.200e-1752.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1131contigA-nodosum_M_contig1131:212876..219115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1131.29.1mRNA_A-nodosum_M_contig1131.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1131 212719..219228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1131.29.1 ID=prot_A-nodosum_M_contig1131.29.1|Name=mRNA_A-nodosum_M_contig1131.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=485bp
MPKLWRTKKDVPKFYTCKFCQKAIVKEEKHSGEFYSVASSGEKGADKIHT
ECWEAYHEKTAEKCLHCQGPVAHLPGRFNGKHYVSKDPEGKVHSECWEAF
NASSSPTEKCSQCNEPLTILAGKFSGNYVELENGVKLHAECKSAYRKANT
EKCLQCCEAIVLEKGKFSGRYFELEEEGRVHAECYEEYAEATADKCPVCK
QAVRKKEGFSGDFSVIDDGKVHRECWEAYHEKTAEKCLHCQGPVAHLPGR
FNGKHYVSDDPEGKVHSECWEAFNTSSSSMEKCSQCNEPLAIVAGKFSGN
YVELENGVKLHAECSSAYHKANTEKCLQCSEPVVPEKGKFSGRYFEVDGE
GCVHAECYEEYAEATADKCLVCKQAVRKKEGFSGDFTVFDDGKVHRECAS
EYLEMRADKCLVCNKGVRKAGDFSGAYHLVDRSDRKDREPEVTGGKGKTV
EASQAGKETRQAKVHIECFEAYQAKLATEREESA*
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