mRNA_A-nodosum_M_contig113.106.3 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig113.106.3
Unique NamemRNA_A-nodosum_M_contig113.106.3
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.106.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:846739..856844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G8I7
Preferred nameZRANB1
PFAMsOTU,zf-RanBP
Model size1558
Max annot lvl2759|Eukaryota
KEGG koko:K11860,ko:K11862
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006928,GO:0006996,GO:0007010,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009653,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016043,GO:0016477,GO:0016579,GO:0016787,GO:0019538,GO:0019783,GO:0019941,GO:0021551,GO:0022603,GO:0022604,GO:0023051,GO:0023056,GO:0030111,GO:0030163,GO:0030177,GO:0031593,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0035523,GO:0036211,GO:0036459,GO:0040011,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0051179,GO:0051603,GO:0051674,GO:0060322,GO:0060828,GO:0065007,GO:0070011,GO:0070013,GO:0070530,GO:0070536,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0071947,GO:0090263,GO:0101005,GO:0140030,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1990168
Exons5
Evalue3.7e-07
EggNOG OGsKOG4345@1|root,KOG4345@2759|Eukaryota
EC3.4.19.12
Descriptionprotein deubiquitination involved in ubiquitin-dependent protein catabolic process
Cds size528
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.106.3prot_A-nodosum_M_contig113.106.3Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig113 847769..856844 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866533.9738667-UTR-A-nodosum_M_contig113:846738..8477681680866533.9738667-UTR-A-nodosum_M_contig113:846738..847768Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig113 846739..847768 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866533.983951-CDS-A-nodosum_M_contig113:847768..8478371680866533.983951-CDS-A-nodosum_M_contig113:847768..847837Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 847769..847837 +
1680866533.9948335-CDS-A-nodosum_M_contig113:848046..8481621680866533.9948335-CDS-A-nodosum_M_contig113:848046..848162Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 848047..848162 +
1680866534.0037625-CDS-A-nodosum_M_contig113:848519..8486191680866534.0037625-CDS-A-nodosum_M_contig113:848519..848619Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 848520..848619 +
1680866534.0144334-CDS-A-nodosum_M_contig113:856051..8562191680866534.0144334-CDS-A-nodosum_M_contig113:856051..856219Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 856052..856219 +
1680866534.0260644-CDS-A-nodosum_M_contig113:856769..8568441680866534.0260644-CDS-A-nodosum_M_contig113:856769..856844Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig113 856770..856844 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig113.106.3

>prot_A-nodosum_M_contig113.106.3 ID=prot_A-nodosum_M_contig113.106.3|Name=mRNA_A-nodosum_M_contig113.106.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=176bp
MRQRTKMSLVSGLEPLVPIGLSTSTFALPAVEHSLREPYLEHHVLNLLAD
QLEWTPPGLSDRSRMQLWPVNSTVDVDCLFHSVSVALWGCNDDQLDRSSH
DGQVPRMLPHTDRGRVDVHRGSIPTDRPRRGLQGTVACAFGHAWRRPPAG
DALGGRGPCQETRRVHVHRAVSRGRR
back to top

mRNA from alignment at A-nodosum_M_contig113:846739..856844+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig113.106.3 ID=mRNA_A-nodosum_M_contig113.106.3|Name=mRNA_A-nodosum_M_contig113.106.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=10106bp|location=Sequence derived from alignment at A-nodosum_M_contig113:846739..856844+ (Ascophyllum nodosum dioecious)
CCGCGTCAGTTGGACCAGTACGGATGTTAGAAAGTACTGAGTAGAGACCG GAACGGCTTTTAATGTGAAGACAACAACAATGGCCACACATATACAGTAG CAAGAGTATCGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGC TGAACAGGGAAAATGAATATTTCCCTGATCGATCGATTGATCAAATTTTC ACACAAGCTAATTTAATGTCAAAAATCCCGTTCTACTTCAGAGTGAATTA TTTTACAAGACAGTATGAAAGTATGTCCAAGTATGTATGTATGGTCATCA CACATAGCAGGGGTAATGATCAACCGGTTAAGGTTAACAATCTTGCTCGT GGTCAGCTGAACAGGGAGAAAGAACATTTCCCTGTCTCCGTTCGCGCCTG AGAATTTGGTCTCGCGAGACGGGTTCAGCCGTTCCGTCCCGCGTCAGCTT GCTCATTCTCCATACTCAGGCTGAAACTTCTTTGCCACGGAAATCGACCA CGGAATCCCTTCATTGCAAACACCCTAGACCAAGGCAGTAGGAATACCGT CCTGTAGTATACCGTATATAATAGAGAATGCTAACTACTTCGGTACGAAA AATGTTAAATACAGTATGTAGCTCTAGCCGTGCTGCTTACTTGTATACGC ACCTTCCCACTTCAGAAATTTCTTGAGAGATATTTCGGCTGTTGCATCCG TGTCTCTTGGTACAGTACCAAAATAATACTGTTCTGTATTTTTGTTAAGA AAAATCTGAACGCGCCTAGACCTTCTGAGCATCCCCCAGTCAGGGGGGAA AATGTAAAAAAACGATTAGGTGGGATCATGGGCTGCTGTATCGTACTGTT TGTATGTATTAATAAATAATGATTACTTGTGTTAACCCGCATCGTCTCTT CGTGCACCTGCGTACCTTACGAGCATGTCACTGAAGTGTCACAGCTGCGC ATTTTTTGTACGCGTAGGAGTTTCCCGGGACAGGAGACATCGCCAGGGCA ATCGAAAAGCAGCTGGAGAATGCTCTCGAGATGAGGCAAAGGACAAAGAT GTCGCTTGTCTCAGGGTTGGAGCCTCTGGTTCCCATTGGTCTCAGCACGG TAAGAAAACAAGAAAACATCACCTTTTAAATCTTGGCGAGTCGACTACCT GTTGAAAACTGTAGGGATGAACCAAGCCGCGAAGGTGTGTGCGTGCTCGG AGATACCGTCGAACAAAACTGACTTATGACAATAATTATGTAACTGACTT ATGACAATAATTATCTGCTTCTATCGGTCCGTACGGCGTAATTCGTGTTT CACCTCAGAGCACGTTTGCGCTGCCGGCGGTGGAGCACAGTCTTCGGGAA CCATACCTGGAGCACCACGTGCTCAACCTCCTCGCCGACCAGCTCGAGTG GACTCCTCCGGGTTTATCCGACAGGCAAGGCAACCTCTCGCGTGTTCCGG TTTGCAAACCACACGCACCGCTCCATGTGTCTCTTGTCTTTATGTCTGCT TGTGTCTATCTATAATATGTACCAGGTAGTGTTTTTTTGACGAGTGACCC AATAAGGCTGCAAGGATGACGTCAAAGTGGTCGATTGCTCTTAACCAGCC CCCATCCCCGCTGCAGTTTCACGTGTTGTATTTTCTATTAATAGGAAGAA GCTCGATCGCAATGACTTGATCAACGTTCAATGTACTCGTTTCCACCTCC GTCCTCCTGCCCGTTTCCGTGCATTCCCTACCCTGCGTTATCGTACCATG CCGTACCGTACCCTGTGTCTCGTGCCGATAGAAGCAGGATGCAGCTGTGG CCGGTGAACAGCACCGTGGACGTGGATTGCCTCTTCCATTCTGTGTCCGT AGCCCTCTGGGGTTGCAACGACGACCAGCTTGTGAGTGGGGACTGTAGCA AAAAAAGGCGTCGAGTATATAAATATATTACACCGGTACAGTATTAGACT ATTAGACTATTAGACTATTAGACTATTATTATAGACATAAGGAGTGGAGT AAAAGGCGAGCGGGTGCGATCGATGTTTAAAGAAAAATCAGACCACACCT AGACCTTCTGAGCATCCCCCGGTTATGGGGAAAAAAATGTCAAAACAAGT TTTGGATAGCATCAAGGTTAGAATGCGCCGCATATCAAAACACTAAACAC TAAACACTAAACACTAAAAGTACGAGGGTGGCAGTCTCGATCAATCTCTC GGTATGGTAGGTGAGAGTTTTCAACCCACCCCACCCTTTTCAACTATAAT ATTATTAATGCCTTGTCGTAACTAATAATAATATAAACTATCCTAACACA TACTTTTAGGGCGGAAGCGCACGGTGCAGCGGTAGCAGTAGCTCTCCAAA GGAAATAATAATGTCATAGTTCAAAACTGTACTTGTTAACAGAGGAACCC GGGTCCCCGCCCCCGCCCCCTCCCAGTCCTTCCCGTTGAGGAGGTGAGGA GGTGTCGGATTGAAGGCCTTAGCCTAAGTGCACACATCGGATGTACTGCT ACTGATCGTCGCTTTGTCATGTTCTTTACTGTAATTGCTAATGGTCACAA AGAGGTACGAAGGTCAACGGGTCACACCATAGTGACAACCCGCCACTCAA ACCAAACAGGGATCCAAATCGCGACAAAACCCTTGCCAGATCCAACCAAC CGAGAACATCGGAAACTTATCGGAAACTTATCGGAAACTTATCGATGGCT TTGGGTATGAACTAGAGTTTTTACTGTCTATTAATGGAGCACTGCCAGTA TTTCAAAATATGAATTACAAGCTATGATACAGAGAAGACTGTCTGATGTG CTGCCCTGCCCATCCAACAAAGTCATCAAGAGTGACTCAAAATATTTTCT AGCTCTTCTCTCGGAGGGTGACACGAAGACAAGTTATGCGACACTTAACA AGCAATGGCACCGACCAAATGTCAAAACATCTCATCCATCCTCCTTATTC CATATCGAGAGCAACCTCGATCGACTCGGATTGTTGTCGCCTAACCACGG CCAGCGTTCTCAGCAACAAAGCGGACAAAACACGCTCCAATCAGTTTTGA TCAACACGCCCAAGCTTGTCGAGGCCACACGTCATGCAGAAATATGGAAA ATTAAAATACCGAGGTCCATGGTGGTGGGGGCCTTGAGCTGGTGAAGCCG GCGCGCGAGCCAGCATCCAGCCGTCCAAAGCCCTGTGCATCCCTGAAAAA CGCCCCACGAATCTTGCCCGTTTGCCGCTCCTTGTTGGCCCTCATGGGAT GAAAACAGACTCGAGGTCAGAGATCAGCTTTTCCCTCAGAAACAGAAAAC CTCCCGGTTCGCGCCTTTGATTCTCGCGCACAGGGGTTGAGCACTCCCCT GGCTCGTCGACGATCGAGCTGCCTTCCGCCCTCGCCGAATCTGGTGCGTA CTCACCCGATAGAGCGCTACCAGGCTTTCCGCGACAGTGCCCCCTATCTC TTGCGTGCCACCATTAATACCTTAATACCTCCCAAAGGGCACTAAGTTGG AGCTCGGAAGAGGCGCACCTGGTGAACACCTGCCTCAACCAAACATACCG CCGCCGCGTCTCAACCGACCGGCTGAAAGGCGAAGACAGCCAGTTGGCTG CATTACTTACGTGTATGTAGTACTAATATTATATGAAGCAGTGAAGCTAG GGCGCCGACTGAGACGTGTATATAGTACTAATAATAGTATCATACGAAGC AGGTATCCTGCCGGCATTCGCAAAACTCTTACAGCACCCGTCACCCTCTG GACATGAGTTTTGTTACTGTTGGTGTCGAGCGATGTGTGATCTGACGCTT GATTTTGTTGGTGTTGGGCGATGTGTGATCTGATGTGATCTGATCTGATC GGAGGGCCACCGATCTTCTGTTACACAATTAATGCCCGAGCGAGTGAAAA GTTCTCTGGCCTGTGTCGGGGAGTTGGATCCTCTCTATTTCCAAGTGTTT CTACAGACCTCGGGATAGCAAAAAAAAAAAAAAAGACTTGGACTCTCGGA ATATCTGGTGACGTAGTGTAGTGTAGTGTAGTGCACCCTTTTAGCTTGCA GCACTCGACTTCACACGCTTAGTCTCGAGTTGAGTTGGGGCGATCACGAT CACAAGCATATCTCGCGCGTGAGCCGGTGGCTGCCTCGTCGTGGTGACTC TCGTAATGGTCAATGAAAGCGACCAAAATGAAAAGCAGCCATAGGGCTAC AGGAGTTTCCGACCTGTCTCTGATATTTCTCGCTCGGGTGTTGCTTTCCT GCTGAAGAAAACCCTATTTCTGTGAGAACCGTAAGCAAATGATGCTGTTT TATTGATACTTGTACTCTTATTATAAATACTTAAGACTATTGATATGATA GCTTCTCGTACCCGCCAGCCACGGCAGGTTGACGGCTGTGGCACTCTGCT GATTTTTTGTCTACAAGTAACAATATTGCGTGCGCTCTACCTGGCAGGTT TTGCATCTACCTCCGCAAAACCTTATGGTTTTGGCTCTGTGAATGCCTCC CCAGTTACAGTACACAACTATTTTTTTAGCCCCCGATTCTATTAATAGGT GGGGAATCGCTGAAATATAGGGTGGGGGTAATTTTTCAGGGGCCAGGCGA CTTTGACCGGCTAATTTTTGAAAACTGGTAGATTTCAGCCCCGCACTTGC CCTCGTGGCCCGAGTGGTCTATTAATAGTAGGTAATCTCCCACACCTGGT AGTGCGGAAGTCGTGAGTTCGATTCTATGTGAAAGCAAGATTTTTATTCT GGCGTCCGTGGCGGAAAACGTGAGAACGTGAGTAAGCAAAAACTAAATTC AATCATTGTTGGTTGACGAGGAGTAAGAGTATGTGTTGAACTCGGCTCGC TCGCGATAAAAAATCGTAGTGGTTTGCAAGACCCCAGAATGAGAGGGGAA GATCCTTAGTGATGGTGACCACAGGAAGCATGGCAACGTTGCAGTATTAT ACCAGGTACAGCAGGTGGGATTGGTAACCTATTATAGCACGTTGAGGCTC ATCGGCCATAAGACGTGTGATACAAACAACATTGACTTTCTTAAAAATGG CCTCTGAAAAATGATTATTAATAGAGCTAATGGCGATAAGATGGGGCATA GTATAGGATGGTACAAGAGCGCGAAGACAAGTACTGCACGATGGGATATT CATAGGATAAGATAGGAAGCGCACTCGGGTTCTCCTCGGCGAACACTGCA CTGTACAGGCAACCGTGGACATCGTCCTATTTCATAGATCTCTAAAACTA TTCCCAGAGCATGTAGAGATACTGCAATTAAATATCGTTATAATACAAGT ATTAAATGAAAACTGCTGCACGCGTACCGGGGGGTGTGCAGACAACTCTT ACGCCATATACTTGAAGTGAAACGACTGTACGTGGTATGTTGTACTATTA TACTATTAAATACCTGTAACGATTAACATAATAAAATAATAGCTCTATCA AAGGTGATACAAATCGCATCAATGTTTAACTTTGAACTATTAGTCTATTA ATAGTAGTACTGATAAAAAACACACACTTATTCATACTAATAATAATATG AATAGGAGTACAGTACTCTGCTCTCTCTTGGAAATACTATAGTAACAGGT TATAATTCGTCAAGTTCTAACGCCTTGCTCTATTAATTGCTATAGCATAG TATTGCATAGTAGAACAAGCGCAAGTTTCTCAAAAACCATAAGGTCATGC AGAATAAAAGGAAAATTGAAATACCGAGGTCCATGCAGGCCTTGAGCTGT TGGGGCCGACTATAGACCAAGATAGTACTATTATTAGTACTATTAACGGA GAAGCAGGGAGAGAGCACGTGGCAGATTTTTAAAAAAACGAAGATGATAA ACAGAAGCATGTAAAATATTATATTATCGTCCTACAGTTCCAAATGTTTT CTGGAGATAAAGAGGCAATATGAAAAGAGGGGGGCGTCTCTCGAACATAT AAATATACTATTATACTACACTGGTACTACTGTACTGGCTGTAGTATTAA TAGACTCCGGCACATGCGGCACGCATCGGTGGCGTTCCATTACACGAAAC TGGTATGATACTGTATTCATACTGATACAGGTGCTGCGGAAGCTGGTGGA GACAGTGTTGGAGCATGATCACGCCAAACTCCGCAACATCTGGGCAGAGA GGATGAAGGCCAGGATGGATGAGAAGGAGGCGAGCTGTACTGAACGTGAT ACTTTACTCGTAACTGGCATTTACTGAGTAGTTTTAGTCTAATGGTGTAC TCTAAGCTCTATTTAATTAATAGCTCCAGCTCTATTTCTAGCTCTATTTT AATTATTAATATAATATTAGTATAGTAGTGGTTCGTGGTTCCGCCAGGGA AATTATAGTATTAATAGTACAGTTAGTAGTTGATCGGAAAAAATAATAAA TAAAACGTTTTCCTGAAATGATCGGCAAATAATGTCCTATACCGTGGATA TTAAATGACTCTTGGTACATTGTTTCAGTTGCTACAGCATATTCGTAGTA TAGTACGAGGTATAGTTGTTGTTGTTGTTGTTGATTCACACATTCAGCGT ATTGTCCTTGCAACTGAAGAAACTACGGTGACACAACAAGTCAGGCATAG ACCTATCAAATGCCAATCCCGCTTGTGGTCAAAAAGAGGTACGAAGGTCA ACGTATAGTATAGTATTCATACCCTTGGAACAAACGCAAAAACCTTGGTG ATGCTGCGTGATTGGAATGATCAGTCGGGGCCGGATCAGCTCATCATCTC TGCAACATAGAAAACCGCAAAAAAAAAGACATGGAACGGAATTCACATAG GATCTGCTCTAATTTGTTGCATCTCAATCGATCGGGCCACATAAAGCAAC TGAATACATTTTATGACTATGGTATTGTAGTACTGTGTTGTACTGTACAC TAATAAATTACGTACACCATCCAATCCTAGAACCTCCCCGACATTATACT GTCTGTGGACCCAATGTTATCTGCATCGGGGAACCTGTTTAAATGCCAGG AAGAGGTTTTGTATTTGCAGCCTTTGAATACCCTTGCATGACAATTAATG AAATTATACAGTATATCTAGACAATTAATGAAATTATACAGTATACTAGT GTACATTTGACTATTTACCCAAGCCTTTATTTCTGTATGTCTCGATGGTA CTGTTATCGGCAGTAGGACTATACTCGTAACTGTGTATTACTGTGGTTAT GTTGGGGTATGATTGGTGGCTGTGCATGGTGATTAATATAAGTGTACAGT ATGGCGGTGGGCTTCTCCCCGATATTATACTGTTGACCCAATGTTACTAC CAGTGGGGAACCCGTTTAAATACCATGTAGTGGCTTTGTATTTATAGCCT TTGTAATGTATATTACTACTACCATGTGTCATGGTGTACTACATTGTCTC TGGTTTTTTCTAATGTTATTCTGGTGTCCCTGCATGGCGATTAATGTAAA TGTACAATATAACGGTGGGTTTCTCCCCGACATTATACTGTGGACCCAAT GTTATCTGCATCGGGGAACCTATTTAAATACCATGAAGAGGTTTTGTATT TGCAGCCTTTGATCCCACCTAAACGTTTTGACATTTCCCCCCCCATAACC GGGGGATGCTCAGAAGGTCTAGGTGTGTTCTGACTTTTCTTCAAATACTG TACCGCTTGTAACCTGGCCCTCGCTCATCAGGTCCAAAGGGGCTGGGACG AAATCGCGAGGAAGGACAGCTCGCATATATTTAATCTCTACATCTTGGCC AACATCCTCCGGAGGCCGATTGTTCTGATGAGCGATGCATACCAGAGGCG GGCCGATCACAGCGCCATCGAGTCCGCGCCACTATACCCCGAGTGAGTGA TCAATCCCCGGTACTGTACTGTACTGTACTGTACTGTACTGCACTGCACT ATCATATTAATAGACTATGGCTTTAATATTATAAGTACGGTATATGTATT TATTGTATCATACTACTTCTGTATTTATTGTACTCTACTCTACTGTGCTG GAGGCTGGAAATGATGAAGTAGTCGCTCTCTATACTATTAGTAGGTCTAC AGCAGTACAGTGTTAGTATTACAGTATTGGTGTGGTCCAAACATAGACTA CAGGTGGTACAAACAGCAGGCACAGTATAGTATACTGTCTGTACTATACT GTCAAAGGTATACTATACAGCAGTTTTGAAACGATATTATTAATATTTAT AGTGTACTGTGTACTGTTGTCGAGAATTTGGTCTCGCGAGACGGGTTCGG CAGTCCCGTCCCGCGCCAGCCTGCTCATCTCCATACTCAGGCTGAATCTG GTGCTTAGTTATGGGACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCAT TTATTTATTTTAAACCACCATACGCCATCGGGTCAGTCCCGAGTTCATCC GGTCACGCAATTGCGTATCGATGTCGTTGTTTCACAGCCGAGAGTCCGCC GGTACAAGGCCAGTAAATCTCAAGGTAGTTACAGTAACGGGTGCTGCCTT GGCACATACATCACCATGGACCAATGAATATGCGCCTCTCTTTCCCACCC CCACTATTGGTATGAAGCGGGCATGTTGAAAGTACCGGCGGTTAATATAG AGCTACTACCTAAAGTATTAATATCTTTGTTGTTTATTAATATGTCATAG TTAGTTTGGTAAGTGTGTGCTTCTCGAATATGTACTGTATCTTTGCCTTC CCCTGCCTCCACCTTTGCTTTGCACACTTGTTAACATTATACTTAATACA GCATCATAAGTTAATATTATAGTTAATACGAGCTAGCCCAGCCCCACACT ATTAATAGTACTTACGATACAGTAATACGAGCATCCTTTAAATTGAAGTA AGTGGTTCAGCACCTGCAATAATAGTAATAATAATAGGCTCTAATAATTT GTTGTAATAATAGTAATAATAAGAGGCTCTAATAGTTTATTTTGTTGTAA TAATAGTTAATAATAATAGGCTCTaAATAGTTTATTGTAATAAATAGTAA TAATATAGTAGGCTCTAATAGTTTCTTGTAATAACAGTAATAATATTAGG CTCTAAATAGTTTATTGTAATaaaTAGTAATAATAATAGGCTCTGATAGT TTATTGTAATAATAGTAATAATAATAGGCTCTAAATAGTTTATTGTAATA ATAGTAATAATAATAGGCTCTAAATAGTTTATTGTAATAATAGTAATAAT AATAGGCTCTAAATAGTTTATTGTAATAATAGTAATAATATTAGGCTCTA ATAATTTGTTGTACCTGTACCTGTACCTGGTATGCAATATGCGACTCTTA TCCCCGACTTCAGGATCGTTCTTCCCACGATGGTCAAGTCCCGCGAATGC TGCCCCACACCGATCGTGGTCGGGTTGACGTGCATCGAGGGAGCATTCCA ACTGACCGCCCTCGTCGGGGTTTACAAGGCACTGTCGCATGTGCATTTGG CCATGCTTGGAGACGACCTCCCGCTGGTGATGTGAGTACAGTACAGTACT ATAATTTGTAATCTGCAATCTGTAATTGCTTTTGTTTGTAAATATGGTGA CTAAATTATTTTCGACAGTTTGGCTTGAGAAGCCTACGGCAAAATGTTGG CAAAAAAAATATGTGACATGGTTTTAACACGACTAGTTTACAAGTTTTAC AGATGTAGAGCTACAAAATGTTATGGCAATATCCGCTGTTTACACTCTTG ACAAAGACACTATTCCAGGTCGAAACTTTTTGATGGGAGTACTTTTCGAC TAATAATAGTTTGCGAACACTGCTATGTACTCGGTCAATAATACTAAACC AGGTATATAATAGCACATACATACAAGTGTACAAGTATTCCTTTTTCGTG GTTGGGGTTTCTACTGTAGACCATATGTTGGGTGAAATGAGTAGAATCAC ATTTCCTGTGCTCGTACCTATACTGTAGCTACTATACTTTCCGTTTTGAC TACAACCAGGTAGACTATAGTGTCAGTATTAATAGTAATACAAACTGTAC ATGATCGATGTGTGTCGTGCGTTCGAAACAGGCGCTGGGAGGCCGAGGAC CATGCCAAGAAACTCGTAGAGTACATGTCCATCGAGCGGTTTCGCGCGGC AGACGG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig113:846739..856844+

>mRNA_A-nodosum_M_contig113.106.3 ID=mRNA_A-nodosum_M_contig113.106.3|Name=mRNA_A-nodosum_M_contig113.106.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=528bp|location=Sequence derived from alignment at A-nodosum_M_contig113:846739..856844+ (Ascophyllum nodosum dioecious)
ATGAGGCAAAGGACAAAGATGTCGCTTGTCTCAGGGTTGGAGCCTCTGGT
TCCCATTGGTCTCAGCACGAGCACGTTTGCGCTGCCGGCGGTGGAGCACA
GTCTTCGGGAACCATACCTGGAGCACCACGTGCTCAACCTCCTCGCCGAC
CAGCTCGAGTGGACTCCTCCGGGTTTATCCGACAGAAGCAGGATGCAGCT
GTGGCCGGTGAACAGCACCGTGGACGTGGATTGCCTCTTCCATTCTGTGT
CCGTAGCCCTCTGGGGTTGCAACGACGACCAGCTTGATCGTTCTTCCCAC
GATGGTCAAGTCCCGCGAATGCTGCCCCACACCGATCGTGGTCGGGTTGA
CGTGCATCGAGGGAGCATTCCAACTGACCGCCCTCGTCGGGGTTTACAAG
GCACTGTCGCATGTGCATTTGGCCATGCTTGGAGACGACCTCCCGCTGGT
GATGCGCTGGGAGGCCGAGGACCATGCCAAGAAACTCGTAGAGTACATGT
CCATCGAGCGGTTTCGCGCGGCAGACGG
back to top