mRNA_A-nodosum_M_contig1128.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE) HSP 1 Score: 102 bits (255), Expect = 7.650e-20 Identity = 81/271 (29.89%), Postives = 118/271 (43.54%), Query Frame = 1
Query: 436 QTPLHGAVICGGNPETIAALFRHGADDGALDGRGDPPLHVALLHGKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNS---------------------------VGASETSCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASIGNLEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEAAARNRVAAIRALVEAGAD 1167
+T LH A + G N E L A D G PL A+ + L+ G D+N R SK+ TAL A GNV++ +LV NGAD+ G +PL FAV +N V A+ + E L+ +GA+++A D G +PL+ AV+ + L+ G DVN R D+ L VAA+ GN+++ L+ +G D+NA + G+ PL A N+ L+ GAD
Sbjct: 3696 RTALHVAGLTG-NVEMANVLXXXXXXINAQDINGYSPLIFAVDNNHTKITEYLINHGADVNLRGSKDNRTALHVAGLTGNVEMANVLVSNGADINAQDINGYSPLMFAVYKNHTETVEFLINQGADVNLRGSKDNRTALHVAAATGNIEMSNVLVSNGADINAQDINGYSPLMFAVDNNHPETAEFLINQGVDVNLRGSKDNRTALHVAAATGNVKMANVLVS-----------NGADINAQDINGYWPLMFAFITNQTETAEFLINQGAD 3954
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A2V8L3T8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8L3T8_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 4.980e-16 Identity = 88/276 (31.88%), Postives = 119/276 (43.12%), Query Frame = 1
Query: 418 KSAVGGQTPLHGAVICGGNPETIAALFRHGADDGALDGRGDPPLHVALLHGKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNSVGASETSCEAITALLLHGAEVDA-------------ADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASIGN--------------LEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEAAARNRVAAIRALVEAGA 1164
K + GGQT L A +PE + L HGAD A PL A G + L+ G D+N K+ +TAL AA GN + +L+E GA+ + G T LH+A + E + + ALL HGA +A + G TPL +A + V AL+AGGAD + APL VA GN EV K LLG G DVN++ +G + L+ AA + + +R LVE GA
Sbjct: 23 KESRGGQTALMWAAA-NKHPEIVKLLVEHGADVRARSKGDFTPLLFAAQQGDVESGRTLLGAGADVNENRRKDRMTALMVAAASGNNEFSVLLLEKGANPDLADEIGYTALHYAA------SDEKRVDVVKALLAHGANPNARTTRDAPRTNNSGVSSKGATPLFLAASLGNVETVRALIAGGADPFV-TTDEKTAPLHVATWGGNPYNRDWTEEEKKNLFEVTKLLLG-----------LGADVNSAGEQGWTALHGAAYKGLDSVVRFLVEKGA 279
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A7S3SKS7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SKS7_EMIHU) HSP 1 Score: 87.4 bits (215), Expect = 5.350e-15 Identity = 75/244 (30.74%), Postives = 110/244 (45.08%), Query Frame = 1
Query: 436 QTPLHGAVICGGNPETIAALFRHGADDGALDGRGDPPLHVALLHGKESAIAAL----VAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNSVGASETSCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRN------------VVDDMAPLDVAASIGNLEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEAAA 1119
+TPL A G + E L GA D +D RG PLH+A+L K + L V+ + I+ S++G TAL A +GN K+L+ GA V G TPLH V + G S + L + GA+V+ + G++PL +A V AL+ GAD++ R +V M PL +A G + V++ LL G + ++ G SPL+ AAA
Sbjct: 113 RTPLAMAAWYGKSTEVAELLLSKGASDFLVDRRGLSPLHLAVLSMKADMVFVLCQNHVSQASLIDMPASRDGSTALHLAMRVGNQKAAKILLAQGASVELLDKDGATPLHRLVMQEDRG----SASMVRELQVAGADVNVRSSNGESPLHLAAVSGNALAVKALLDIGADIDARTGSVASQPGSDEELVAGMTPLSLAVQYGKVAVVRVLLS-----------RGASTSVASDAGASPLHLAAA 341
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0L850_MAGMM (Ankyrin repeat-like protein n=1 Tax=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) TaxID=156889 RepID=A0L850_MAGMM) HSP 1 Score: 85.9 bits (211), Expect = 2.390e-14 Identity = 70/196 (35.71%), Postives = 107/196 (54.59%), Query Frame = 1
Query: 439 TPLHGAVICGGNPETIAALFRHGADDGALDGRGDPPLHVALLHGKESAIAALVAGGT-DINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNSVGASETSCEAITALLLHG-AEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASIGNLEVLKALL 1020
T L+ AVI G + E + L GAD D G+ PLH A ++ + + AL+ G D++ R +++ LTAL+ A G+V+++K+L+E GAD + G+TPLH A +N + +E ALL G +VDA N +T L +AV K + +V L+ GAD N + + L +A G+ EV+ ALL
Sbjct: 889 TALNMAVIQG-HVEMVKLLLAVGADATLADEFGNTPLHNAAINNELACAEALLGSGKGDVDAR-AEHILTALNMAVIQGHVEMVKLLLEKGADATLADEDGNTPLHVAAIKNELVCAE-------ALLASGKVDVDARGNHSRTALNMAVRKGHVEMVKLLLEKGADPNSE--IFSGSCLHLAIFRGHEEVVSALL 1073
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A7R8WQV0_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WQV0_9CRUS) HSP 1 Score: 79.7 bits (195), Expect = 1.640e-12 Identity = 66/204 (32.35%), Postives = 99/204 (48.53%), Query Frame = 1
Query: 562 LHGKESAIAA--LVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNSVGASETSCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASIGNLEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEAAARNRVAAIRALVEAGAD 1167
LH SA A L+A ++N + + G T L A V+++L+ NGAD + +PLH A S E L+ GAEV+A D GKTPL +A+E + ++V+ L+A GAD N + D+ +PL A S E+L + G +VNA + +G +PL+ A NR + + L+ GAD
Sbjct: 268 LHQARSAGTAELLIAKRAEVNAQDER-GKTPLFVATDWNRHSVVEVLLANGADPNIASEVERSPLHQA----------ESAETAELLIQKGAEVNAKDRRGKTPLFVAIENNRHSVVEVLLANGADPNIASE-DERSPLHQAESAETAELL--------------IQKGAEVNAQDERGKTPLFVATDWNRHSVVEVLLANGAD 445
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A8B7PZ60_HIPAR (B-cell lymphoma 3 protein n=1 Tax=Hipposideros armiger TaxID=186990 RepID=A0A8B7PZ60_HIPAR) HSP 1 Score: 79.0 bits (193), Expect = 2.390e-12 Identity = 74/246 (30.08%), Postives = 114/246 (46.34%), Query Frame = 1
Query: 433 GQTPLHGAVICGGNPET--IAALFRHGADD-GALDGRGDPPLHVALLHGKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGA----DVRGSGPRGDTPLHFAVRRNSVGASETSC-EAITALLLHGAEVDAAD-NFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASIGNLEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEAAARNRVAAIR 1143
G TPLH AV+ G P + +LF+HG + + PLH+A++ S + LV G ++G TA A + L+ L+++ A D+ G T LH AV T C EA+ LL GA++DA D G++PL+ AVE KL++V L+ GA+VN + + + L A+ G L +++ L+ R G D N +PL A +R + +R
Sbjct: 135 GDTPLHIAVVQGNLPAVNRLVSLFQHGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVMAGAS-PMALDRHGQTAAHLACEHRSPACLRSLLDSAAPGTVDLEARNYDGLTALHVAVN--------TECHEAVLLLLERGADIDAVDIKSGRSPLIHAVENNKLSMVQLLLQHGANVNAQ-MYSGSSALHSASGRGLLHLVRMLV-----------RSGADSGLKNCHNDTPLMVARSRKVIDILR 359
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A6P8UG67_GYMAC (LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 61-like n=3 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8UG67_GYMAC) HSP 1 Score: 78.6 bits (192), Expect = 2.690e-12 Identity = 58/160 (36.25%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 484 IAALFRHGADDGA-LDGRGDPPLHVALLHGKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVR-GSGPRGDTPLHFAVRRNSVGA-----SETSCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNR 942
+ L HG + A ++G LH+++ + SA+ L G D+N S +G+TAL AA + + D++ L++ GAD+ G P G+TPLH AV ++ A +TSC I+ LL GAEV+A +N G TPL A LV+ L+ GA++N+
Sbjct: 123 LRLLCEHGVNLNAEVEGSQQTALHLSVRYTALSAVHILSCCGADVNAVDS-SGMTALHMAAGVLHKDIMVSLIKEGADLSMGLKPSGNTPLHLAVVAMALKAFKTQQDDTSC--ISELLERGAEVNAVNNAGMTPLHEACSMGNTELVELLLRYGANINQ 279
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A067MYR6_9AGAM (Uncharacterized protein n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MYR6_9AGAM) HSP 1 Score: 79.3 bits (194), Expect = 2.830e-12 Identity = 84/254 (33.07%), Postives = 114/254 (44.88%), Query Frame = 1
Query: 433 GQTPLHGAVICGGNPETIAALFRHGADDGALDGRGDPPLHVALLH-----GKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNSVGASETSCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASI----GNLEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEAAARNRVAAIRALVEAGAD 1167
G TPL A+I GG ++ L GAD G+ P+ L+ G+ A+A L+ D+N R +N L+ AA+LG+ +K L+ GAD G G LHFA E E + ALL GAEVDA D TPL+ A K A V AL+ GA+ + + +PL AA + E L AL+ +N N G +PL AA AA+R L++ GAD
Sbjct: 148 GNTPLSLAMI-GGLASSVRFLLSVGADPTKY-GQTSCPVPQYLIDVFNCAGEADAVATLLTASEDVNDR-DENDSRPLERAAWLGSPAAVKALLHAGADPNLPGRCGVRALHFAAELMCHPDGE---ETVAALLQAGAEVDARDGDEVTPLIYAAAKGSSAAVLALLNAGANPSLHDKWG-CSPLHTAAHLMGDPRGYEALAALI----------KTAPTTLNLVNVHGQTPLRLAAVTGSPAAVRLLLDTGAD 384
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: UPI001887C32D (ankyrin repeat domain-containing protein 61-like n=1 Tax=Pungitius pungitius TaxID=134920 RepID=UPI001887C32D) HSP 1 Score: 78.6 bits (192), Expect = 2.830e-12 Identity = 56/158 (35.44%), Postives = 81/158 (51.27%), Query Frame = 1
Query: 484 IAALFRHGADDGA-LDGRGDPPLHVALLHGKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPR-GDTPLHFA---VRRNSVGASETSCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNR 942
+ LF HG D A +G PLH+++ + SA+ L + G D+N S +G+T L AA + + D++ L++ GADV + G++PLH A + + E I LL GAEVDA + G TPL A LVD L+ GAD+ R
Sbjct: 136 LRLLFEHGIDPNAKAEGSHQSPLHLSVRYMALSAVPILASFGADVNAVES-SGMTPLHMAAGVLHKDIMASLIKEGADVNMAVKHSGNSPLHLAAVAIAMKTTKTLEDDVGCICELLERGAEVDAVNEAGLTPLQEACRMGHGVLVDVLLRYGADIKR 292
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Match: A0A7R8WJS6_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WJS6_9CRUS) HSP 1 Score: 79.0 bits (193), Expect = 4.190e-12 Identity = 72/248 (29.03%), Postives = 106/248 (42.74%), Query Frame = 1
Query: 439 TPLHGAVICGGNPETIAALFRHGADDGALDGRGDPPLHVALLHGKESAIAALVAGGTDINCRTSKNGLTALDWAAFLGNVDVLKMLVENGADVRGSGPRGDTPLHFAVRRNSVGASET-----------------------SCEAITALLLHGAEVDAADNFGKTPLVIAVEKEKLALVDALVAGGADVNRRNVVDDMAPLDVAASIGNLEVLKALLGGHVXXXXXXXRHGVDVNASNAKGHSPLYEA 1113
TPLH A +PET L + A D G PL A L+G+ S + L+A G D N + + L A + + ++L++NGA+V G+TPL A + E S + L+ GAEV+A D GKTPL +A + ++ ++V+ L+A GA N D+ +PL A S E+L R G VNA + G +PL+ A
Sbjct: 156 TPLHIAA----SPETARLLLEYKAKVDVKDSDGCTPLLQATLNGRHSVVELLLAHGADPNIANREYETSPLHHAE---SAETAELLIQNGAEVNAKDICGNTPLFVATGYDCHTVVEVLLANGADPKIANEDERSPLHEARSAKTAELLIQKGAEVNAKDRRGKTPLFVATDCKRHSVVEVLLANGAHPKIANK-DERSPLHQARSAETAELL--------------IRKGAVVNAKDKYGKTPLFVA 381 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1128.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1128.2.1 >prot_A-nodosum_M_contig1128.2.1 ID=prot_A-nodosum_M_contig1128.2.1|Name=mRNA_A-nodosum_M_contig1128.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=389bp AGADVKGRNDRGDTLLHEAVLWDSLEATVAVLRHGADVEAVNEKGETPLHback to top mRNA from alignment at A-nodosum_M_contig1128:52583..54510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1128.2.1 ID=mRNA_A-nodosum_M_contig1128.2.1|Name=mRNA_A-nodosum_M_contig1128.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1928bp|location=Sequence derived from alignment at A-nodosum_M_contig1128:52583..54510+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1128:52583..54510+ >mRNA_A-nodosum_M_contig1128.2.1 ID=mRNA_A-nodosum_M_contig1128.2.1|Name=mRNA_A-nodosum_M_contig1128.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1167bp|location=Sequence derived from alignment at A-nodosum_M_contig1128:52583..54510+ (Ascophyllum nodosum dioecious)back to top |