prot_A-nodosum_M_contig1123.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1123.5.1
Unique Nameprot_A-nodosum_M_contig1123.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length637
Homology
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 582 bits (1501), Expect = 3.410e-199
Identity = 320/605 (52.89%), Postives = 390/605 (64.46%), Query Frame = 0
Query:   37 GKITKRRVLITGAVAVCATVAVVLFITLSKSSGGSSLDAFAQASDPNSLGCFVDKRNDRVFPYVFRDATEMTPALCNAQCEDEGYSYYALQWGQECWCGGASVDIDR---HGESDDCDYPCPGDSDMICGGYLTVSVYEVGVEASTPETMTASCRGAAADISIEDDVVYITGGGCATLTDIYNADGTSDLLFVLDTRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSE--ELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCE---DLSNP---EVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWA--SDGRPSENTFDNNVFSNT--EVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACLDQDTEF 626
            GK+T++RV+  GA+   A +AV L++ L K    +        SDPNSLGCF D  + RV      D   MTP +CNA CED GY YYA+QW  ECWC   +   D    HG    CD+ C GDSD ICGG+   +VYEVG E++TP     +   +AA +   DD+ Y  GGGC TLT +Y A      L+VLD  + VV GGTPTG WLL  ++R+ DGSTL VHG +  GD DVLR+ S  S  + EVRG+GGNL F+ T VTSWDT+NG+E+     GRSFINCV++  + A  DCDG +N + GECRMDII S MGNMG+FD ESYGLTWKVRG CE   D   P   E+FE   VYGDI  SEIYGMYYG YSYGHQ GVW +NIMRDNI YGFDPHDDSDDL I+NN VYGNGNHGIIASKRC              E+AVGIFLHRSSD AEV++N +++MQ +G+A+MES +A+I+DN   N  +GIRLS+GS  + I +N F   T  G+ TY GSD P    S+GRPS+N FD N        +GV I++GDSNV           +E EDS+DTTW  NT   G CLD  T+F
Sbjct:   27 GKLTRKRVMAGGALLGAAALAVGLYVGL-KDDSSTDRTLITGQSDPNSLGCFADTSDGRVMEAQLTDQA-MTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGT-CDFACGGDSDQICGGFWAFTVYEVGTESTTPTPSATTSCDSAATVRFTDDIAYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVV-GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT--GGGCLDGSTDF 624          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 492 bits (1266), Expect = 1.790e-160
Identity = 278/609 (45.65%), Postives = 354/609 (58.13%), Query Frame = 0
Query:   84 SLGCFVDKRNDRVFP--YVFRDATEMTPALCNAQCEDEGYSYYALQWGQECWCGGASVDIDRHGESDDCDYPCPGDSDMICGGYLTVSVYEV-------------------------------------------GVEASTPETMTASCRGAAADISIEDDVVYITGGGCATLTDIYNADGTSD------LLFVLD---TRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACLDQDTEF--TSDSDAIPAC 636
            S+GCFVD  +DRV     +    + MT A C   CE  G +Y+  ++  EC+C  +    D  GE+ +CD  C GDS   CGG+  + VY +                                           G +   P    A+  G A  +       Y  G GC T+TD+YN  GT +       +++LD   T+  + SG   T  WLLAA++ I  G   Y  G S  GDC+ LRI+S GS  ++EVRGHGG+L F+ T VTSWDT N E Q TY  GRSF+NCVSE+L GDDC+G+A N+MGECRMDII+S +  +G+FD ESYG+TWKVRGFC+DLSNPEVFE T VYGD+ GS+I+ +YYG YSYGHQ GVW NN M DN  YGFDPHDDSD L IA NEVY N NHGIIASKRC                A GIFLHRSSD A V++N I +MQ +G+A++ES +A I+ NII    +GIR+S+GS  + +Y NSF   +  G+ TYEGSD P  SDGRPS N    N+  +  +GV I++GD N            FE  +ST+T WSGN I  G C+++D EF   S SD+IP C
Sbjct:  289 SVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCE--GSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLEDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSCGDDEDRPSFRYAASSGVAGRL-------YAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSG--ITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIPIC 885          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 3.140e-147
Identity = 257/456 (56.36%), Postives = 304/456 (66.67%), Query Frame = 0
Query:  189 GAAADISIEDDVVYITGGGCATLTDIYNADGTSDLLFVLDTRDRVVSGG----TPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAGD--DCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWAS--DGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACLDQDTEFTSDSDAIPAC 636
            G  A IS   D    +GGGCATLTD+YN    S  L+VLD+ + +VSGG    +PTG WLL + + I DG TLYVHG S  GD DVLRI+S     ++E+RG GG+LSF  T VTSWDT+ GEE+T Y GGRSFINCV++    D   C G +N + GECRMDIIDS MGNMG+FD ESYGLTWKVRG C DLSN E+ +   VYGDI+GSEIYGMYYGMYSYGHQ GVW +N+MRDNILYGFDPHDDSDDL IA N VYGNGNHGIIASKRC      XXXXXXXX                              ALMES  A+I+DN IEN  +GIRLS+GSA ++I+DN+FDS +  G+ TY+GSD P  S  DGR  +N+FD N  SNT+V + I++GD N            FE EDSTDT W+ N I  G CLD+ T+F S S  IP+C
Sbjct:  396 GTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDI-GGGCLDESTDFASGS--IPSC 845          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 3.360e-145
Identity = 232/444 (52.25%), Postives = 292/444 (65.77%), Query Frame = 0
Query:  207 GCATLTDIYNADGTSD------LLFVLD-TRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVR---------GFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACLDQDTEFTSDSDAIP 634
            GC TLTD+YN  GT +       L++LD +  ++ +  + T +WLL A++ + +G+  Y  G  E GDCD LRI+S G   +YEVRGHGG++ F  T VTSWDT N + Q TY GGRSF+NCVSE+L G+ CDG A NDMGECRMDII+S MG MGFFD ESYGLTWKVR         GFC+DLSNP+VFE T VYGDI+ S+I+ MYYG YSYGHQ GVW NN M DN  Y            +ANN+VY N NHGIIASKRC               +AVGIFLHRSSD+AEVY N I +M  +G+AL+ES NADIHDN I+   FGIR+S+GS G+++YDN F+ C+D G+ TY GSD P  S+GRP+ NTF+NN  +N+  GV  +  D+ V            E  D+  TTWSGN++PSG C+D  T    D +++P
Sbjct:   21 GCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITS--DDGNSVP 450          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 8.520e-141
Identity = 221/436 (50.69%), Postives = 283/436 (64.91%), Query Frame = 0
Query:  205 GGGCATLTDIY------NADGTSDLLFVLDTRDRV-VSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACL---DQDTEFTSDS 630
            GGGC TL+D+Y      N   +   +FVLD+ DRV  +  T TG+WLL AD+ +  G+TLY  G    G+C  LRI+S   S ++E+RGHGGNL F+ T VTSWD +  + Q TY  GRSFI CVSE L G+D    A N+MGECRMDIIDS MG +G+   E+YG+TWKVRGFC DLSNP+VF+   VYGD++GS+I+ MYYGMYS+GHQ GVW NN+M DN  YGFDPHDDSD LIIA N+VY N NHGIIASKRC               +A GIFLHRS DD+EVY N I +M  +G+A++E+   DIHDN ++   FGIR+ +GS+ + ++DN F +  + G+ TY GSD PW   GRP +N F NN    TE GV I++ D+              E  ++ D  WSGN+IP+  CL   D ++ FT  S
Sbjct:    8 GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDT--CAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSS 441          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 4.790e-139
Identity = 239/446 (53.59%), Postives = 288/446 (64.57%), Query Frame = 0
Query:  202 YITGGGCATLTDIYNADGTSD---LLFVLDTRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAG--DDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWAS---DGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXV---FEIEDSTDTTWSGNTIPSGACL--DQDTEFTSDSDAIP 634
            YI GGGCATLTDIY A G  +    LFVLD+ D VV GG+PTG WLL  D+ + +GS L VHG    GD  VLRI+S GS  YYE+RGHGG+LSF  TKVTSWDT+  +  T Y   RSFI CVSEELA   D CDG A N MGECRMDII S MG MG+   ESYG++WKVRG+C +  NPEVFERT V GDI  S+IYGMYYG YS+GH  G+W  N M DN  YGFDPHDDSD+L IA N V+GNGNHGIIASKRC              E AVGIFLHRSSDD EV+ N ++DM+ +G+A+MESM A IHDN   N  +GIRLSVG+A + + +NSF  C   G+ TY+G+D P AS   DG   +NTF  N     E GV I++ +  V              +  ED  D  W+ N +P   CL  D++ ++    D++P
Sbjct:  401 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVV-GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLP 842          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 6.150e-135
Identity = 262/585 (44.79%), Postives = 341/585 (58.29%), Query Frame = 0
Query:   86 GCFVDKRN-DRVFPYVFRDATEMTPALCNAQCEDEGYSYYALQWGQECWCG--GASVDIDRHGESD-DCDYPCPGDSDMICG----------GYLTVSVYEVGVEASTPETMTASCRGAA---------------ADISIEDDVVYITGGGCATLTDIYNADGTSDLLFVLDTRDRVVSGG----TPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSG-GRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACLDQDTEFTSDSDAIPAC 636
            GCF DK   DR+F YV     +MT  LC  +C+  GY+++ LQWG+E  CG  G +    R G +D DC      +S  +C           G  +       V + TP+T       +A               A + I+ D  Y   GGCATLTD+YNA   +  L+VLD+ D  V G      PTGRWLL ++++I D +TL+V G    GDCDVLRI+S GS  Y+E+ GHGGN+ F+GTKVTSWDT  G+E+      GRSFI C+++      C G +N DMG CRMDIIDS MGNMG+   ESYGLTWKVRG C++LSN ++F++  VYGDI+ S+IYGMYYGMYSYGH+ GVW NN M DN+ YGFDPHDDSD+L+IA+N                XXXXXXXXXXXXXX                              A +ES +ADI+DN I N  +GIRLS+GS  ++I +N+FD+ +  G+ TY+GSD+P  S+GRP  N F+ N  SNT++GV  ++GD N+           FE E S DT W+GN++  G CLD+  +FT  SD IP C
Sbjct:  102 GCFNDKPEPDRLFSYV-TTMDDMTTELCANECK--GYAFFGLQWGREAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSL-GGGCLDRGKDFTKGSDTIPDC 679          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.310e-131
Identity = 216/437 (49.43%), Postives = 283/437 (64.76%), Query Frame = 0
Query:  196 IEDDVVYIT----GGGCATLTDIYN----ADGTSD--LLFVLDTRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPW--ASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACL 620
            I DDV   T    G GC T+TD+YN    +DG++   +  + D+ + V++    + +WLL A++ I  G+  Y  G S  GDCD LRI+S G + ++EVR HGG++ F+ T VTSWDT N   Q TY GGRSF+NCVSE+L G+ C G A N+MGECRMDII+S +G +G+FD ESYGLTWKVRGFC+DLSNP+VF+ T VYG++ GS+I+  YYG YSYGHQ GVW NN M DN  YGFDPHDDSD L              IIASKRC                A GIFLHRSSD A V++N +HDMQ +G+A++ESMNADI++N   +  FGIRLS+GS+ +++++N F+  +  G+ TY+GSD P    SDGRPS+N F+NN   N   GV I++GD  V            E  D+ +T W GNT+P G C+
Sbjct:   71 IMDDVTGNTPDAEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCI 495          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 1.630e-109
Identity = 190/407 (46.68%), Postives = 228/407 (56.02%), Query Frame = 0
Query:  228 DTRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXVFEIEDSTDTTWSGNTIPSGACLDQDTEFTSDSDAIP 634
            D+ +++ S  + T +WLL +++ + DG+  Y  G  E GDCD LRI+S G   +YEVRGHGG++ F  T VTSWDT N + Q TY GGRSF+NCVSE+L G+ CDG A ND GECRMDII+S MG MGFFD ESYGLTWKVRGFC+DLSNP+VFE T VYGDI+ S I+ MYYGMYSYGHQ GVW NN M DN  YGFDPHDDSD L IA             ASKRC                AVGIFLHRSSD+AEVY                                                        G       DAP  S+GRP+ NTF+NN  +NT  GV I+  D+ V            E  D+  TTWS N++PSG C+D  T    D +++P
Sbjct:    4 DSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVY-------------------------------------------------------GGXXXXXXXDAPDVSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTS--DDGNSVP 353          
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 2.450e-108
Identity = 209/446 (46.86%), Postives = 255/446 (57.17%), Query Frame = 0
Query:  202 YITGGGCATLTDIYNADGTSD---LLFVLDTRDRVVSGGTPTGRWLLAADVRIHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTSWDTENGEEQTTYSGGRSFINCVSEELAG--DDCDGSANNDMGECRMDIIDSVMGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYYGMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGIIASKRCXXXXXXXXXXXXXXENAVGIFLHRSSDDAEVYNNYIHDMQGSGLALMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEGSDAPWAS---DGRPSENTFDNNVFSNTEVGVSIRQGDSNVXXXXXXXXXXV---FEIEDSTDTTWSGNTIPSGACL--DQDTEFTSDSDAIP 634
            YI GGGCATLTDIY A G  +    LFVLD+ D VV GG+PTG WLL  D+ + + S L VHG    GD  VLRI+S  S+ YYE+RGHGG+LSF  TKVTSWDT+  E  T Y+  RSF+ CVSEELA   D CDG A N MGECRM                                         V GDI  S IYGMYYG YS+GH  G+W  N M DN  YGFDPHDDSD+L IA N V+GNGNHGIIASKRC              E AVGIFLHRSSDD EV+ N ++DM+ +G+A+MESM A I+DN   N  +GIRLSVG++ + + +N F  C   G+ TY+G+D P AS   DG   +NTF  N     E GV I++ +                 +  ED  D  W+ N +P G CL  D +T++    D++P
Sbjct:  503 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVV-GGSPTGYWLLMRDIHVEEDSLLQVHGPDAGGDARVLRIQSTASNDYYEIRGHGGSLSFMDTKVTSWDTDEKEVNTNYNKERSFVRCVSEELADNPDTCDGHAVNHMGECRM-----------------------------------------VRGDIIDSNIYGMYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWENTVYDMEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLP 903          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1123.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8D9_ECTSI3.410e-19952.89Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LC73_ECTSI1.790e-16045.65Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FWE8_ECTSI3.140e-14756.36Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JGU8_9PHAE3.360e-14552.25MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI8.520e-14150.69Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE4.790e-13953.59MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LRN0_ECTSI6.150e-13544.79Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRM4_ECTSI1.310e-13149.43Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FIU4_ECTSI1.630e-10946.68Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LDB5_ECTSI2.450e-10846.86Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 527..549
e-value: 500.0
score: 9.4
coord: 481..503
e-value: 190.0
score: 10.8
coord: 385..415
e-value: 1100.0
score: 6.9
coord: 561..582
e-value: 320.0
score: 10.1
coord: 431..453
e-value: 2.6
score: 17.0
coord: 455..479
e-value: 140.0
score: 11.3
coord: 583..616
e-value: 8900.0
score: 0.4
coord: 504..525
e-value: 640.0
score: 8.6
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 81..174
e-value: 1.7E-6
score: 37.6
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 85..164
e-value: 9.8E-18
score: 64.1
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 81..174
score: 11.016464
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 389..545
e-value: 1.2E-13
score: 51.3
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 179..559
e-value: 1.7E-85
score: 289.4
NoneNo IPR availablePANTHERPTHR24269KREMEN PROTEINcoord: 77..620
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 232..475
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 431..629

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1123contigA-nodosum_M_contig1123:156729..169508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1123.5.1mRNA_A-nodosum_M_contig1123.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1123 155860..171774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1123.5.1 ID=prot_A-nodosum_M_contig1123.5.1|Name=mRNA_A-nodosum_M_contig1123.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=637bp
MVSTVDSVERAAVPTPASAPAPAQATSIWSEDYRPRGKITKRRVLITGAV
AVCATVAVVLFITLSKSSGGSSLDAFAQASDPNSLGCFVDKRNDRVFPYV
FRDATEMTPALCNAQCEDEGYSYYALQWGQECWCGGASVDIDRHGESDDC
DYPCPGDSDMICGGYLTVSVYEVGVEASTPETMTASCRGAAADISIEDDV
VYITGGGCATLTDIYNADGTSDLLFVLDTRDRVVSGGTPTGRWLLAADVR
IHDGSTLYVHGLSEDGDCDVLRIKSDGSSSYYEVRGHGGNLSFKGTKVTS
WDTENGEEQTTYSGGRSFINCVSEELAGDDCDGSANNDMGECRMDIIDSV
MGNMGFFDGESYGLTWKVRGFCEDLSNPEVFERTGVYGDIQGSEIYGMYY
GMYSYGHQDGVWINNIMRDNILYGFDPHDDSDDLIIANNEVYGNGNHGII
ASKRCDNLKIYDNEVYNGGENAVGIFLHRSSDDAEVYNNYIHDMQGSGLA
LMESMNADIHDNIIENTIFGIRLSVGSAGSNIYDNSFDSCTDAGVRTYEG
SDAPWASDGRPSENTFDNNVFSNTEVGVSIRQGDSNVFTNNVFTGTEVFE
IEDSTDTTWSGNTIPSGACLDQDTEFTSDSDAIPAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR002889WSC_carb-bd
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence