prot_A-nodosum_M_contig1122.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1122.3.1
Unique Nameprot_A-nodosum_M_contig1122.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length151
Homology
BLAST of mRNA_A-nodosum_M_contig1122.3.1 vs. uniprot
Match: D7G1V6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V6_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.400e-24
Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = 0
Query:    8 EDKVYAAFGFGGGLLLAFAQVPQIYRVQTRKSSSDISYAYQFTFATGIIMFLIYYGYNRRYPLLIPASISLAMILYLIALKTYLEVLAPR-----------LRAARDSLHHHGELQQVLLQGASDSSDVGAGEEEPGNRSSDDEFLSFKA 146
            +D+++ A G  GGLLLA AQ+PQIY V  R  S DISY YQF FA G+I FLIYYGYN  + + +P+ +SL  + YLI LK YLE + P+           LR   D       L + LL GAS        EE+ G    DDEF+++ A
Sbjct:   14 QDQLFRACGTAGGLLLAGAQLPQIYHVTKRGKSRDISYMYQFIFAGGMICFLIYYGYNGLWAVFVPSCLSLVCMCYLIGLKAYLEEMKPKRTVATQMINDLLRDDDDGFDDLDGLDRPLLGGAS--------EEKKG----DDEFIAYTA 151          
BLAST of mRNA_A-nodosum_M_contig1122.3.1 vs. uniprot
Match: D7G1V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V2_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.660e-18
Identity = 45/97 (46.39%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    8 EDKVYAAFGFGGGLLLAFAQVPQIYRVQTRKSSSDISYAYQFTFATGIIMFLIYYGYNRRYPLLIPASISLAMILYLIALKTYLEVLAPRLRAARDS 104
             D VY   GF GG ++A + VPQ+YRV  RK ++DIS+ YQ  F TGI+MFL++YGY   + L  PA  S+ + +YL  LK  LE    R  AA  S
Sbjct:    2 SDTVYDVMGFLGGCVMAASLVPQVYRVTVRKKAADISHTYQVVFVTGIVMFLVFYGYYELWELFFPALASMMLQIYLAVLKIRLERCPRRHTAAAPS 98          
BLAST of mRNA_A-nodosum_M_contig1122.3.1 vs. uniprot
Match: D7G1V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V3_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.810e-16
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    8 EDKVYAAFGFGGGLLLAFAQVPQIYRVQTRKSSSDISYAYQFTFATGIIMFLIYYGYNRRYPLLIPASISLAMILYLIALKTYLEVLAPRLRAA 101
             D  Y   G  GGL++AFA VPQ+ RV  RK S+DISYA+   F  G++MFL YYGY   + +  PA +S++  + L+ALK  LE    R RAA
Sbjct:    3 SDVPYNLMGASGGLIVAFAFVPQLARVIRRKQSADISYAHLMVFVGGLVMFLAYYGYYELWEVFFPALLSMSFAILLLALKIRLEEFPLRPRAA 96          
BLAST of mRNA_A-nodosum_M_contig1122.3.1 vs. uniprot
Match: A0A1E7FTB5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FTB5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.470e-6
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 0
Query:   16 GFGGGLLLAFAQVPQIYRVQTRKSSSDISYAYQFTFATGIIMFLIYYGYNRRYPLLIPASISLAMILYLIALK 88
            GF GG  ++ + +PQ+Y+    KS+ DISY YQ  +  G  + LIY    R +P+ IP ++ L +I+ L  +K
Sbjct:   10 GFVGGTTISLSLIPQVYKTFHSKSAGDISYYYQAIYIVGCTLTLIYAAALRLWPVYIPITLELTLIISLTVMK 82          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1122.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1V6_ECTSI1.400e-2444.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1V2_ECTSI2.660e-1846.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1V3_ECTSI1.810e-1646.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1E7FTB5_9STRA1.470e-636.99Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006603PQ-loop repeatPFAMPF04193PQ-loopcoord: 14..61
e-value: 9.9E-7
score: 28.4
NoneNo IPR availableGENE3D1.20.1280.290coord: 4..91
e-value: 6.5E-10
score: 41.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1122contigA-nodosum_M_contig1122:30565..44078 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1122.3.1mRNA_A-nodosum_M_contig1122.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1122 30067..45344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1122.3.1 ID=prot_A-nodosum_M_contig1122.3.1|Name=mRNA_A-nodosum_M_contig1122.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=151bp
MTSSYTYEDKVYAAFGFGGGLLLAFAQVPQIYRVQTRKSSSDISYAYQFT
FATGIIMFLIYYGYNRRYPLLIPASISLAMILYLIALKTYLEVLAPRLRA
ARDSLHHHGELQQVLLQGASDSSDVGAGEEEPGNRSSDDEFLSFKAQTDP
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006603PQ-loop_rpt