prot_A-nodosum_M_contig112.11.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig112.11.2
Unique Nameprot_A-nodosum_M_contig112.11.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length90
Homology
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BLAST of mRNA_A-nodosum_M_contig112.11.2 vs. uniprot
Match: A0A6H5JLQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ6_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 7.220e-13
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0 
Query:   18 QETRRPGRNEIAAAGYRVFCSGVDGSTGRAGQHGVGLAFKESIIRGATSTQELTNERLMSMTFNLTG 84
            QETRR GR E AAAG+RVFC G +      G HGVG+A KES+ + +T T E  +ERLM+M F L G
Sbjct:  124 QETRRAGRTEFAAAGFRVFCCGTETD----GVHGVGIAVKESLCKTSTFTTEFIDERLMTMGFLLAG 186
[Close]
BLAST of mRNA_A-nodosum_M_contig112.11.2 vs. uniprot
Match: A0A6H5KDS6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS6_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.650e-12
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:   18 QETRRPGRNEIAAAGYRVFCSGVDGSTGRAGQHGVGLAFKESIIRGATSTQELTNERLMSMTFNLTG 84
            QETRR GR E AAAG+RVFC G +  TG  G HGVG+A KES+ + +T T E  +E LM+M F L G
Sbjct:  152 QETRRAGRTEFAAAGFRVFCCGTE--TG--GVHGVGIAVKESLCKTSTFTTEFIDESLMAMRFLLAG 214
[Close]
BLAST of mRNA_A-nodosum_M_contig112.11.2 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.680e-12
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0 
Query:   18 QETRRPGRNEIAAAGYRVFCSGVDGSTGRAGQHGVGLAFKESIIRGATSTQELTNERLMSMTFNLTG 84
            QETRR GR E AAAG+RVFC G +  TG  G HGVG+A KES+ + +T T E  +ERLM+M   L G
Sbjct:   97 QETRRAGRTEFAAAGFRVFCCGTE--TG--GVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAG 159
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig112.11.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLQ6_9PHAE7.220e-1355.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDS6_9PHAE7.650e-1256.72Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBD7_9PHAE8.680e-1256.72Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig112contigA-nodosum_M_contig112:41715..51785 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig112.11.2mRNA_A-nodosum_M_contig112.11.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig112 41650..51843 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig112.11.2 ID=prot_A-nodosum_M_contig112.11.2|Name=mRNA_A-nodosum_M_contig112.11.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=90bp
MRPTQGGTAEPTQWRDTQETRRPGRNEIAAAGYRVFCSGVDGSTGRAGQH
GVGLAFKESIIRGATSTQELTNERLMSMTFNLTGAGARV*
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