mRNA_A-nodosum_M_contig1116.10.3 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1116.10.3
Unique NamemRNA_A-nodosum_M_contig1116.10.3
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A6H5J960_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J960_9PHAE)

HSP 1 Score: 398 bits (1022), Expect = 7.370e-131
Identity = 227/448 (50.67%), Postives = 278/448 (62.05%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWC-PST-IKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGP---WDDLASLAAPDQE---VTVDFTPDGRGDCVVEL-----------------DSRKSKVESGEGLNLKPPGTPVDVD--------TVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKA--------DGTGFELEIEEGSVPWIPL---------------------------------DPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKN-VKMLLHAGGEGTIEEPAQDDEDR 1153
            ME+LFE++Q++ R+ W  PS+ ++RL+ +P  A+FF++YVAT+TPVI+SGG    +  G    WDDLASLA  D E   VTVDFTPDGRGDCV+++                 DS      +G   + K  GT   V+        T  VFVKPEER+M+F +F+  +L          +SST      G  VPYLSHQNDSLRQEFPGLM DVEPFL LAREAFGN+P+AVNLWIGD RS+SAVHKDHYENMYCVV G+K FTLLPPSD+LFLYEQ++PQGRYR+++         G GF           IP+                                 DPACPDLEKYPLFR ASPV C VGPGDILYLP+LWYHRV+Q G+T+AVNYWHDMQFD KYV+YRFLQ L+ K  +  V+     G  G+   P++  E R
Sbjct:    1 MEELFEQLQDDTRSFWQNPSSGVRRLDTMPPPAEFFRDYVATNTPVILSGGGC-FKGGGRRSCWDDLASLAGRDSEGLEVTVDFTPDGRGDCVIDVANSMLSELSTSDANAKRDSAIGGGAAGAEGSRKSCGTGDAVNGGXXXXXGTTAVFVKPEERRMKFEAFISTLLKEAAAKAGDKSSSTRTSGGVGGGVPYLSHQNDSLRQEFPGLMEDVEPFLALAREAFGNEPDAVNLWIGDDRSLSAVHKDHYENMYCVVRGEKHFTLLPPSDVLFLYEQEYPQGRYRQRSVDGGEGEGRGGGFXXXXXXXXXXXIPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPACPDLEKYPLFRFASPVHCRVGPGDILYLPSLWYHRVSQRGITVAVNYWHDMQFDHKYVHYRFLQTLAAKLREGGVRRPGGVGFGGSSGRPSESPEAR 447          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A6G0XCV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCV2_9STRA)

HSP 1 Score: 299 bits (765), Expect = 4.250e-94
Identity = 157/361 (43.49%), Postives = 208/361 (57.62%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGT------------GFELEIEEG---SVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSR 1069
            M  +  ++ E+++  W P TI R++  PS  +F+++YV+ + PV+I+           W DD       D +VTVD TP G GD VV+LD +                         VFV PEER M F  FV ++     +G                 VPYLSHQNDSLR++FP LM DV+P ++ A EAFGN PEAVNLWIGD+R+VS +HKDHYENMYCVV G+K FTLLPPSD+ FLYE ++P GRY  K   T             + +E++E    + PWIP+DP  PD  KYPL +H   +   +  G+ LYLP+LWYHR  Q   T++VNYWHDM+FD KY YY F+ G++R
Sbjct:    1 MNQVLAQLSEDSKDFWTPRTIARISR-PSPLEFYRDYVSKNIPVVITDAFDHWPALHKWTDDYLVETLGDHQVTVDVTPFGYGDAVVDLDDKS------------------------VFVMPEERNMTFRDFVQILHDSQFDG-----------------VPYLSHQNDSLREQFPALMQDVDPMVDFAAEAFGNGPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYETEYPTGRYVHKNTITPRDFNRPCCGHPSWSIEMKEDETETTPWIPVDPLNPDTTKYPLAKHVVHLEVTLEVGETLYLPSLWYHRATQLCETVSVNYWHDMEFDAKYAYYNFVHGVAR 319          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: W4GTP9_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTP9_9STRA)

HSP 1 Score: 288 bits (736), Expect = 1.060e-89
Identity = 151/363 (41.60%), Postives = 207/363 (57.02%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGT----------------GFELEIEEGS--VPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
            ME +FE++ E+++  W P +I R+   P+  +F++ YV+ + PVII+    +      W ++    A  + +VTVD TP G GD V                          V T  VFV PEER M F  F+ ++     +G                 VPYLSHQNDSLR +FP L+ DV+P L  A EAFGN PEAVNLWIGD+R+VS +HKDHYENMYCVV G+K F+LLPPSD+ FLYE ++P GRYR   + T                 + + +++ +   PWIP++P  P +EKYPL +H  P+   +  G+ LYLP+LWYHR  Q   T+AVNYWHDM+FD KY Y+ F+ G++
Sbjct:    1 MEQVFEQLSEDSKDFWTPRSIARIPQ-PTPLEFYRNYVSKNIPVIITNAMDSWPAMAKWTNEYLVDALGETQVTVDVTPFGYGDAVT------------------------TVGTENVFVMPEERSMAFRDFLAILHDPCFDG-----------------VPYLSHQNDSLRDQFPALVDDVDPMLAFASEAFGNTPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFSLLPPSDVAFLYETEYPTGRYRSTRETTIHDETPTILHQCRSHPSWSIAMQDNNDLTPWIPVNPLHPQVEKYPLTKHLQPLVVTLEAGETLYLPSLWYHRATQLTETVAVNYWHDMEFDAKYAYFNFVHGVA 321          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A836CM99_9STRA (Cupin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM99_9STRA)

HSP 1 Score: 290 bits (742), Expect = 1.560e-89
Identity = 163/382 (42.67%), Postives = 216/382 (56.54%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPWDDLASLA-APDQEVTVDFTPDGRGDCVVELDS---------------RKSKVE------------------SGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRING----EEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFELEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
            M+ L  E+Q+N  +LW P  ++R++  P++ +F+++YVAT+TPVII G       A  W D A +  A +  VTVD TP G GDC  E D                R   VE                  S  GL L P        TV   +  + R   F      + P     +   T    K   +     + VPYLSHQN SL +EF  L   V   L LAR+ F N+PEAVNLW+GD R+VSA HKDH+EN+YCV+ G+K FTLLPP+DILFLY++     RY        +++++E+  VPWI  DPA P+  ++PL R+ASPV C VGPG+ LYLPA+WYHRVAQ+G+T+AVNYWHDM FD K+VY+ FL GL+
Sbjct:    1 MQSLLAELQDNCSSLWAPRHVQRIDP-PTAEEFYRQYVATNTPVIIRGLLGKWADAAHWSDAALMEKAGELTVTVDVTPGGHGDCCAEADGEELCRVPYLSVNDRQRCCSVERLPAAVHDRGLGXXXXXXSQSGLGLHP--------TVVRVLSCDTRNFNFTIGAKTIAPEAHVYKPPRTLHPKKHNCSRAFSFDGVPYLSHQNSSLTREFAPLAQRVPSCLPLARDTFRNEPEAVNLWVGDGRAVSACHKDHFENLYCVLRGEKRFTLLPPTDILFLYQRQCRAARYAHTP--RSWKVQLEDERVPWISADPAEPNFNRFPLLRYASPVQCAVGPGETLYLPAMWYHRVAQKGVTVAVNYWHDMAFDHKFVYHNFLVGLA 371          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A024UD90_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD90_9STRA)

HSP 1 Score: 287 bits (734), Expect = 1.980e-89
Identity = 146/365 (40.00%), Postives = 206/365 (56.44%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFELEIEEGSV--------------------PWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
            M+D+  ++ E+ +  W P +I R+   P+  +F++ YV+ + PVII+           W D+  +    D +VTVD TP G GD V  +D+                         +VF  PEER M F +F +++     +G                 VPYLSHQNDSLR +FP L+ DV+P L+ A EAFGN PEAVNLWIGD R++S +HKDHYENMYCVV G+K FTLLPPSD+ FLYE++FP GRYR  +  T  +  ++  S+                    PWIP+DP  P ++++PL +H  P+   +  G+ LYLP+LWYHR  Q   T++VNYWHDM+FD K+ Y+ F+ G++
Sbjct:    1 MDDVLAQLGEDTKDFWAPRSIARIPP-PTPMEFYRHYVSKNIPVIITHAVDHWPALTKWTDEYLTDTLGDAQVTVDVTPSGYGDAVTSVDTH-----------------------TKVFAMPEERSMSFRTFFEILRDPTFDG-----------------VPYLSHQNDSLRDQFPDLLEDVDPMLDFAAEAFGNSPEAVNLWIGDARAISTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYEREFPTGRYRHTSS-TSTKSSVDSASIQYPCTNHPSWSIVMKDDEMTPWIPVDPLDPQVDEFPLAKHIQPLHVTIEAGETLYLPSLWYHRATQLTETVSVNYWHDMEFDAKFAYFNFVHGVA 323          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A485KNB8_9STRA (Aste57867_9582 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNB8_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.910e-88
Identity = 157/357 (43.98%), Postives = 203/357 (56.86%), Query Frame = 2
Query:   47 FEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPWDD---LASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFE--------------LEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLS 1066
             E++ E+++  W P TI+R++  PS  +F++ YV+ + PVII+  A        W D   + SL +  ++VTVD TP G GD V  +  R                        EVFV PEER M F  F+D++     +G                 +PYLSHQNDSLR +FP LM DV+  +  A EAFGNDPEAVNLWIGD+R+VS +HKDHYENMY VV G+K FTLLPPSD+ FLYE +FP GRY   A     E              ++  E   PWIP+DP  PD   YPL +H  P+   V  G+ LYLP+LWYHR  Q   T++VNYWHDM+FD KYVYY F+ G++
Sbjct:   12 LEQLGEDSKDFWTPRTIERISA-PSPLEFYRNYVSKNIPVIITDAADHWPAMHKWTDAFLVESLGS--KQVTVDVTPSGYGDAVHHVQGR------------------------EVFVMPEERDMTFKEFLDILHDPAFDG-----------------IPYLSHQNDSLRVQFPELMPDVDATIAFAAEAFGNDPEAVNLWIGDERAVSTMHKDHYENMYTVVRGRKHFTLLPPSDVAFLYETEFPTGRYVHVASKDTSETLVPSEGHPNWSIRMQEPEDMTPWIPVDPLNPDTTAYPLTKHLVPLEVTVETGETLYLPSLWYHRATQHCETVSVNYWHDMEFDAKYVYYNFVHGVA 324          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: K3WFY4_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFY4_GLOUD)

HSP 1 Score: 283 bits (724), Expect = 2.610e-87
Identity = 161/404 (39.85%), Postives = 218/404 (53.96%), Query Frame = 2
Query:   32 DMEDLFEEMQENARALWCP-STIKRLNGIPSSA-QFFKEYVATSTPVIISGGAATL----RMAGPWDDLASLA--APDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKA----------DGTGFELEIEE---------------------------------GSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKNVK 1090
            D+     +++E+    W P   + R++    SA +F++ +V+ S PV+++   A      ++   W D A L   A D  VTVD TP G GD V++L++ +S  +                 T EVFV PEER+M F+ F+  +   DG                 E VPYLSHQNDSLR EFP L  DV  +LELA++AFGN+P+AVN+WIGD+R+VS +HKDHYENMYCVV GQK FTLLPP+DI  LYE +FP  RYR ++          D     L  +E                                 G  PWIP+DP   D  K+PL +H  P+ C V  G++LYLPA+WYHR  Q   TI+VNYWHDM+FD +YVYY F+  ++ K+ K  +
Sbjct:    8 DVHASITKLREDVADFWAPLHEVARVDASSLSALEFYRRFVSKSVPVVLTNVMANAPDWQQVLQHWHDDAYLVEQAGDDPVTVDVTPFGFGDAVLDLNTDRSDAQK----------------TSEVFVMPEEREMTFSEFLAALNDRDGF----------------EGVPYLSHQNDSLRDEFPMLYQDVPAYLELAKDAFGNEPDAVNIWIGDERAVSTMHKDHYENMYCVVRGQKHFTLLPPADIASLYESEFPSMRYRHQSSKEKAKEDDDDKDAPVLSADEIAANDAEAARLTALFHEKYPQHTSWRIVASPHTGDTPWIPVDPLQIDTTKFPLAQHLKPIECVVNEGEVLYLPAMWYHRATQLCQTISVNYWHDMEFDCRYVYYNFVHDIAAKFAKKAE 379          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A8K1CDY8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDY8_PYTOL)

HSP 1 Score: 277 bits (708), Expect = 2.430e-85
Identity = 154/371 (41.51%), Postives = 209/371 (56.33%), Query Frame = 2
Query:   44 LFEEMQENARALWCP-STIKRLNGIP-SSAQFFKEYVATSTPVIISGGAAT-----LRMAGPWDDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKA---------------------DGTGFELEIEE-GSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSR 1069
            L  E++E+    W P  +I R++    S   F+++YV+ S PVI++    +     +R A   D+     A D E+TVD TP G GD V+ELD                          E+FV PEER+M    F  ++   +G                 + VPYLSHQNDSLR EFP L A V P +EL +EAFGNDP+AVN+WIGD+R+VS +HKDHYENMYCVV G+K FTLLPPSD+  LYE+++P  RYR ++                     D + F +  EE G  PWIP+DP   ++++YPL  H +P+ C V  G+ LYLPA+WYHR  Q   TI+VNYWHDM FD +YVYY ++  +++
Sbjct:    9 LVAELREDVADFWQPLQSIARVDTRSLSPLAFYRQYVSKSVPVILTHAMESEQWQHVRTAWQDDEYLVQQAGDGEITVDITPFGYGDAVLELDREN-----------------------ELFVMPEERRMTLREFFRVLNDREGF----------------DGVPYLSHQNDSLRDEFPRLYAQVPPCIELGKEAFGNDPDAVNIWIGDERAVSTMHKDHYENMYCVVKGRKHFTLLPPSDVACLYEREYPSARYRHESTLGQDAYDEATTAAFHSCHPEDTSWFIVPSEETGMTPWIPVDPLRINIKRYPLADHLNPLQCVVEAGETLYLPAMWYHRATQLCPTISVNYWHDMDFDCRYVYYNYVHRVAK 340          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A1V9ZSZ4_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSZ4_9STRA)

HSP 1 Score: 280 bits (715), Expect = 5.400e-85
Identity = 153/375 (40.80%), Postives = 211/375 (56.27%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFE-----------------LEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKNVKMLLHA 1105
            ME +F ++ E+A+  W P ++ R+   PS   F+++YV+ + PVII+GG         W DD       ++ VTVD TP G GD V+ LD+                       T +VFV+PEER + F  F  L      +G                 +PYLSHQNDSLR +FP L+ DV+  +  A EAFGN PEAVNLWIGD+R+VS +HKDHYENMYCVV G+K FTLLPPSD+ FL+E  +P  RY  ++    F+                 +E  E S PWIP+DP   D  ++P  +H +P+   +  G++LYLP+LWYHR  Q   T+AVNYWHDM+FD KYVY+ F+ G++    K +++  H+
Sbjct:    1 METVFAQLSEDAKDFWAPRSVARIPP-PSPLVFYRDYVSKNIPVIITGGIDHWPAMRKWTDDYLLQTIGNKTVTVDVTPSGYGDAVLALDA-----------------------TTKVFVQPEERDVTFREFHTLYHDAAFDG-----------------IPYLSHQNDSLRDQFPQLVGDVDAAIGFAAEAFGNTPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLHETTYPTTRYVHESRTARFDAAALRPSTHPSWFVHVPVEAAE-STPWIPVDPLNVDAAQFPNAKHIAPLEVVLEAGEMLYLPSLWYHRATQLCDTVAVNYWHDMEFDAKYVYFNFVHGVATA-AKELRLKTHS 332          
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Match: A0A1V9Z6A2_9STRA (JmjC domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6A2_9STRA)

HSP 1 Score: 276 bits (707), Expect = 5.740e-84
Identity = 149/378 (39.42%), Postives = 213/378 (56.35%), Query Frame = 2
Query:   35 MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGAATLRMAGPW-DDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEGLNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSSTSKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVNLWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGRYRRKADGTGFELEI--------------EEG--SVPWIPLDPACPDLEKYPLFRHASPVTCCVGPGDILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKNVKMLLHAGGEG 1117
            M++L  ++ ++A+  W P  I R+   P++ +F+++YV+ + PVII+           W D+    A  ++ VTVD TP G GD V+ L+++K+                      +VFV+PEER M F+ F+++      +G                 VPYLSHQNDSLR++FP L+ DV+  ++ + EAFGN PEAVNLWIGD R+VS +HKDHYENMYCVV G K F LLPPSD+ FL+E ++P  RY  K++   F+                  EG  + PWIP+DP   D +K+P  +H  P+   +  G++LYLP+LWYHR  Q   T++VNYWHDM+FD KYVY+ FL         +V   +H G  G
Sbjct:    1 MDELLNQLSDDAKDFWMPKKISRIPP-PTAVEFYRDYVSKNIPVIITNAINHWPALQKWTDEYFDEAIGNEIVTVDVTPTGYGDAVLTLENKKT----------------------QVFVQPEERNMTFSKFLEIYHDKQFDG-----------------VPYLSHQNDSLREQFPQLVHDVDRVIDFSAEAFGNMPEAVNLWIGDDRAVSTMHKDHYENMYCVVRGLKHFILLPPSDVAFLHETEYPTTRYVHKSNVDQFDPSTLIQSKNPNWFIHMPPEGRETTPWIPVDPVAIDTDKFPKAKHIQPLEVVLEEGEMLYLPSLWYHRATQLCDTVSVNYWHDMEFDAKYVYFNFL---------HVTTTVHGGHNG 329          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1116.10.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J960_9PHAE7.370e-13150.67JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6G0XCV2_9STRA4.250e-9443.49JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
W4GTP9_9STRA1.060e-8941.60JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A836CM99_9STRA1.560e-8942.67Cupin-like domain-containing protein n=1 Tax=Tribo... [more]
A0A024UD90_9STRA1.980e-8940.00JmjC domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A485KNB8_9STRA1.910e-8843.98Aste57867_9582 protein n=1 Tax=Aphanomyces stellat... [more]
K3WFY4_GLOUD2.610e-8739.85JmjC domain-containing protein n=1 Tax=Globisporan... [more]
A0A8K1CDY8_PYTOL2.430e-8541.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZSZ4_9STRA5.400e-8540.80JmjC domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A1V9Z6A2_9STRA5.740e-8439.42JmjC domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1116contigA-nodosum_M_contig1116:133889..139023 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHJ9
Preferred nameJMJD7
PFAMsC2,Cupin_8,PLA2_B
Model size1598
Max annot lvl2759|Eukaryota
KEGG rclassRC00037,RC00094
KEGG koko:K16342,ko:K19219,ko:K20989
KEGG TC2.A.21.6
KEGG ReactionR01315,R01317,R02053,R07064,R07379,R07387,R07859
KEGG Pathwayko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,ko04010,ko04014,ko04072,ko04217,ko04270,ko04370,ko04611,ko04664,ko04724,ko04726,ko04730,ko04750,ko04912,ko04913,ko04921,ko05231,map00564,map00565,map00590,map00591,map00592,map01100,map01110,map04010,map04014,map04072,map04217,map04270,map04370,map04611,map04664,map04724,map04726,map04730,map04750,map04912,map04913,map04921,map05231
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons5
Evalue6.99e-152
EggNOG OGsCOG1226@1|root,KOG2508@2759|Eukaryota
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-10_002180.1
EC3.1.1.4
DescriptionCupin-like domain
Cds size1125
COG categoryP
BRITEko00000,ko00001,ko01000,ko02000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1116.10.3prot_A-nodosum_M_contig1116.10.3Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1116 134328..138989 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866512.051274-UTR-A-nodosum_M_contig1116:133888..1343271680866512.051274-UTR-A-nodosum_M_contig1116:133888..134327Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1116 133889..134327 -
1680866512.112961-UTR-A-nodosum_M_contig1116:138989..1390231680866512.112961-UTR-A-nodosum_M_contig1116:138989..139023Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1116 138990..139023 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866512.0630746-CDS-A-nodosum_M_contig1116:134327..1345521680866512.0630746-CDS-A-nodosum_M_contig1116:134327..134552Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 134328..134552 -
1680866512.0735104-CDS-A-nodosum_M_contig1116:137011..1370881680866512.0735104-CDS-A-nodosum_M_contig1116:137011..137088Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 137012..137088 -
1680866512.081522-CDS-A-nodosum_M_contig1116:137540..1377091680866512.081522-CDS-A-nodosum_M_contig1116:137540..137709Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 137541..137709 -
1680866512.0894346-CDS-A-nodosum_M_contig1116:138113..1382691680866512.0894346-CDS-A-nodosum_M_contig1116:138113..138269Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 138114..138269 -
1680866512.1003654-CDS-A-nodosum_M_contig1116:138491..1389891680866512.1003654-CDS-A-nodosum_M_contig1116:138491..138989Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1116 138492..138989 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1116.10.3

>prot_A-nodosum_M_contig1116.10.3 ID=prot_A-nodosum_M_contig1116.10.3|Name=mRNA_A-nodosum_M_contig1116.10.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=375bp
MEDLFEEMQENARALWCPSTIKRLNGIPSSAQFFKEYVATSTPVIISGGA
ATLRMAGPWDDLASLAAPDQEVTVDFTPDGRGDCVVELDSRKSKVESGEG
LNLKPPGTPVDVDTVEVFVKPEERKMRFNSFVDLMLPIDGNGENSITSST
SKGRINGEEVPYLSHQNDSLRQEFPGLMADVEPFLELAREAFGNDPEAVN
LWIGDQRSVSAVHKDHYENMYCVVTGQKIFTLLPPSDILFLYEQDFPQGR
YRRKADGTGFELEIEEGSVPWIPLDPACPDLEKYPLFRHASPVTCCVGPG
DILYLPALWYHRVAQEGLTIAVNYWHDMQFDFKYVYYRFLQGLSRKYFKN
VKMLLHAGGEGTIEEPAQDDEDRG*
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mRNA from alignment at A-nodosum_M_contig1116:133889..139023-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1116.10.3 ID=mRNA_A-nodosum_M_contig1116.10.3|Name=mRNA_A-nodosum_M_contig1116.10.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5135bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:133889..139023- (Ascophyllum nodosum dioecious)
TCATTCCCATTGCAACCATCTCCCTCTATGAGACATGGAGGATCTATTCG AGGAGATGCAAGAGAATGCAAGAGCACTTTGGTGTCCTTCGACGATTAAA AGACTGAACGGGATCCCCTCATCGGCTCAATTTTTCAAAGAATACGTCGC GACGAGCACCCCAGTGATAATATCCGGCGGAGCTGCGACCCTGCGGATGG CAGGGCCATGGGATGACCTGGCCTCCTTGGCAGCACCAGACCAGGAAGTC ACGGTAGACTTCACTCCGGATGGGCGTGGAGATTGCGTGGTAGAGTTGGA CTCGAGAAAAAGTAAGGTTGAAAGTGGCGAAGGGCTTAACCTGAAGCCCC CAGGTACTCCTGTTGACGTCGACACAGTAGAGGTGTTCGTAAAGCCGGAG GAACGAAAGATGAGGTTCAACAGCTTCGTGGACCTCATGCTCCCGATTGA TGGTAATGGTGAAAATTCCATTACATCCAGTACAAGCAAAGGCAGGATCA ATGGAGAAGAAGTTCCATACTTGTCACACCAGGTGGGACGACGGATTATC CCACCACCAAGCGAGGTTGGCAAACGTCGGCTGATGTCCCCCTCGTACTT GTAGATGGTATTGACGTTTGAAGACTGAAACGCGGTCGCCTACGATCGTT GTCACTGGCAACTCATCCGGGTTAGGACGCTCAGGGGGAACTCTCTCGCC TTCCCTCGATTCCCTTACTACTTTTCCGAACGAACCCGAAACGTTGGATG GAAGAATGATAGCCTCAGACAAGAATTTCCGGGCCTGATGGCGGACGTTG AGCCATTTCTGGAGTTGGCGAGAGAGGCCTTCGGAAACGATCCAGAGGCC GTTAACCTGTGGATTGGCGACCAACGTTCCGTTTCGGCTGTGCACAAGGA TCACTACGAGGTTCGTAATACCGTCGTGGAACTGAAATGGTTTCATGATT GTCGCGGCGATACTAAGCACGGTATGCTCATAAGCTATGCACTCTGCGCT CTGAGAAATCTATGTACCGATAAGATTTCCCTCTTCCTAGAATTTGTTAA TCTCTCGGATCCTGCGAATGGGATGCTCTCCCTAGCTCCTTGTATCGCCT TCTTTTAAAGAAAAATCAGACCACACCTAGACCTTCTGAGCATCCCCCGG TTATGGGGGATTGTTCTGCTTAGTTACGATGTGGAGTAGACTGATGAAAT GTTGGATGTCCGGCGTGGATTGCCCCGGTGGTATAGAACAAATCTCACCA GCGGTTCCCACCCTGGCGGTTCTGCTATCCCCACCCTGGCGACCGGCTCC CGTCCCTGTGGCAGAACATGTATTGCGTGGTTACGGGGCAGAAGATTTTC ACCCTCTTGCCGCCATCTGATATCTTGTTTCTCTACGAACAAGATTTTCC CCAAGGGAGGTACCGACGGAAAGCTGATGGTACGGGCTTCGAGTTGGAGA TTGAGGAGGGTTCGGTGCCATGGATTCCGCTAGGTGATGGACGTATTATA GCTCACGTGCCCATGGCAGTGTCCCATGAACGTCACATAATTTCACGGGG TGTTTGTCGCTCGACAACGGTAGAGGGCTACGGTTGAACATGGGAAAGTA GACTACAGTCCGTAGTATTAATATTATAGGCTCTAGTACAGTAGATCGAA TTCAATGTGAAATCCGGACTTGGCTGATGGCAACCTCCGGACGGCAGTCC TTGGCGATCAAGTGTTCTCACTCTTGCGATGAACAACATTCAATGTGTTA GATGACGCAGTTTCCCATTGTTGTCCCTGCGCCCCGCGTGAAACGAAATA CAGACCGTACAGTAATCACATCACGGCCAATACGAGAGTTGCGATGTGAT GGTGTTGAGCGATCACTTCTTCCTTTCTGCCTCTTACCTCCTCCCCTCTC GTGCTGTACTGTTCTCGTTGTTTCTCTTAGTGTAGATCCTGCCTGTCCCG ACTTGGAGAAGTACCCCCTGTTCCGCCATGCATCACCGGTTACTTGCTGC GTTGGGCCGGGGGTGAGGATAAGGATCTTCGTCGTCCCCACTCTTATTTT GTGTTTCCATCGGAAAATACGCGCTTTTAGCACTTGCTCCACCTTTGGCA CTGGATCAGTGACCCTCCTCACAATAAGACGGCAGTTATTGTAGAGAGTC TGAGGATTTACCTGCAAGACATGTCTCGATTTCGTGATTCCAGACATTTA TATTCTAATGCATACCTCACATCATTTTATGGGTGTCTTAAAAGTCCACT GGTTTTTAAGCCCACAAATACTTTAGTATTTTTAGTCCACTAAAATATTA CTACAGTAGGTTAAAGAAAAATCTGAACGCGCATCTAGACCTTCTGAGCA TCCCCCAGTCAGGGGGAAAAATGTCAAGACGTTTAGGTGGGATCATAGGC TGCAAAGACAAAACCTCTTCATGGCCTCTAAACGGGTTCCCCGATGATGG TAGTAACATTGGGTCAGCAGTATAATGTCGGGGAGAAACCCACCGTTATA CTGTACACTTACATTAATCGCCATGCAGGAACATCAAACAAAAACGAAAC AAGAACATTATAGTGTGTGTGTGTGTTGTGTTTTCTTCCCATTCATTCTG GACATCAAGTTCGTTGGACGTACCAGCCGGGGTCACACAGGAGGAAGGTC ACACAGAATTTCTCATCCACCTTCTTTCTGCGGTGCGTGCCTTAATTTTT CTCGCGAGAAGAATTCAGCCATTCCTTTACCTCGTCGACCGTGAAGTCGA ATTTTGTGTACTAACGGTTTAATCGTTCTCCACCCGTTGGGCATTTTTAT TTTTGTTTTTTAGTTTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAA CTCACGTCCCAACGTGTCAGAGGGTTACGAGGTACCTCTGAGCTACCGGG GCACACAATTAAATAGGTTAATACCGTAAGTATCGGAGTCTTGGCACACC CCCTAGACTAACTTCCCAGGCTTGATTGCTCCACAACCAAGAGGATGTAA ACACCGACCGATACATTTAAAGAAAGCTCTCGACGAGATCTTTCGAAAAC CGCCCTTTTCGGCATTGGCACCCTCTTGGTTGTGGAGCAATCGAGCCTGG AAAGTCAGTCTAGGGTGTGTGCCAAGACTCTGATATTTACGGATAATAAT GCCGCAAGAGTCCCCCCGCTTTCAATCAAGGCTTTATTTATGTATATGTC GTAAGAAGAGGTTGGATATCAGGGGACCGGTGTTAGTTTATTTTCTCCTG ATGATGAATACAGTATATTTTGGGTGATTAAAAAACTCAAGGGTGGAAAA AACAAGTTGGCGATGAGCATCCTCGTCGGGATCCAGTCCTTGTTTCCACT CTCGTGGCTCTCACGTTATACGAAGTCTTTTTTGTTTGTAGAAAAATCTG AACGCATCTAAACCTTAACCTTAACCTTATTCTGAGAATTCACACCGTCC GGGTAATTTTGTTTTTAAACGTTTAACGTTTGGTTGGGAACAATGGGTGT AAGAACAAAACTCGCACATGGGGTTTAGTCAGGTTCCCCAATGGATTTGC AATCAATAGTTTAATATGGTGGAGAAACCCACCGTTATACGGTACACGTA CACTAATCATCATGTAGGTACACACCAAAACTGAAGGTAAAAAGAACACG CTGATCCAGCCCTGTTGTAGTAAAATGTTTTTTTTTTTCTGTACACTTAC ATTAATCATGTAGGTACAAATAAATAAATGGACGCCACCGCGGAACTCGG GAGGAATCCCGCAAGTAAGCACCATATTCAGCCTTAGTATAGAGATGAGC AGGCTGACGCGGGACGGGACTGCCGAACCCGTCTCGCAAAACCAAATTCT CAGGCGCGAACGCGGACAGGGAAATATTTATTTCCCTGCTCAGCTGACCG CGTGCAGGGTTGGCAACCTTACCCGGTTGATCCATATTCTTGCTATATCT GTGACCATACATACATAGCTCTACACCAAAACTGAAGGTAGGGGCACGCT CATCAGCCATATTGTAATAAAATGTACAAATATTTATGAGCATTTATGTT GGGTCTGGATCTGTGAGGACAAAATATTTTGGTGAAGCGAAGTATTGGTG AACGATTGTTGAACTATTCTAGGTACAGCACTATTGTTTAAGAAGACACT TGCCTTATTTATAACGATCGATAGGGGTTTTTCAGTTTACAGGTTGTAAG AGTCTATCGCGATATTTCCAGTATCTAGGGGGACGCACCCAGATCTACAG TATACATAAATCAATCGGCATGTCTTTGGCAAACATACATTAAACAGTCG TAAAAGTAAACATATTGACATGTCGGTCAAGTGAGGGATTGATTAACCTA GAAGAGTGGTCATTGGCAGACAACACTTCGTCAGTCCCATCAGTCTTTTC AAAAGGCATGCACATTGATTTGCGATCAAGTGCAAGATGTTGCCTTGACT TCTTCGTTCCTTTTTTGGCAGGATATTCTGTACCTGCCCGCCCTGTGGTA TCATCGCGTCGCTCAGGAAGGCTTGACAATCGCCGTGAACTACTGGCACG ACATGCAGTTCGACTTCAAGTACGTCTACTACCGATTTCTTCAGGGCTTG TCAAGAAAATACTTCAAGAACGTAAAGATGTTGCTGCATGCTGGCGGAGA GGGAACGATAGAAGAACCAGCGCAAGATGATGAAGACCGAGGTTGAACGA TAACGGAGAGATCTATTCATGAGTCCACATTTTTCCTTTCACGAACGTAT CAAGATGAGGCGCGAGCGGGACTTTGTTGCTTTTTGTTGTTGGTTTTTTG GTTCTCAATACAGGTTTCTAATTGGTAGCCGAGCTGTAATATTAGTTTGT GTGGTATTCGTATTAATCGGTGTCTACGAGGTAGCCAATCGTCCCGGGTC TCACCTCGGATGCATGAGTATGCAGTATCAACCCATTGATTTTTTTGTGT TTGCTAAGCTCTTCATAATATCACAAGAGCATGTGGATCCACAAAAAGAT AATATGTGGTACCTGGTATGTGATGGTTCAGAGCGCAGTGTTCAAATGAA ATCGAGTCGAGAAATCCAGGTCCATTGTCACTTCTATAAAACAGCTGCAA GCGCAGTATTATACTATGAATACTGTAGTACCAGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1116:133889..139023-

>mRNA_A-nodosum_M_contig1116.10.3 ID=mRNA_A-nodosum_M_contig1116.10.3|Name=mRNA_A-nodosum_M_contig1116.10.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=1125bp|location=Sequence derived from alignment at A-nodosum_M_contig1116:133889..139023- (Ascophyllum nodosum dioecious)
ATGGAGGATCTATTCGAGGAGATGCAAGAGAATGCAAGAGCACTTTGGTG
TCCTTCGACGATTAAAAGACTGAACGGGATCCCCTCATCGGCTCAATTTT
TCAAAGAATACGTCGCGACGAGCACCCCAGTGATAATATCCGGCGGAGCT
GCGACCCTGCGGATGGCAGGGCCATGGGATGACCTGGCCTCCTTGGCAGC
ACCAGACCAGGAAGTCACGGTAGACTTCACTCCGGATGGGCGTGGAGATT
GCGTGGTAGAGTTGGACTCGAGAAAAAGTAAGGTTGAAAGTGGCGAAGGG
CTTAACCTGAAGCCCCCAGGTACTCCTGTTGACGTCGACACAGTAGAGGT
GTTCGTAAAGCCGGAGGAACGAAAGATGAGGTTCAACAGCTTCGTGGACC
TCATGCTCCCGATTGATGGTAATGGTGAAAATTCCATTACATCCAGTACA
AGCAAAGGCAGGATCAATGGAGAAGAAGTTCCATACTTGTCACACCAGAA
TGATAGCCTCAGACAAGAATTTCCGGGCCTGATGGCGGACGTTGAGCCAT
TTCTGGAGTTGGCGAGAGAGGCCTTCGGAAACGATCCAGAGGCCGTTAAC
CTGTGGATTGGCGACCAACGTTCCGTTTCGGCTGTGCACAAGGATCACTA
CGAGAACATGTATTGCGTGGTTACGGGGCAGAAGATTTTCACCCTCTTGC
CGCCATCTGATATCTTGTTTCTCTACGAACAAGATTTTCCCCAAGGGAGG
TACCGACGGAAAGCTGATGGTACGGGCTTCGAGTTGGAGATTGAGGAGGG
TTCGGTGCCATGGATTCCGCTAGATCCTGCCTGTCCCGACTTGGAGAAGT
ACCCCCTGTTCCGCCATGCATCACCGGTTACTTGCTGCGTTGGGCCGGGG
GATATTCTGTACCTGCCCGCCCTGTGGTATCATCGCGTCGCTCAGGAAGG
CTTGACAATCGCCGTGAACTACTGGCACGACATGCAGTTCGACTTCAAGT
ACGTCTACTACCGATTTCTTCAGGGCTTGTCAAGAAAATACTTCAAGAAC
GTAAAGATGTTGCTGCATGCTGGCGGAGAGGGAACGATAGAAGAACCAGC
GCAAGATGATGAAGACCGAGGTTGA
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