prot_A-nodosum_M_contig1111.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1111.4.1
Unique Nameprot_A-nodosum_M_contig1111.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length178
Homology
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BLAST of mRNA_A-nodosum_M_contig1111.4.1 vs. uniprot
Match: A0A3B1E2Q6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1E2Q6_9ZZZZ)

HSP 1 Score: 49.7 bits (117), Expect = 3.340e-5
Identity = 26/46 (56.52%), Postives = 30/46 (65.22%), Query Frame = 0 
Query:    8 YADAEPLYARKQAILEKALGHDHRDVAATLDTRAFCLKKQGRDAEA 53
            YA AEPLY R  AILEKALG +H +VA TL+  A   +   RD EA
Sbjct:    1 YAQAEPLYTRALAILEKALGLNHPNVATTLENMAVLFRATDRDDEA 46
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1111.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3B1E2Q6_9ZZZZ3.340e-556.52Uncharacterized protein (Fragment) n=1 Tax=hydroth... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 32..105
e-value: 1.1E-12
score: 48.0
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 5..100
coord: 71..161
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 5..100
coord: 71..161
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..176
e-value: 1.4E-38
score: 134.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 29..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1111contigA-nodosum_M_contig1111:134550..136864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1111.4.1mRNA_A-nodosum_M_contig1111.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1111 134437..136864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1111.4.1 ID=prot_A-nodosum_M_contig1111.4.1|Name=mRNA_A-nodosum_M_contig1111.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=178bp
MTLSQREYADAEPLYARKQAILEKALGHDHRDVAATLDTRAFCLKKQGRD
AEAVVLHDKAVRILEDTLGSEHPDVVKSLHSLATTLKTLDKLPEAHAVFE
RITAILVKTHGTEHLRVADYLSIRARLLVKLGKQGDAVPLLERALSITTK
KIGEHHKNTVKIRDFLQTIREDTQGES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf