mRNA_A-nodosum_M_contig100.9.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig100.9.1
Unique NamemRNA_A-nodosum_M_contig100.9.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.210e-52
Identity = 111/252 (44.05%), Postives = 151/252 (59.92%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR+G+ +I     GYV+  SG   G   + G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + DHL+++MDANARTG R   GG  D +V G YG+D +N+NG RL   A++ + S+ N +F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++R   R APNR
Sbjct:   12 CDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRR--GGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5K259_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K259_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 5.460e-51
Identity = 109/252 (43.25%), Postives = 150/252 (59.52%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR+G+ ++     GYV+  SG   G   + G+ GVG+A++E++  ++G  G   E I+ RL+KVR+        TF+VGYAPTET  T        K  FW  L   + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A+  +LS+ N +F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++R   R APNR
Sbjct:   12 CDVIGLQETRREGQGSLAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEKGRTVECINPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDGEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASGNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 3.990e-50
Identity = 110/252 (43.65%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR G+ +I     GYV+  SG   G   + G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A++ +LS+ N +F TPK GG    F     K   ++RLD+I +RQ DRR VRN++V       SDH+LV  ++R   R APNR
Sbjct:  209 CDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRKG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFIFMRQADRRFVRNVSVKRVDFKDSDHKLVLTTVRLPPRVAPNR 454          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 6.610e-50
Identity = 114/256 (44.53%), Postives = 152/256 (59.38%), Query Frame = 1
Query:   10 AKYECDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            A  +CD I LQETRR G+  I     GYV+  SG   G   + G+ GVG+A++E++  ++G  G   E IS RL+KVR+        TF+VGYAPTETA          K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  AA+ +LS++N +F TPK G      +    KE HR  LD+IL+RQ DRRLVRN +V       SDH LV  ++R   R APNR
Sbjct:    8 AATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNR 257          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 6.910e-50
Identity = 114/256 (44.53%), Postives = 152/256 (59.38%), Query Frame = 1
Query:   10 AKYECDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            A  +CD I LQETRR G+  I     GYV+  SG   G   + G+ GVG+A++E++  ++G  G   E IS RL+KVR+        TF+VGYAPTETA          K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  AA+ +LS++N +F TPK G      +    KE HR  LD+IL+RQ DRRLVRN +V       SDH LV  ++R   R APNR
Sbjct:  120 AATDCDVIGLQETRRAGQGAITHD--GYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHR--LDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNR 369          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 7.050e-50
Identity = 111/252 (44.05%), Postives = 153/252 (60.71%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR+G+ +I     GYV+  SG   G   + G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+VGYAPTET  T        K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A++ +LS+ N +F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++R   R APNR
Sbjct:   12 CDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 7.630e-50
Identity = 107/252 (42.46%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD   LQETRR+G+ +I     GYV+  SG   G   + G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF++GYAPTET  T        K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A++ +LS+ N +F TPK G      +    KE  ++RLD+IL+RQ DRR VR+++V       SDH LV  ++R   R APNR
Sbjct:   12 CDVTGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKE--KYRLDFILMRQTDRRFVRDVSVKRVDFKDSDHNLVLTTVRLPPRVAPNR 257          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5KV75_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV75_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.330e-49
Identity = 108/252 (42.86%), Postives = 149/252 (59.13%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR G+ +I     GYV+  SG   G   + G+ GVG+ ++E++  ++G +G   E I  RL+KVR+         F+VGYAPTET  T        K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A++ +LS+ N +F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++R   R APNR
Sbjct:  115 CDVIGLQETRRAGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIVIKEAMWESVGEEGRTVECICPRLMKVRLQIGRTCGVAFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNR 360          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.400e-48
Identity = 110/252 (43.65%), Postives = 152/252 (60.32%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAATYH------KSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR+G+ +I     GYV+  SG   G   + G+ GVG+A++E++  ++G +G   E IS RL+KVR+        TF+V YAPTET  T        K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A++ +LS+ N +F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++R   R APNR
Sbjct:  691 CDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQSSN-KGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNR 936          
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 3.400e-48
Identity = 110/252 (43.65%), Postives = 150/252 (59.52%), Query Frame = 1
Query:   22 CDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILGVGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTETAA------TYHKSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVRVFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGPKESHRWRLDYILVRQHDRRLVRNITVHPK--MKSDHRLVSASIRQLGRNAPNR 753
            CD I LQETRR+G+ +I     GYV+  SG   G   + G  GVG+A++E++   +G +G   E IS RL+KVR+        TF+VGYAPTET           K  FW  L + + EV + DHL+++MDANARTG R +G    D ++ G YG+D +N+NG RLL  A++ +LS+ N +F TPK GG    F     K   ++RLD+IL+RQ DRR VRN++V       SDH LV  ++R   R APNR
Sbjct:  189 CDVIGLQETRREGQGSIAHD--GYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG--CCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPK-GGVQHTFQCSN-KGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLRPRVAPNR 434          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig100.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE1.210e-5244.05Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K259_9PHAE5.460e-5143.25Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K3Q1_9PHAE3.990e-5043.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KC90_9PHAE6.610e-5044.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE6.910e-5044.53Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L7A7_9PHAE7.050e-5044.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSV0_9PHAE7.630e-5042.46Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KV75_9PHAE2.330e-4942.86Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5K1H7_9PHAE1.400e-4843.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVN7_9PHAE3.400e-4843.65Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig100contigA-nodosum_M_contig100:141711..142463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog6412.HelroP161862
PFAMsExo_endo_phos,Exo_endo_phos_2
Model size753
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.26e-25
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39VM0@33154|Opisthokonta,3BPUP@33208|Metazoa,3D6HY@33213|Bilateria
DescriptionEndonuclease/Exonuclease/phosphatase family
Cds size753
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866355.2399344-CDS-A-nodosum_M_contig100:141710..1424631680866355.2399344-CDS-A-nodosum_M_contig100:141710..142463Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig100 141711..142463 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig100.9.1prot_A-nodosum_M_contig100.9.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig100 141711..142463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig100.9.1

>prot_A-nodosum_M_contig100.9.1 ID=prot_A-nodosum_M_contig100.9.1|Name=mRNA_A-nodosum_M_contig100.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=251bp
MFAAKYECDFIALQETRRDGRTTIQAPAAGYVVHCSGHCDGDGGEPGILG
VGLAVRESIVRALGPDGIVPEHISARLLKVRVIFKHRTATTFIVGYAPTE
TAATYHKSKFWKELRSTVAEVPASDHLILMMDANARTGGRGEGGGLGDVR
VFGPYGKDTLNDNGSRLLACAAECKLSIVNIFFSTPKRGGNSDAFTYEGP
KESHRWRLDYILVRQHDRRLVRNITVHPKMKSDHRLVSASIRQLGRNAPN
R
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mRNA from alignment at A-nodosum_M_contig100:141711..142463-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig100.9.1 ID=mRNA_A-nodosum_M_contig100.9.1|Name=mRNA_A-nodosum_M_contig100.9.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=753bp|location=Sequence derived from alignment at A-nodosum_M_contig100:141711..142463- (Ascophyllum nodosum dioecious)
ATGTTCGCTGCGAAGTACGAGTGCGACTTCATCGCCTTACAGGAGACTCG CCGCGATGGAAGGACAACCATCCAAGCACCAGCCGCTGGTTATGTCGTGC ACTGCAGCGGCCATTGCGATGGTGATGGAGGTGAGCCCGGGATACTCGGA GTTGGTCTGGCTGTCAGAGAGTCTATCGTTCGCGCACTCGGCCCAGATGG CATTGTGCCGGAACACATCAGTGCGCGGCTGCTGAAGGTGAGGGTGATCT TCAAACACAGAACCGCCACAACCTTCATCGTTGGATACGCTCCGACTGAA ACAGCAGCCACCTATCACAAGTCTAAGTTCTGGAAGGAACTTCGCAGCAC TGTTGCTGAGGTGCCTGCCAGCGACCACTTGATTCTGATGATGGATGCTA ACGCCCGTACTGGAGGAAGGGGAGAGGGAGGTGGACTAGGGGATGTCCGG GTTTTTGGACCATACGGCAAAGACACTCTCAATGACAACGGGTCTCGACT TCTAGCATGTGCTGCCGAGTGCAAGCTGTCGATTGTCAACATATTTTTCA GCACGCCGAAGCGTGGGGGAAACTCGGATGCGTTCACATACGAGGGGCCG AAGGAATCCCACCGCTGGCGCCTGGACTACATCCTGGTACGCCAGCATGA CCGCAGGCTCGTCCGGAATATCACTGTCCACCCGAAGATGAAATCAGACC ACCGCCTGGTTTCAGCTTCCATCCGCCAACTAGGACGGAACGCACCCAAC CGC
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Coding sequence (CDS) from alignment at A-nodosum_M_contig100:141711..142463-

>mRNA_A-nodosum_M_contig100.9.1 ID=mRNA_A-nodosum_M_contig100.9.1|Name=mRNA_A-nodosum_M_contig100.9.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=753bp|location=Sequence derived from alignment at A-nodosum_M_contig100:141711..142463- (Ascophyllum nodosum dioecious)
ATGTTCGCTGCGAAGTACGAGTGCGACTTCATCGCCTTACAGGAGACTCG
CCGCGATGGAAGGACAACCATCCAAGCACCAGCCGCTGGTTATGTCGTGC
ACTGCAGCGGCCATTGCGATGGTGATGGAGGTGAGCCCGGGATACTCGGA
GTTGGTCTGGCTGTCAGAGAGTCTATCGTTCGCGCACTCGGCCCAGATGG
CATTGTGCCGGAACACATCAGTGCGCGGCTGCTGAAGGTGAGGGTGATCT
TCAAACACAGAACCGCCACAACCTTCATCGTTGGATACGCTCCGACTGAA
ACAGCAGCCACCTATCACAAGTCTAAGTTCTGGAAGGAACTTCGCAGCAC
TGTTGCTGAGGTGCCTGCCAGCGACCACTTGATTCTGATGATGGATGCTA
ACGCCCGTACTGGAGGAAGGGGAGAGGGAGGTGGACTAGGGGATGTCCGG
GTTTTTGGACCATACGGCAAAGACACTCTCAATGACAACGGGTCTCGACT
TCTAGCATGTGCTGCCGAGTGCAAGCTGTCGATTGTCAACATATTTTTCA
GCACGCCGAAGCGTGGGGGAAACTCGGATGCGTTCACATACGAGGGGCCG
AAGGAATCCCACCGCTGGCGCCTGGACTACATCCTGGTACGCCAGCATGA
CCGCAGGCTCGTCCGGAATATCACTGTCCACCCGAAGATGAAATCAGACC
ACCGCCTGGTTTCAGCTTCCATCCGCCAACTAGGACGGAACGCACCCAAC
CGC
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