mRNA_A-nodosum_M_contig110.10.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D7FP37_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP37_ECTSI) HSP 1 Score: 385 bits (989), Expect = 3.820e-130 Identity = 198/346 (57.23%), Postives = 253/346 (73.12%), Query Frame = 1
Query: 16 ADDEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNS-DPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEW------------FSSNGLYSSSLSNTSSTSTRSRSSAASYVSTEY---GYEIPSFCDY--ESTSIFVWAPGVANEQLPEDVGFKFGPATGGYT 999
A D+F+ SSYARN SL T++D+FWTID + +TIRVAVHAKAASGWAG G+SEMGGMEGADIVYYE A G++TDAH++VAG PV D CTQDWTLLSA+ +GGLVFEAERAL+TGD+QDR F DDS +GA T L+AAWG++ES+ YH+ NFA+G+V+MFGG E++++ +PL+ + +S S+FD+ KNFTIPT RTWYE+T + ASELP LDEYH IGFE I+Q T+++VHHLVLT G DCG AC EW + S L SS+ + S TS S S ++SY++T + +P FC ++ IF W PG N +LP+DVGF FG +GG T
Sbjct: 33 ATDDFNGSSYARNVSLDTNVDIFWTIDLEAETIRVAVHAKAASGWAGVGISEMGGMEGADIVYYEIATGNVTDAHSLVAGAPVVDECTQDWTLLSADASSGGLVFEAERALDTGDAQDRVFEDDSLDGALATRLLAAWGDSESLGYHDVNFAKGEVVMFGGSESADAAEPLVEVKASEDFSYFDVAPKNFTIPTERTWYEETCIKASELPNLDEYHAIGFEGILQEDTAEFVHHLVLTGWYGPPDCGDACFEWLDEIFGGDGSDSYDSEDLSSSNPLDLSGTSGSSSSYSSSYITTYFERNNITLPWFCYNLDDTADIFTWTPGPRNLELPDDVGFLFGNESGGST 378
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D8LD47_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD47_ECTSI) HSP 1 Score: 388 bits (997), Expect = 4.170e-128 Identity = 195/321 (60.75%), Postives = 241/321 (75.08%), Query Frame = 1
Query: 16 ADDEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNSDPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEWFSSNGLYSSSLSNTSSTSTRSRSSAASYVSTEYGYEIPSFCDYESTSIFVWAPGVANEQLPEDVGFKFG 978
A +FDASSYARN S+ ++D+FWT+D +L TI+VAVHAKAA+GWAG GVSEMGGMEGADIVYYE G++TDAHAIVAGTPVTD CTQDWTL+SAE GT GLVFEAERAL+TGDSQD F DDSA+ PT L+AAWG++E+I+YH NFA+ +VI++GGVENSN+DP+L +++ P + FFD+TAKNFT+PT RT YE++ + SELP +E+H IGFE I+Q +TSKYVHHL LTA TG DCGQ C++W L+N S SA S T IP FC + +IF WAPG A+ QLP +VGF+FG
Sbjct: 32 AQQDFDASSYARNISVDPNVDVFWTVDANLGTIKVAVHAKAATGWAGLGVSEMGGMEGADIVYYETWTGNVTDAHAIVAGTPVTDECTQDWTLVSAEAGTDGLVFEAERALDTGDSQDHVFVDDSADDVLPTRLLAAWGDSETIAYHAANFAKAEVILYGGVENSNTDPILELTTDPDIPFFDVTAKNFTVPTNRTHYENSCIPRSELPA-EEFHAIGFEGIIQTSTSKYVHHLTLTAFTGTHDCGQDCIDWV---------LANLPDDDEPSSQSAYSDPYTFNNMTIPDFCYQQFANIFAWAPGSADVQLPGNVGFRFG 342
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D7G216_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G216_ECTSI) HSP 1 Score: 377 bits (968), Expect = 1.480e-123 Identity = 194/348 (55.75%), Postives = 248/348 (71.26%), Query Frame = 1
Query: 22 DEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNS-DPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEWFSSNGLYSSSLSNTSSTSTRS--------RSSAASYVS--------TEY----GYEIPSFCDY--ESTSIFVWAPGVANEQLPEDVGFKFGPATGGY 996
D+FD SSYARN SL T++D+FWT+D + +TIRVAVHAKAA+GWAG G+SEMGGMEGADIV+YE A G++TDA+++VAGTPV D CTQDWTLLSAE G G LVFEAERAL+TGD QDR F+DDS +GA PT ++ AWG+++++ YH NFA+GQV+MFGG EN ++ DP++ + +S V FFD KNF+IPT RTWYE+T + ASELP LDEYH I FE ++Q T++YVHHL+LT GA DCG+AC EW +++S + SS++ S +SY S TEY +PSFC E IFVWAPG +N +LP DVGF G +GG+
Sbjct: 23 DDFDGSSYARNVSLDTNVDIFWTVDLEAETIRVAVHAKAATGWAGVGISEMGGMEGADIVFYETATGNLTDAYSLVAGTPVVDECTQDWTLLSAEVGDGSLVFEAERALDTGDDQDRVFSDDSFDGAIPTRVLTAWGDSDTVGYHGENFAKGQVVMFGGSENDDAADPVIDVKTSEDVQFFDAAPKNFSIPTVRTWYENTCITASELPDLDEYHAIAFEGLLQADTAEYVHHLILTGFYGASDCGKACSEWLDE--MFASEDGSDSSSTVEGGXXXXXXXXXSGSSYPSDDSSSVSFTEYFENLNITVPSFCSNYGEQADIFVWAPGTSNLELPGDVGFLLGNESGGF 368
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D7FP38_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP38_ECTSI) HSP 1 Score: 353 bits (905), Expect = 1.650e-114 Identity = 188/333 (56.46%), Postives = 237/333 (71.17%), Query Frame = 1
Query: 16 ADDEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNS-DPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEW----FSSNGLYSSSLSNTSSTSTRSRSSAASYVSTEYGYEIPSFCD--YESTSIFVWAPGVANEQLPEDVGFKFGPATGG 993
A D+FD SSYARN SL T +D+FWTID + TIR+AVHAKAA+GWAG G+SEMGGMEGADIVYYE A G++TDAH++VAGTPV D CTQDWTLLSA+ +G LVFEAERAL+TGD+QDR F DDS GA T L+AAWG++E + YH+ N A+G+V+MFGG EN+++ +PL+ V+FFD T+KNF+IPT RTWYE+T + ASELP LDEYH IGFE ++Q+ T+++VHHLVLT G DCG AC EW F G SS T+ T +P FC+ ++ IF+WAPG+ + LP+DVGF FG +GG
Sbjct: 33 AADDFDGSSYARNVSLDTTVDIFWTIDLEADTIRLAVHAKAATGWAGVGISEMGGMEGADIVYYETATGNVTDAHSLVAGTPVVDECTQDWTLLSADVSSGSLVFEAERALDTGDAQDRVFEDDSL-GA--TRLLAAWGDSEFMGYHDGNLAKGEVVMFGGSENADAAEPLV-------VNFFDATSKNFSIPTVRTWYENTCIPASELPKLDEYHAIGFEGVLQDDTAEFVHHLVLTGFYGPPDCGNACFEWMDEMFGDGGSSYSSSDMTNIT-------------------LPWFCNDLEDAADIFIWAPGMQSLDLPDDVGFLFGNESGG 336
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D7G337_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G337_ECTSI) HSP 1 Score: 315 bits (807), Expect = 1.270e-99 Identity = 173/353 (49.01%), Postives = 221/353 (62.61%), Query Frame = 1
Query: 16 ADDEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNS-DPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEWFSS-------------------NGLYSSSLSNTSSTSTRSRSSAASYVSTEY----GYEIPSFCDY--ESTSIFVWAPGVANEQLPEDVGFKFGPATGGY 996
A D FD SSYARN SL T++D+FWT+D + ++IRVAVHAKAA+GWAG G+SEMGGMEGADI H ++ + WTLLSAE G G LVFEAERAL+TGD QDR F+DDS +G PT ++ AWG+++++ YH+ NFA+GQV+MFGG EN ++ DP++ + +S V FFD KNF+IPT RTWYEDT + ASELP LDEYHVI FE ++Q T++YVHHLVLT GA DCG AC EW + SS+ S+ TEY +P+FC E IF+WAPG +N +LP+DVGF FG +GG+
Sbjct: 21 AADGFDGSSYARNVSLDTNVDIFWTVDLEAESIRVAVHAKAATGWAGVGISEMGGMEGADI-------------HCVLRDSY--------WTLLSAEVGNGSLVFEAERALDTGDDQDRVFSDDSLDGTQPTRVLVAWGDSDTVGYHDENFAKGQVVMFGGSENDDAADPVVDVKTSEDVQFFDAAPKNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGHACNEWLDEIFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVSF--TEYFENLNITVPTFCSNYGEQADIFLWAPGTSNLELPDDVGFLFGNESGGF 350
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: A0A6U4MP62_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4MP62_HEMAN) HSP 1 Score: 150 bits (380), Expect = 1.050e-37 Identity = 82/231 (35.50%), Postives = 134/231 (58.01%), Query Frame = 1
Query: 106 QTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMF----GGVENSNSDPLLGISSSPSVSFFDITAKNFTIPTGRT--WYEDTYLLASELPT---LDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEW 771
+ I + + AKA +GW GFG++E+GGM+G+DIVYYEA + +TD++A+ G P D C+QDW L SAE G + E R L D++DR F DD+A +PT +I AWG+ +++SYH + A+ QV F GG S + + + + ++ ++ + IP R+ ++E+ Y+L +P E+H++GFE + T K++HH V++A ++ V W
Sbjct: 50 EEIMLCLQAKA-TGWVGFGLAEVGGMKGSDIVYYEAKSNKLTDSYAVENGMPRADACSQDWKLRSAENVDGTMTVEMSRLLVVTDTEDRNFEDDAALPMAPTAVIMAWGDDDNLSYHAQSRAKAQVRFFQQGAGGGGVSMQERIDALKADSTIQKVEMLQSDHPIPDDRSTQYHEECYILKDIMPAGSEAGEFHIVGFEPFLDPRTKKHIHHYVVSAGNDCENSEGMTVVW 279
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: A0A7S0ASV8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASV8_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.690e-37 Identity = 93/240 (38.75%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 25 EFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNS--DPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLD-----EYHVIGFEAIVQNTTSKYVHHLVL 723
+FD S+Y G + + WTID+D IR+AV A+A +GW GFG++E GGM+G+DIV YEAA +ITDA+A+ P TD +QDWTLL ++ G ++FEAER L+TGD DRA D P +IAAWG+T ++SYH +N A+ + + + S + D + + + D+ N I T Y D +L L H+IGFE ++ + +K++HHLV+
Sbjct: 45 KFDHSAYLAGTIEGEGVAVHWTIDSDASKIRLAVAAQA-TGWVGFGLAEAGGMKGSDIVLYEAATATITDAYAVEYVAPKTDD-SQDWTLLHSQVEDGFIIFEAERLLDTGDPMDRAIGFDGEFVIPPHRVIAAWGDTPTVSYHGDNRARSALRFYPAHDKSGTEEDVFADEMAQEAEGYIDLIMPNHPISLDETEYVDLCFSHEDLINLGMPADVPLHIIGFEPLIDS--AKHLHHLVM 280
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D7G217_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G217_ECTSI) HSP 1 Score: 144 bits (363), Expect = 9.040e-36 Identity = 86/198 (43.43%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 487 MFGGVENSNS-DPLLGISSSPSVSFFDITAKNFTIPTGRTWYEDTYLLASELPTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCGQACVEWFSS---------------------NGLYSSSLSNTSSTSTRSRSSAASYVSTEY----GYEIPSFCDY--ESTSIFVWAPGVANEQLPEDVGFKFGPATGGY 996
MFGG EN ++ DP++ + +S V FFD KNF+IPT RTWYEDT + ASELP LDEYHVI FE ++Q T++YVHHLVLT GA DCG AC EW + SS+ S+ TEY +PSFC + IF+WAPG +N +LP+DVGF FG +GG+
Sbjct: 1 MFGGSENDDAADPVVDVKTSEDVQFFDAAPKNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGNACNEWLDEMFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVSF--TEYFENLNITVPSFCSNYGDFADIFLWAPGTSNLELPDDVGFLFGNESGGF 196
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: A0A7S2UP52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP52_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.070e-24 Identity = 74/220 (33.64%), Postives = 105/220 (47.73%), Query Frame = 1
Query: 112 IRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAAAGSITDAHAIVAGTPVTDVCTQDWTLLSAEKGTGGLVFEAERALETGDSQDRAFTDDSAEGASPTTLIAAWGNTESISYHENNFAQGQVIMFGGVENSNSDPLLGISSSPSVS-FFDITAKNFTIPTGRTWYEDTYLLASEL-----PTLDEYHVIGFEAIVQNTTSKYVHHLVLTACTGADDCG 753
I +AV ++ +GW GFG+SE GGM GAD+V + ++TDAH P+ D C Q+W L+ ++ G L+FEA R L+TGD+QDR +DS+ +I AWG YH N +G + FG + G F++ A NF IP+ T Y + +L P HVIG E I+ Y+HH L + G
Sbjct: 74 IHLAVAVRS-TGWVGFGISENGGMRGADVVLFSGRE-TLTDAHITDTLYPLPDKC-QNWKLVYSQTKGGFLIFEAVRLLDTGDTQDRKIINDSSLLMPAHRVICAWGEDSGYGYHGENRVKGSIRFFGSDSTGDEWETFGQRMKQEAEGSFELAANNFIIPSEETTYGEFCFFEGDLIREGMPPDTPLHVIGMEPILPKEDMPYIHHFTLYGLPSGESNG 290
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Match: D7FSK3_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK3_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.280e-23 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 22 DEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWAGFGVSEMGGMEGADIVYYEAA 216
D+FD SSYARN SL T++D+FWT+D + + IRVAVHAKAA+GWAG G+SEMGGMEGADIV+YE A
Sbjct: 36 DDFDGSSYARNVSLDTNVDIFWTVDLEAEAIRVAVHAKAATGWAGVGISEMGGMEGADIVFYETA 100 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig110.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig110.10.1 >prot_A-nodosum_M_contig110.10.1 ID=prot_A-nodosum_M_contig110.10.1|Name=mRNA_A-nodosum_M_contig110.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=333bp ISRASADDEFDASSYARNASLGTDLDLFWTIDTDLQTIRVAVHAKAASGWback to top mRNA from alignment at A-nodosum_M_contig110:545443..551356+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig110.10.1 ID=mRNA_A-nodosum_M_contig110.10.1|Name=mRNA_A-nodosum_M_contig110.10.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5914bp|location=Sequence derived from alignment at A-nodosum_M_contig110:545443..551356+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig110:545443..551356+ >mRNA_A-nodosum_M_contig110.10.1 ID=mRNA_A-nodosum_M_contig110.10.1|Name=mRNA_A-nodosum_M_contig110.10.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=999bp|location=Sequence derived from alignment at A-nodosum_M_contig110:545443..551356+ (Ascophyllum nodosum dioecious)back to top |