prot_A-nodosum_M_contig11.109.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.109.1
Unique Nameprot_A-nodosum_M_contig11.109.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length408
Homology
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BLAST of mRNA_A-nodosum_M_contig11.109.1 vs. uniprot
Match: D7G4V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4V7_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 9.240e-65
Identity = 111/197 (56.35%), Postives = 155/197 (78.68%), Query Frame = 0 
Query:  212 AEEKVRLSQVEQLDRERRLSMSGNGHRGDIAGTDIVANVYKIEEDNRLLARLGAFQNPIVVSTLIAGFSLVLFDVAETDLARNLAIMSFGLEVSATMVLSLIDFHGHQLYSYASDVKPLTRKFLRRMLPLTIFALVAFSLGIVTFVISFVAEASESMGRSWMWVLGLAFSPTVITGLLFFVSTIQVRRHSFP--PPR 406
            +EE+ R+S+V++L RERR S++ +   GD AG D V  ++K+EED+RLL RL AF  PI+V+TL++GF+L+LFDVA+TDLAR LA++SFGLE S++ +L LI F G QLY++++D+KPLTR+FLR+M  +T+ ALV FSLG++ FV+SFV EASE +G  W+ VLGL   PT++ GL+F +ST+QVRRHS    PPR
Sbjct:  232 SEEQRRMSRVQELIRERRQSVNSSEQLGDEAGEDTVFEIHKMEEDSRLLVRLSAFNVPILVATLLSGFTLLLFDVAKTDLARRLAVLSFGLETSSSTMLCLISFRGQQLYAHSTDIKPLTRRFLRKMCNVTVLALVLFSLGVIAFVVSFVVEASEELGVGWLAVLGLVLCPTMLAGLMFVISTVQVRRHSIESVPPR 428
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4V7_ECTSI9.240e-6556.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..173
NoneNo IPR availableCOILSCoilCoilcoord: 90..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..43
NoneNo IPR availableCDDcd14686bZIPcoord: 137..171
e-value: 0.00570357
score: 32.9025

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:1425775..1427797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.109.1mRNA_A-nodosum_M_contig11.109.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 1424140..1443388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.109.1 ID=prot_A-nodosum_M_contig11.109.1|Name=mRNA_A-nodosum_M_contig11.109.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=408bp
MSNISAIWPRVNLGHNTDSREDTAEKVSTQVLDKDKDSVAIASDTPKDKA
NENMYVVGSAPPHTDNTESARRPQDAGGDTHAQSSGGEAISMINNSIAQL
EVEILKIEERIEEVTEASRGGHEYRGKRDQALTKEKDRLVRKEQQLREEK
HQLREEKHQLREEKHQLREENLIFLKSSFRGRAANDVEDEGPTKRVSFFM
TSAFVDDPVGAAEEKVRLSQVEQLDRERRLSMSGNGHRGDIAGTDIVANV
YKIEEDNRLLARLGAFQNPIVVSTLIAGFSLVLFDVAETDLARNLAIMSF
GLEVSATMVLSLIDFHGHQLYSYASDVKPLTRKFLRRMLPLTIFALVAFS
LGIVTFVISFVAEASESMGRSWMWVLGLAFSPTVITGLLFFVSTIQVRRH
SFPPPRE*
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