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Homology
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI) HSP 1 Score: 280 bits (716), Expect = 3.780e-93 Identity = 137/161 (85.09%), Postives = 142/161 (88.20%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
MSYLLPHLR+GWAVDQAIINEE+RVVCLRFGHDHD+TCMQMDEVLAGIAE+VKNFCAIYVVDV+EVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQE MIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct: 1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQE-------------------MIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM) HSP 1 Score: 255 bits (652), Expect = 2.010e-83 Identity = 121/161 (75.16%), Postives = 133/161 (82.61%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
MSYLLPHL SGWAVDQAI+NE DRVV +RFGHDHD TCMQMDEVL G+AE+VKNF AIYVVD+TEVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK E M+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct: 1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSE-------------------MVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.040e-81 Identity = 122/164 (74.39%), Postives = 135/164 (82.32%), Query Frame = 2
Query: 257 SYSMSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
S +MSYLLPHL SGWAVDQAI+NE DRVV +RFGHDHD TCMQMDEVL+G+AE+VKNF +YVVD+T+VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK E MIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 84 SGAMSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLE-------------------MIDIIETVYRGARKGRGLVISPKDYSTKYRY 228
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA) HSP 1 Score: 251 bits (641), Expect = 1.460e-81 Identity = 122/167 (73.05%), Postives = 138/167 (82.63%), Query Frame = 2
Query: 251 NFSYS-MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
NF+ S MSYLLPHLRSGWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA++VKNFC+IY+VD++EVPDF MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQE MIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct: 8 NFACSAMSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQE-------------------MIDIIETVYRGARKGRGLVISPKDYSTKYRY 155
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA) HSP 1 Score: 250 bits (639), Expect = 1.900e-81 Identity = 121/161 (75.16%), Postives = 134/161 (83.23%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
M+YLL HL SGWAVDQAI+ EE+R V +RFGHD+D TCMQMDEVL+GIAE+VKNF IYVVD+++VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQE MIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQE-------------------MIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI) HSP 1 Score: 250 bits (638), Expect = 2.690e-81 Identity = 120/161 (74.53%), Postives = 132/161 (81.99%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
MSYLLPHL SGWAVDQAI+NEEDRVV +RFGHD D TCMQMDE+L IA++VKNF IY VD+TEVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQE MIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct: 1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQE-------------------MIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA) HSP 1 Score: 247 bits (630), Expect = 4.570e-80 Identity = 118/161 (73.29%), Postives = 132/161 (81.99%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
MSYLLPHL++GW+VDQAI+NEEDRVV RFGHD+D CMQMDEVL GI ++VKNF IYV+D++EVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQE MIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQE-------------------MIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A7S3SL24_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SL24_9SPIT) HSP 1 Score: 243 bits (621), Expect = 4.210e-78 Identity = 118/162 (72.84%), Postives = 132/162 (81.48%), Query Frame = 2
Query: 263 SMSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
+MSYLLPHL SGWAVDQAII+EE RVVC+RFGHD+D CMQMDEVL IAE VKN+C IY+VD+TEVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WA ++KQE +IDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 41 AMSYLLPHLNSGWAVDQAIISEEARVVCIRFGHDYDPICMQMDEVLYSIAELVKNYCVIYLVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAIHDKQE-------------------VIDIIETVYRGARKGRGLVVSPKDYSTKYRY 183
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA) HSP 1 Score: 241 bits (615), Expect = 8.370e-78 Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
MSYL+PHL +GWAVDQAI++EEDRVV LRFGHD+D TCMQMDEVL GIAE VKN+ IY+VD++EVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA +KQE MIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQE-------------------MIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A6S8YQP1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8YQP1_9STRA) HSP 1 Score: 241 bits (615), Expect = 8.370e-78 Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 2
Query: 266 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 748
MSYLLPHLR+GWAVDQAI+NEEDRVV +RFGHD+D CMQMDE L+ IA++VKNFC +Y+VD+TEVPDFN MYELYDPCTVM FFRNKHIMIDLGTGNNNKI+WA N QE +ID++E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct: 1 MSYLLPHLRTGWAVDQAILNEEDRVVVVRFGHDYDPVCMQMDEALSKIADKVKNFCVVYLVDITEVPDFNTMYELYDPCTVMTFFRNKHIMIDLGTGNNNKINWALTNTQE-------------------LIDLIETVYRGARKGRGLVVSPKDYSTKYRY 142
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G4B1 |
| Preferred name | DIM1 |
| PFAMs | DIM1 |
| Model size | 834 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K12859 |
| KEGG Pathway | ko03040,map03040 |
| KEGG Module | M00354 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005681,GO:0005682,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031090,GO:0031965,GO:0031967,GO:0031975,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046540,GO:0065003,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1990904 |
| Exons | 4 |
| Evalue | 7.38e-96 |
| EggNOG OGs | KOG3414@1|root,KOG3414@2759|Eukaryota |
| Ec32 ortholog description | Thioredoxin-like fold |
| Ec32 ortholog | Ec-02_002020.1 |
| Description | spliceosomal complex assembly |
| Cds size | 486 |
| COG category | S |
| BRITE | ko00000,ko00001,ko00002,ko03041 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866485.8017197-UTR-A-nodosum_M_contig11:230820..231085 | 1680866485.8017197-UTR-A-nodosum_M_contig11:230820..231085 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig11 230821..231085 + |
| 1680866485.8469188-UTR-A-nodosum_M_contig11:242280..242289 | 1680866485.8469188-UTR-A-nodosum_M_contig11:242280..242289 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig11 242281..242289 + |
| 1680866485.8552833-UTR-A-nodosum_M_contig11:243034..243108 | 1680866485.8552833-UTR-A-nodosum_M_contig11:243034..243108 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig11 243035..243108 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866485.8122168-CDS-A-nodosum_M_contig11:231085..231280 | 1680866485.8122168-CDS-A-nodosum_M_contig11:231085..231280 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig11 231086..231280 + |
| 1680866485.824393-CDS-A-nodosum_M_contig11:234758..234953 | 1680866485.824393-CDS-A-nodosum_M_contig11:234758..234953 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig11 234759..234953 + |
| 1680866485.8369868-CDS-A-nodosum_M_contig11:242184..242280 | 1680866485.8369868-CDS-A-nodosum_M_contig11:242184..242280 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig11 242185..242280 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.20.3 >prot_A-nodosum_M_contig11.20.3 ID=prot_A-nodosum_M_contig11.20.3|Name=mRNA_A-nodosum_M_contig11.20.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=162bp
MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAE EVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNN KISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVV SPKDYSTKYKY* back to topmRNA from alignment at A-nodosum_M_contig11:230821..243108+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig11.20.3 ID=mRNA_A-nodosum_M_contig11.20.3|Name=mRNA_A-nodosum_M_contig11.20.3|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12288bp|location=Sequence derived from alignment at A-nodosum_M_contig11:230821..243108+ (Ascophyllum nodosum dioecious) AAAATGAAACGCTTCCGAATGGTTTCGAAAACCCTGAATCGTCGCGACGT
TCAACCCACCAGCAACGCGCCTGTGCTGAGGCTGGAGCACACCGCACTGG
GGATCAAAGCAGTGGTAGGAAGGGAGTGAAGATTTTCTGAGGAGGAAGTC
CTTGGCGAGTTGTGGCCGGAGACGGAGCGATTTGTTATTCGAATCTGAAG
TCGATTCTATACGCAGTACAAGTTTGGGATTACGGGGCTTCTGTACACCT
AATTTTTCTTACAGCATGTCGTACTTGCTACCCCACTTGAGGTCCGGCTG
GGCGGTTGACCAGGCAATCATCAACGAGGAGGATAGGGTTGTCTGCCTCA
GGTTCGGCCACGACCACGATATGACATGCATGCAGATGGACGAGGTCCTC
GCCGGCATCGCGGAGGAGGTGAAAAACTTCTGCGCCATCTACGTGGTGGA
CGTCACCGAGGTGAACGTACTGTATTTGTAGGCAGAGGAGTGCCTCGCGC
GCGGACCGTTCCACTTGGCGGGTGAAACAAGGCTTCCCGAACTGATGCCT
GTACGCTTGCTTGGTTTTTGATCCACCTCGCGGACCGGCGGCGGAGGGAT
AGGCCGAAATAGGGGCTGCATGAATAAATAGTTTTGTGCTTCGGAGGGAG
CGGGAGCTCGGGCGCGCTGATGGCGTTGCTTTTGCTGACACCCCACTACA
GTATTTTGTTGTGTTGGTTCCACGAATCGATACCCTGATAGAGCAGGTTG
ACCTCATCATCAATTAATAGTATGCGGCATGGTCTCTCATCTACGGCGAG
GTACGTACGACACTACAGCAGTGATACACTGCGATAGTACTTGTCCTGTA
CCATTGTACTGTTGTGTATGTTACCATACATAGATACTACAGCACTACAC
TATGTATGCACAAGTATGTATGTAGGTATGTATGCATGGTCACACACATA
GCAAGAATATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAG
GTCAACAGGGAAAATGAATATTTCCCTATCCCCGTTCGCGTCTGAGAATT
TGGTCTCGCGAGACgGGTTTGGCAGTCCCGTGCCGCGCTCATCTCCATAC
TCAGCAGGCTGAAACTGATGCTTACTTACGGGATCCCTCCCGAGTTCCGC
GGCGGCGTCCATTTTTTTTTTCAAAACCGCCATACGCCACTTTCTCAGTC
CCGAGTTTATCGGGTCACGCAAAAGTGCGTACCGACGGCGTTCACTGCCG
AGAGTCCGCCGGCACATGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGT
GCTGCCTTGGCAGGTCACCATGGACCATTTGACATGCGCCTCTCGTTCCC
ACACCCTACGCCCGAGTGGTTTACATATTGCACTATTAATAGTACAGCGG
TGGATAACCTCGCAGTTCACGACAGAGTGCGGATTTCGCGAGTTCGAACC
CTGACAGGATGATTTCTTTTTAGTGCAGTATTCTGGTTACCGTACTGGTA
GCGGAAAGCGAGAGAACGCAAGTGAGTCATGCCGGTCGCCCCGGTGGTTC
AGTTGGTAACCTCGAAACCTCCTGACGTTGGGACGTGAGTTCGAGTCTCC
GGCACAGGGCCAGTAAACCTCAAGGTAGTTCCAGTAACGGGCGCTGCCTT
TGCATCACCACGTACCAATTAATGTGCGCCTCTCTTTCCCGCGCACACTA
TTGGTATGAAGTGGGCATGTTGAAAGTATCGGCGGTTGTATCATTGTAGA
GATATACGTCCGACATCGTCACCAAGCGGGTTGGATTGGCAATGTTTTCC
GGTTGATCCATACTATGCTTGACGTGATGACCATACATATATACTGCAAC
GTTGTCATCCCCCTATGATCCCTAAAGATCTTCCGAACTCTCCCCGGTTT
TCGCTTACGATTTTTGAGCGCGATATCTCTGTGTGTGTGTTGTCATCCCA
TTTATTCTGGACGTCAGACTTGTGGACGCACCAGCCGGGGTCACACAGGA
TTTCTCATCCACCTTCCTTCTGCGGTGCTTGCCTTAACTTTTTTCGCGAG
AAAGATTCAGCCGTCCCTTTCCCTCGTCGATTGTGATGTCGAATTTTGTG
TGCTCACGAATTAATCGTTCGGCAGTGAACGCCATCGGTACGTAATTGCG
CGATCCGATAAACTCGGGACTGACCCGATGGCGCATGGCGGTTTAAAATA
AAATATAGTATAGCTGTCGCTACGAACTCGCGTTCGATGATATTTGTAAC
TATCGTCAGCTGTGTGCGTTGGTGTGTGTGTGTGTTTGATCCCATATATT
CTGGCGCCAGTCTACGCCTTTCGGTGTATGGTTGACGTATCACCCGGGGT
TTGAAAAGAAGAAAACAAGCACAATGTAACCGCCTGAGTCCTCTACGTGG
CTTGCTCTGTGTTTTTTTTTTGTTTTTTGTTTTGCAAAATGAACGTTCCC
CATTTTTCTTGTTTCCCTTCTGTTAGGTATATAAAGTCAAAAGTGCGGCA
CATTTTATAGGACTGGCACCATAGCACATTGGCCCAGTGGGAATTTTTAT
AGTCATCTAGACTGAGTTCAATTCCCCCTGCTTGTTTTTTTTTGTTTTTG
AAAAGGAATGATCCCTCTCCTAAAAACACGTGTGAACGGAGCTCGCTATC
GCTCGCCGGAAGGATCTCTGTAAGGTAGACGGACCCCACCGCGGCCACTG
TCGCTCGCCGGAAGGATCTGTGCAGGCTAGGCGGACCCCACTGCTGCGGC
GTGGACGGTGCTCGCTGTCGCTCGCCGGAAGGATCTGTGTAGACTAGGCG
GACCCCACTGCATCCGCGTAGAGGGTGCTCGCTATCGCTCGCCGGAAGGA
TCTGTGTCGGCTAGGCGGACCCCACTGCTGCGGCGTGGACGGAGCTCGCT
ATCTCTCGCCGGAAGGCTCTCTGGCGCCAGAATAGATGAGAAGGACTGTA
CATACAGTAGTCTTCAAGGATTTGATTGGCCAGTAATTGCACCGTGGTCT
ACGACGGCGGACGTTTTTTTACGTACTATATTTTCCCTCACCCACGCTTA
ACAAACTCGCTACGCTCGTAATAATCGGACGCCGCCGCGAAAATCGGGAG
GAATCTCGTGAGTAAGCACCAGGTTCAGCATGAGTATGGAGATGAGCAGG
TTGACGCGGGACAGGACTGCCGAACCCGTCTCGCGAGACCAAATTCTCAG
GCGCGAACGAACGGAGACAGGGAAATATTCATTTTCCCTGTTCAGCTGAC
CACGAGCAGGATTGGCAACCATATCCGGTTGATCCTTACTCTTGCTATAT
GTGATGTCGATGGGGACGTGTAGCTCCCCACTGCTACAAACCGGGCAGCT
CTAGTAGTCCAGAATGTGAAATGATAGTACTTAGTACCGGTACTATAGTT
GTAGGTAGATGATGATACACTTAGTACCGGTACTATAGTTGTAGGTAGAT
GATGATACACTTAGTACCGGTACTATAGTTGTAGGTAGATGATGCTACAC
TTATCTCAATTGCTTAGCATAATTTAAGCTATTACTGTTGTGTCCCAAGC
TTGGCTAAGAGGGGCCCGGGGACAAACGAGTGAGATGTTATTATCATGAC
TCGTAGGCTGTGCTTTACCCTCCAAGTTATAGAGAGAGGACTCTGGTGTT
TCGTGTCACATCAGCTCTCTCGTCTTACCGACTCAGTCAGACAAAGACGA
AAACAGCGCGGGGCGAGAAAAATAAATGCATGGCTCGACGGCGCTTCGCG
CTGTGACCATCCATCAGAGCCCGTGGGATGTATTGAGCGCTTCGGCTTCC
TTTGGCCCGTTGCGCACCGGCGTGAGGTATGGGTGTGGCGAACAGTCTGT
TACCAACACACACATACACGCACGCACGTCCGTGTTTCGTGACTATCCTC
CCCCTTGCCCCCCCTCCCTTGCCCCATCTCCCTCGCAGGTGCCGGACTTC
AACGACATGTACGAGCTGTACGACCCCTGCACGGTGATGTTCTTCTTCCG
CAACAAGCACATCATGATCGACCTGGGCACGGGCAACAACAACAAGATCT
CCTGGGCGTTCAACAACAAGCAAGAGGCGAGAACGCATTTCAATTACGAA
ACCCCAATCCTGGCTTACGCACTTGATGGTACTGTTTGTACTCTGGTGGA
CACAGTAGAGTACGTAGGACTTTCTAATGTAGCTGGGCGTGAGATCCCCC
CCCCATGAAGCTTTATCCATGCCACAGAATACTGCACTTTGAACTACCGT
TGCGTGCGGCTTCCAACCTTTAAATACCGTACCAATTTTTTTATTCTTCT
CTCTCAAGATGTTTTGAAAAATCGAATCAGCACCGCTCTCGGAGCCGACG
CCATGCCACAACGGCGATAGCGATGCTTAAATCTCGGCACGAAGAGCATA
TAAATGATACAGCGTCATCAACAACTGTCGGGAATGCCTCAAATTCAGTA
AGAATACACCCTACGCTACCAGAGTCTCAACAGGTGCACCGTGTTGCACG
GACAGACAGGTCTTACAGGTGCTACGCGTCCCGAACTTCTGACTCAACGC
CAGCCGCGTCCGTTTGCTGGGCCACTTTTTTCAGCCCCTTGGCCATGTAC
TGCGGATTGATCGCACCCAGTTTGCATACCCAAGAGCGCCTCACTCTTTC
CGAGTCCTGTTGTAACAGTATCAGACCTACGCCCACGCTGCGTGAGCTTG
CTGCTCGCCCAGGCGTTCGTTGCCCATGATGAGAATCGTGGACATCCCGT
GCCGTTCTCCTCCCGGCCCGTCTTGATCTCGGCAACATCTCGCTCTCGTG
ACCCAATCACCAGAGTCGCGCCGGTATCACCAGAGTCGCGGCGGTGTGAA
TGAAGGTCGTCTCAACCTGGACGATATCCTGCAGCTCGTGCACTTACCGA
GATCCTCCCGACGTCTTGATTGATTGATTGATTGAATTCTCACATAAGCT
GATGTAAAAAATCCAGCCCGTGGTCACAAGGTAGAAAAACACCATTTGGA
AGGGAAAAACGTACGACGTACTCTCCATACAAAGAGAAAACGGCAATGGT
ACAAAAAATACTCGGAAAAAGCGACATGTCCAAATAAACCAAAGGAAAAA
AGAACGAAACACGTGTGGCTATCGGGGCGCCTGCATATCGAAGAACGATT
GAACGAAGGGCCGCGGCTCCAATGAAAGAATAAGACAAATACGAAGCAAA
ACAAAACAAAGGCAACACCAGAGAAAGACGTCGTGACATCTTCAAACCAA
AGGCTCGGAGGATACAAGTTCGCGCCACTTGTGACTAGTCAACAAGGACG
AGCGAATCAGCACGAGCCCGCTTGCTTTGGGCTATCCTGTCCTTAGTCCT
TCCCGTCACGTTCGGGCATACGACTGCATGCCGTAGTCCAGCCCTGGCTT
TCTCTGCAACGATCCAGTTCGTCATGAAATGTTCCCCCCCTTATTTCGCC
GTTCTGCGTCATTCCCCCTCGTCCTGGACTGCAGTCGTCCACTGGTCGGC
GTTGATACCGAAAGCTTTGAGGTCATCCAGGAAACACCCCATCCACTATT
TTTCCTGGCCCCCCACGCAGCCCGCGCCCCCCACCAATTCTCCGAACATC
ACGTACTTCGGCAGTCTCGTATCCTCCATGCGCGCCTCAAATCCCGCGAA
CAAGATCCGCCTCCTGCATAAAGTCGCCTCGATGCTCTCATTTCCTGTCT
TGATAAGCGTGTCCAGATAGGAAATCGGGTGGTCGGCGTGATTGTGCTTT
CGCCAATCGATGCAGCGAGTCAAGAACCTGTGGAGGGCTCGGCGCAGCGT
GTCGGAGTGGCACGCGCGCGGGCTCCACGTGACGCAGCCGTACAGCATTG
TCTCGAGTACCTTGGCTCTTAGCATCTGGATTTTGAGCTCGAGGGGAGCG
CTCGGTCGGTCGTACAGTTCGAGGGTGTACTTCCGGAAGCTGCACCATGC
GTTGCGTATGCGCCAGTCGACCTCGATGGACAGGTTGACATTGTGGTTGA
CGTTTCCCCCGAGGTATACAAACTCGTTTGTCTGGTTGTACACCTAGCCC
GCTGCCTCTACGCTGAATATGGCGGTGGACTCCGGCATCCCCTTCGCGTG
TAAACATATGACCTCATTCTTGACCTCCGATACGGTGAGACCAAACCCCG
CGCACACGACCACGATCACTCCCATCATCTTCCTCAGCTGCTCGAGTGAT
TGCGAGACGACCCCGGCATCGTCAGCATAAAGCATGCCCCAAAGCGGCGT
CGCCAGGACTGACTCTCCGGCAGTTGCTTCCCCCCGCCCCCCGCTCCCTT
TTTCTTCCTCAGGTGTACGAAAGCGTCCATGATGCCTTTGTCCGCCTTGA
AACGCGTAGAAGCCACGATTATAACCGCCGCGAAGAAGATGTTGAACGGA
AGGGGTGCGAGCACGCACCCTTGACGAAGGCCTTGTTCCACAACGAACCA
CCCCGAGCACATCATGAGCCACGGCTCAGCCCACGTTTCCTCCAGCCTTG
GCACGATACGTAAACTTCCGAACAACGCGCCGCCAACACATGCTCACCGG
GAGGCTCGAACACCGGTACGGCAGGTGTGTGCCGAAATCTTCGATTCGCG
CCCTGGTGATAGGCGTTGTGTCTGTTCGCTTGCATCTCACGCCAGAGCTT
TTCCAGCGCGTGCACCCATATCGCGCTATCGACCCGCGCTACCACGCGGG
CAACGTGCTCAGTTCGCCCCCGGTCCACCTATAACCGTCTCGATCAACCG
GTTGGCCTTCTGTCGCGGCGTCCGGCCTCTCACGTGCCCCGCCCTCGCTT
AGCATCGGGGCAACCCTCGGTCGGTCGAAGCGATGGCGCGTATTCCTCCT
GTCGAAATTCACGGGGTCATCCTTGGCAAACCCCCGTGACCGACCGAAGT
TTCGAAAAGCGGGTCACCCCAGGGGTTGGTTCTATCTCGTCCCCGCCTGG
GTGATAAGGTGATCGTGTACAGTTATAACTCAAAGTAACCCCCCTGTACG
TCTGCCATCCGAGAAGGCCCCGCGAAGCACAGAGTATGACGGTGCAGCTA
CACAAGCTCGCGAGAATGAAAATATTTGGCGAGATTACGATCGCTGGTGG
AAATACCCGCGCGTGCGGTACGTGTGTATGCGCGGTGATAAGAGTAGCAC
TCCCCACTTCCTCCTCCACAGCGCCCCCCTCCCCGTTTCTTCCCCTCAGT
TTTGTCGTACTATAGAGTTAAACTATTATCTTAGATTGAGATGACGCAGC
TCTCGCTAGTCACTCATGATGTTGATAGCTCAGTTAGTTGCTATTGTCAG
CTTGGTGTGCGCCGGGATTTTTTTCGCTTCTCCTGCTGCGGTTTCCGAGG
CTCCTGAGCTGCTTATGCTGCTCATGCTGTTTGTACTGCTCATGCTGCTT
GTGATGCTACTGGGGCGGTTGTGTTTCTTGCTGGGGCTGCTGCTGCCCCA
GCTGCTGCTGTTTGTTCTAGCCGCCGCTGGAGCTGCTGAGGCTGCTGCTT
CCATTGCGGATGCGCAGCGATTCGTCGCCACTCGCCGCTGGCGACGGCGG
CCATTTTGCGCCCTAGTTAGCTTTTTGCGAAGGTTTGCCTCCGCCACAAG
CGACTCTCCATCGTGTTCACGCCTTGCTTGTTTTCTCAAGCCGCCCTTGA
GGTCCGTCTACTGCTTGAACTTTTGGAGAGACTGTCGCGAGGGAGACGCT
GGTTTTGTCCCCCACAACCTTACAGGACACGATGTAGAACCGGGCACGCA
TTTGGTGGTTGAAACCCCTTGCTCTCCTCGCCGTTATTACCCGGCTGCCC
TTCGGCAAAGGTTGTGACCCAATGGGCGTTTATTTAATACACCACCAAAC
CCGAGGAAACGACTCGCTAATATAGCGTTAGGCTGGTGCGCCTGCAATTT
CAGAGAAAAAGCTTGTTGTCGCCTTTGTTTTTCCTTCTTTTCTTTTTTGT
ATTTTAAGAAAAATCTGAACGCATCTAAACCTTCTGAGCACCCAGTCAGG
GGGAAAGATGTTGAAACGTTTAGGTGGGAAATTGGCTGTAGGGACAAAAT
CACTTCGTTAGATTTAATGGGTCCCCCAATGTTGGAGCACAGGGTCAACA
GCATAATATCGGGGAAAAACTCACCGTTATACTGTACACTTACATTGATC
GCCATGCAGGGACACCAAAACAAACGCAAAAATACACATTATACTGTACA
CTTACATTAATCGCCATTTTTTATAAAGGCCGGTCGACCCCGGTAGCTCA
GTTGGCACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGG
CAAACGGGATTTTTCTCACTAAAAACTAAAACCAAAAAAAATGCCCAACG
GGTGGAGAACGATTAATTCGTTAGTACACAAAATTCGACTTCACGGTCGA
CGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACAAAAATCAAGGCACGC
ACCGCAGAAGGAAGGTGGATTAAAAATCCTGTGTGACCTTCCTCCTGTGT
GACTCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAATGGATGGGAAG
AAAACACACACACAGAACATATAAACGTTAGTGTATTGTGAGATTGGCGA
AGTGTAGTACATTTTCGTTTTGCACGTTTTCACTTCATACTATATACTAT
ATATTACAACTGTGACAGCAGGAGGAGTACGGTATAGACTATGACAGCTA
GTGGTAGTGGTAAAACTCAAAGGATTTGGGTTAAGAATTAGAGGAGGGGG
CAGAGAAGACCACGATCGCAGATGTCTTCAACATAATACAGATATCTACA
TCATGGTCCTCTCTGTTCTCGTTTCAATGTAGTGACTTCGTCTTGACAGC
CTATGTAACAGTATATTATTACTACCATGTTTGATGATATGTACTATTTT
GTCTTCGCTGTTTTTGTGGTGTCCCTGCGTGGAGATTAATGTAAGTGTAC
AGTATAACGGTGGGCTTCTCCCCGATATTTTACTGTTGACCCAATGTTAC
TAACATAGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATTTGCAG
CCTATGATCCCGTCTATACGTTTGACATTTTCCCCCCCTGACTGGGGGAT
GCTCAGAAGGTCTAGGTGCGTTCTGATTTTTCTTTAAACACCAGTATTCA
CCTGAAAGTAGACGAAGAGAATCTTTGTTTTTAATTCCGCCGCATTTTTG
GGATTTCCTCCTTTTTCTTTCGTTTCGCCGCATTAGACGAAGAGAATCTT
TGTTTTTAATTCCGCCGCATGTTTGGGATTTCCTCCATTTTTTTTTCATT
TCGCCGCATTTTTGGAATAAGGCTCATGAACTTCGAGGCAAAAAAGTGTT
GTATTTTGTCTCGATCAAGGTGCTCCCACGGGTCGATGATCTGAAAGCCC
ACTTTACTTTGGCTTCAAATGTGAATCTTGCAAGGCCTCATAACACGATG
TAGAGGGGACTCGCGAACGCTCGCCGAAGGAGATCGTCGGCCTCGAGAGA
CCCACGCCAACGGCGTGGACAGAGATCGCTATCGCTCGGGGAAGGATCTC
GCCATCTGCCGCACGAGGCGACTCAGAAGCTCGCTTTGCTCGTGGTTGAA
GTATCAAACTACGGGTGCTGCTGTATGCGGTGGCGTTTGGAAAAGAAAGA
TATCTCCGTCACATGGCAGGAGAAAACTAACAGATACTTCCCGGTTCTCC
CGTGAATGAAAGGGGTAGGGCGGCTGTACGCGAGGGAGCGTTCTGTCCTT
GTTTTACGATCCTTCTTTACCGTAAGAGCAGAGGGAAGGTGTTTGATTAT
ACATCTTACTTTTTAACCGTTGGCTTATCCAATACGGTGCAACTGCGGTT
GTTGGGAAAATATTCAGTGATCTTGGAACTCCTAGAGTCTCTTTTGTGTT
GCCTAACTCGGCGCTTCTTCTTTCTTCTTTTCTTTTCGGATGTAATAAAG
ACGTGTTTTTCAACCTCCGTGTGTCAAGCCTTACGGAACCAGGCCTATAC
AAACAGAAGGTGTGGACATGTGTACCGTGAAGGCAGACCAAACGGCGTTT
TGGAGGGCCCCCGGCGCGGGGCAGCTTTCTCTCCTTGCTTTACGATCCTC
TTTACTGTATCAGCAAAGGAAGGGTGCGGACATGTGTGTCGTGAAGGCGT
ACCAAATGGTTTTTCGAGGGCGATGAATGCGGTCCTTCGCACGGTAGGCC
GGCGACTTGATTGGCTGTCTACGAAAAGTTGTCCGCGCTGCTTCCCACGG
CTGAGTGACGTCAAAAGCCGACCCCCTCCCTCTCGAGACGCCATAAGATC
CCGCAAAGGAACAAATGATGACTGATGAAGGCACGAGCATTTTACTAACC
ATGTCCGTTTCGCGAACCTTATCCGTTTCGCGAGCCAATGCATTTCACGA
GGCATAACCTATTTCACGAACCATATCCAATGTACGGACCATAGCACTTC
TCGAAACATAGCCATTTCGAAAACTGAGCCATAGTCATTTCGGTAAACAT
TGTCATAACGGTAACCAAACCCATTTCAGTCATCACTTGCTTTGCACCAA
CCGTAGCGATTTCGCTAGCCTTAAGCCATTTCACGAACCATGATCATTTC
ACTAATCATACCATTTCATGGACCACAGTCATTTCATTTACCATACCACA
TTGTTTTCACTAACCATGTCCATTTCGCCAAAGGCCGTCAGTATTTCATT
TGCCAGCCGCATTCCACTCACCGCAGCTATTTTATTTATGAGCAATGTCA
CTCTACGACTTTTGTAGCCATGTCCGTTTCACTCCCTTGTAAATATAGCC
ATTCCAATAACCACGACCAACGATTCCACTAACCACGACAAACCATTCCA
CTAACCATGACCAACCATTCCACGAGAGCTAATCATGACCTACCGTTCCA
CTAGAGCTAACCATGACCCTTTCATAAACCATAGCAGCTGGCTAGTAGCT
TAAAGTTTAACCCCGTTGACTCTTAATGCGGGTTCAAGGCTCGTCGAGTT
GAATTCTTGTATTCTGGTTTTCGTACGGGAAAAGCATCATTAAAAGTAGG
CGAAGGTCAACCATTGGTTTGACAATGTGTCGAGAGTGCTGAACTTGCAT
CGCGATAAAAACTCGTAAGGTGTGAACAGGGGAGAGATGGGTAGCTCTAG
ATCCGCAGTGACCACGGGTGGGACGGCAACGTTGCGGTGTGTGGGTTTGT
TCACCTAATACATAGCTAGCGCAGTGATTGGGTCCATCGTCAGAACTCTG
ACGAAAAACAAAAACAAAAAAAACTCAAGCTCCCCCCCACATCTTACATG
CATCCCACCTGTTAATCCCGGCCCGCACCTTTCGTTGCCGATCCCACTGC
CAACCCCGCCGCAGATGATCGACATCATGGAGGTGGTTTACAGGGGCGCG
CGAAAGGGTCGAGGTCTCGTGGTCTCCCCCAAGGACTACTCCACCAAGTA
CAAGTATTAAAATCTGCTGGCGGGGGGATGGAgggGGGGCTTGGGGGATG
AGGGGGCGCACCTCTCTTCTCCAGGCACGGAGGACAAGGTGGCGTGCCAG
GAGGCATTTCCGGGAGGCGCGGTTTTGACCGCCTGAAAAAAAAAGAAAAA
AAAACTCAATTTTCTCTGTTTTTGAATATGCCTCTGCAGGATACACGACA
GCTCCTTCGTTCTCGCGCAGCTCCCAAGACCTCCAAAGCCTAGAGGCTAC
CCTCTGCGCGTGTTTTTCTTCTTCTTCTTTAGTCGTCGGGTGGCTGAGAG
GGTGGTGTGTTTTGTCTTGGCATGAATGTAAAGCTATGTAAATTTATACA
TGCCTAGTGTTACACAGTAGAAGTGTTGAGCTTGCCCGAAGGCGTTTTTT
TGGGGGCGGAGGGGGCGGATGGAGTCAATCTGGTTCTATAATAATCTTAT
GTTTCTATAACACGAGGTAAAACACAAGATCAGGCCGAACTCTGTATCGT
TTCGTGCTAAAACCAACCTCGCGGAGGTGTACGATACACGGTTCGGCAAA
ACGCTAGCGTTTTATTTCCCAAAGAGGACCGACTTTTCACTTCCCTTCCC
CGCTGGTCATGAACTTTATACTATGCACCGGCTGCGGAACAGCTGCGGGC
GGCACCGGGAGCATTGTTACCCTCTCATCCGGCCGCATCTATCTCTAAAA
ATAAAATCAACGAAATAAATGACTTGTGTCTCTCTGCTCACTCTGCGAAT
CAACGCACATGTAGGCGTACATTCCCCGCTCAGTATTCCCCCTCGGACTT
GTTCTCTATCGCGCATCAGTGTTACTGCTGGATTAGTG back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig11:230821..243108+ >mRNA_A-nodosum_M_contig11.20.3 ID=mRNA_A-nodosum_M_contig11.20.3|Name=mRNA_A-nodosum_M_contig11.20.3|organism=Ascophyllum nodosum dioecious|type=CDS|length=486bp|location=Sequence derived from alignment at A-nodosum_M_contig11:230821..243108+ (Ascophyllum nodosum dioecious) ATGTCGTACTTGCTACCCCACTTGAGGTCCGGCTGGGCGGTTGACCAGGC AATCATCAACGAGGAGGATAGGGTTGTCTGCCTCAGGTTCGGCCACGACC ACGATATGACATGCATGCAGATGGACGAGGTCCTCGCCGGCATCGCGGAG GAGGTGAAAAACTTCTGCGCCATCTACGTGGTGGACGTCACCGAGGTGCC GGACTTCAACGACATGTACGAGCTGTACGACCCCTGCACGGTGATGTTCT TCTTCCGCAACAAGCACATCATGATCGACCTGGGCACGGGCAACAACAAC AAGATCTCCTGGGCGTTCAACAACAAGCAAGAGGCGAGAACGCATTTCAA TTACGAAACCCCAATCCTGGCTTACGCACTTGATGGTACTATGATCGACA TCATGGAGGTGGTTTACAGGGGCGCGCGAAAGGGTCGAGGTCTCGTGGTC TCCCCCAAGGACTACTCCACCAAGTACAAGTATTAA back to top
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