prot_A-nodosum_M_contig11.20.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.20.3
Unique Nameprot_A-nodosum_M_contig11.20.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length162
Homology
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 4.500e-95
Identity = 137/161 (85.09%), Postives = 142/161 (88.20%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHLR+GWAVDQAIINEE+RVVCLRFGHDHD+TCMQMDEVLAGIAE+VKNFCAIYVVDV+EVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQE                   MIDIMEVVYRGARKGRGLVVSPKDYSTKYKY
Sbjct:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQE-------------------MIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 142          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM)

HSP 1 Score: 255 bits (652), Expect = 2.570e-85
Identity = 121/161 (75.16%), Postives = 133/161 (82.61%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHL SGWAVDQAI+NE DRVV +RFGHDHD TCMQMDEVL G+AE+VKNF AIYVVD+TEVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK E                   M+DI+E VYRGARKGRGLV++PKDYSTKY+Y
Sbjct:    1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSE-------------------MVDIIETVYRGARKGRGLVIAPKDYSTKYRY 142          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.460e-83
Identity = 121/161 (75.16%), Postives = 134/161 (83.23%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            M+YLL HL SGWAVDQAI+ EE+R V +RFGHD+D TCMQMDEVL+GIAE+VKNF  IYVVD+++VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQE                   MIDI+EVVYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQE-------------------MIDIIEVVYRGARKGRGLVVSPKDYSTKYRY 142          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.680e-83
Identity = 121/161 (75.16%), Postives = 133/161 (82.61%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHL SGWAVDQAI+NE DRVV +RFGHDHD TCMQMDEVL+G+AE+VKNF  +YVVD+T+VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK E                   MIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:   87 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLE-------------------MIDIIETVYRGARKGRGLVISPKDYSTKYRY 228          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI)

HSP 1 Score: 250 bits (638), Expect = 3.500e-83
Identity = 120/161 (74.53%), Postives = 132/161 (81.99%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHL SGWAVDQAI+NEEDRVV +RFGHD D TCMQMDE+L  IA++VKNF  IY VD+TEVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQE                   MIDI+EVV+RGARKGRGLV+SPKDYSTKY+Y
Sbjct:    1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQE-------------------MIDIIEVVFRGARKGRGLVISPKDYSTKYRY 142          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA)

HSP 1 Score: 250 bits (638), Expect = 5.420e-83
Identity = 119/161 (73.91%), Postives = 134/161 (83.23%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHLRSGWAVDQAI+NEE +VV +RFGHD D TCM+MDE+L GIA++VKNFC+IY+VD++EVPDF  MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQE                   MIDI+E VYRGARKGRGLV+SPKDYSTKY+Y
Sbjct:   14 MSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQE-------------------MIDIIETVYRGARKGRGLVISPKDYSTKYRY 155          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 6.000e-82
Identity = 118/161 (73.29%), Postives = 132/161 (81.99%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHL++GW+VDQAI+NEEDRVV  RFGHD+D  CMQMDEVL GI ++VKNF  IYV+D++EVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQE                   MIDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQE-------------------MIDIIETVYRGARKGRGLVVSPKDYSTKYRY 143          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A7S3SL24_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SL24_9SPIT)

HSP 1 Score: 243 bits (620), Expect = 7.930e-80
Identity = 118/161 (73.29%), Postives = 131/161 (81.37%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHL SGWAVDQAII+EE RVVC+RFGHD+D  CMQMDEVL  IAE VKN+C IY+VD+TEVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WA ++KQE                   +IDI+E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:   42 MSYLLPHLNSGWAVDQAIISEEARVVCIRFGHDYDPICMQMDEVLYSIAELVKNYCVIYLVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAIHDKQE-------------------VIDIIETVYRGARKGRGLVVSPKDYSTKYRY 183          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA)

HSP 1 Score: 241 bits (615), Expect = 1.120e-79
Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYL+PHL +GWAVDQAI++EEDRVV LRFGHD+D TCMQMDEVL GIAE VKN+  IY+VD++EVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA  +KQE                   MIDI+E +YRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQE-------------------MIDIVETIYRGARKGRGLVVSPKDYSTKYRY 142          
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Match: A0A6S8YQP1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8YQP1_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.120e-79
Identity = 115/161 (71.43%), Postives = 130/161 (80.75%), Query Frame = 0
Query:    1 MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAEEVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVVSPKDYSTKYKY 161
            MSYLLPHLR+GWAVDQAI+NEEDRVV +RFGHD+D  CMQMDE L+ IA++VKNFC +Y+VD+TEVPDFN MYELYDPCTVM FFRNKHIMIDLGTGNNNKI+WA  N QE                   +ID++E VYRGARKGRGLVVSPKDYSTKY+Y
Sbjct:    1 MSYLLPHLRTGWAVDQAILNEEDRVVVVRFGHDYDPVCMQMDEALSKIADKVKNFCVVYLVDITEVPDFNTMYELYDPCTVMTFFRNKHIMIDLGTGNNNKINWALTNTQE-------------------LIDLIETVYRGARKGRGLVVSPKDYSTKYRY 142          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.20.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4B1_ECTSI4.500e-9585.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H3G9C0_PHYRM2.570e-8575.16Uncharacterized protein n=32 Tax=Oomycota TaxID=47... [more]
A0A835Z237_9STRA2.460e-8375.16Mitosis protein DIM1-domain-containing protein n=1... [more]
A0A5D6XYK2_9STRA2.680e-8375.16Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A812WHX6_SYMMI3.500e-8374.53YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A7S3HQX3_9STRA5.420e-8373.91Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2HED9_9STRA6.000e-8273.29Hypothetical protein n=3 Tax=Dictyochophyceae TaxI... [more]
A0A7S3SL24_9SPIT7.930e-8073.29Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A0M0JAP0_9EUKA1.120e-7972.67Thioredoxin-like protein 4a n=2 Tax=Prymnesiales T... [more]
A0A6S8YQP1_9STRA1.120e-7971.43Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004123Dim1 familySMARTSM01410DIM1_2coord: 4..155
e-value: 8.3E-85
score: 297.7
IPR004123Dim1 familyPIRSFPIRSF017199Dim1coord: 114..161
e-value: 4.0E-10
score: 36.8
coord: 1..114
e-value: 1.8E-57
score: 190.3
IPR004123Dim1 familyPFAMPF02966DIM1coord: 4..111
e-value: 1.2E-50
score: 170.7
coord: 128..155
e-value: 7.9E-7
score: 28.9
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 131..161
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 1..111
IPR004123Dim1 familyCDDcd02954DIM1coord: 10..142
e-value: 7.15026E-68
score: 199.829
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 116..161
e-value: 1.3E-10
score: 43.1
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..115
e-value: 3.0E-56
score: 190.9
NoneNo IPR availablePIRSRPIRSR017199-1PIRSR017199-1coord: 1..111
e-value: 4.6E-51
score: 168.8
NoneNo IPR availablePANTHERPTHR12052:SF9SUBFAMILY NOT NAMEDcoord: 1..111
NoneNo IPR availablePANTHERPTHR12052:SF9SUBFAMILY NOT NAMEDcoord: 131..161
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 4..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:231086..242280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.20.3mRNA_A-nodosum_M_contig11.20.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 230821..243108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.20.3 ID=prot_A-nodosum_M_contig11.20.3|Name=mRNA_A-nodosum_M_contig11.20.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=162bp
MSYLLPHLRSGWAVDQAIINEEDRVVCLRFGHDHDMTCMQMDEVLAGIAE
EVKNFCAIYVVDVTEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNN
KISWAFNNKQEARTHFNYETPILAYALDGTMIDIMEVVYRGARKGRGLVV
SPKDYSTKYKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004123Dim1
IPR036249Thioredoxin-like_sf