mRNA_A-nodosum_M_contig10995.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5K832_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K832_9PHAE) HSP 1 Score: 175 bits (444), Expect = 3.650e-45 Identity = 118/308 (38.31%), Postives = 157/308 (50.97%), Query Frame = 1
Query: 451 LKGEWKGVVLVATTKDTSNTLVL-----------------------------VAFAICGKENASNYSFLPTERKKNPHMAALLSSTGTTIYSDEHQGISAALKTHASRCIHRLCLHHLIKNLPGPGIGSNVNGWLYHAARDPTQRQCMNLLTTFVKPTKPLAFDSPLVKRSPSQ---WTHWAQPPDTVIMDQVTSNGAESTMNMIG-HDARKLPPLGLMISMVENTARKFAGRTHLGEGAYNNVTPFASKLFETEREASKGLVASSTGNGYFSVQNMNIVSQTPRGNRVLLLL--DLSPPKWTCTCGY 1269
LKG+W G++LVAT+KD LV VA +IC KEN NYS+ K N MA +L+S TT+++D+H+ A+ HA + R CL H IK LP G V WLYHAAR PT+ + M+ T VKPTKP A+ + L P + WTH A P DT I V+SN AE M M+G ++ L + +++ TA + A R L A TPFA+K FE +R S L +S+TGNG F+V+ + + GNRV L D + TCTCGY
Sbjct: 73 LKGDWNGMMLVATSKDADTKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALP-EAPGQTVTHWLYHAARAPTRTKFMD---TKVKPTKPKAYAALLDPNKPHELVKWTHHAGPTDTAIGGVVSSNAAEQNMVMVGLQRGEEVAALHMAQHILDKTASRMAERAELVNSASQRFTPFAAKEFEAQRAKSSNLHSSATGNGNFTVRKLG----SNYGNRVGLEFGTDGVVTRMTCTCGY 372
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5K7Q3_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q3_9PHAE) HSP 1 Score: 134 bits (337), Expect = 5.490e-31 Identity = 99/300 (33.00%), Postives = 149/300 (49.67%), Query Frame = 1
Query: 451 LKGEWKGVVLVATTKDTSNTLVLVAFAICGKENASNYSFLPTERKKNPHMAALLSSTGTTIYSDEHQGISAALKTHASRCIHRLCLHHLI--KNLPGPGIGSNVNGWLYHAARDPTQRQCMNLLTTFVKPTKPLAFDSP-----LVKRSPSQWTHWAQPPDTVIMDQVTSNGAESTMNMIGHDARKLPPLGLMISMVENTARKFAGRTHLGEGAYNNVTPFASKLFETEREAS-KGLVASSTGNGYFSVQNMNIVSQTPRGNRVLLLLDLSPPKW---TCTCGYVPRYLSPCRERIAVGK 1317
LKG WKGV+ V D++N ++ + I KE+A+N+ FL + +N HM LLSS T + D H+G AAL+ + R C+ LI KN+ G S + +Y AA PT+ F + +P+ D P L+K +WTH A P + V + TSN AEST++++GH R++ P I + E TA + A L + + + PFA+K + ER S S G G + VQ + + GNRV ++L + K CTC R+ C++ +AV K
Sbjct: 33 LKGSWKGVMYVLCMHDSNNKIIHFSTVIADKEHATNFKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVVPQAPWRACVRQLITNKNMKAMGHVSLLVA-VYRAAVMPTK-------ALFEEAIEPVKKDFPANYKLLMKDDLDKWTHHATPSNLVNLKMSTSNSAESTISVVGHQKREMDPYHFHIEIAEKTAEQLATNAELLKDCHAILVPFAAKFMKDERLLSLSNKHVKSMGLGTYLVQ---VHGKNQYGNRVTIVLPDTEGKGGRVECTCRVPTRFHLLCQDALAVLK 321
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5JAG6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG6_9PHAE) HSP 1 Score: 130 bits (326), Expect = 5.650e-29 Identity = 88/228 (38.60%), Postives = 126/228 (55.26%), Query Frame = 1
Query: 451 LKGEWKGVVLVATTKDTSNTLVLVAFAICGKENASNYSFLPTERKKNPHMAALLSSTGTTIYSDEHQGISAALKTHASRCIHRLCLHHLIKNLPGPGIGSNVNGWLYHAARDPTQRQCMNLLTTFVKPTKPLAFDSPLVKRSPSQWTHWAQPPDTVIMDQVTSNGAESTMNMIGHDARKLPPLGLMISMVENTARKFAGRTHLGEGAYNNVTPFASKLFETEREASKG 1134
LKGEW G+VL T KD +N ++ VA I KE+ S Y L KKNP M LL + T ++D+H+G + AL+ A HR CL H+I N+ IGS L + +C +L T + P++ S + R S T PDT + D VT+N +E T + +G +ARKLPPL LM S++ +TA+KFA + LG G + TP+++ FE +R+ S G
Sbjct: 178 LKGEWNGMVLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTIFFTDQHKGATCALRGEAPLAQHRYCLRHIILNIEK--IGSVQAPLLVMHS----PMRCDSLGTFYRASLAPMSR-SLTIGRGMSGLTLVG--PDTALQDVVTNNLSEPTNSAVGVEARKLPPLELMRSVLADTAKKFAHSSTLGNGTW---TPYSAATFEDQRKKSAG 393
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5K5N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N8_9PHAE) HSP 1 Score: 122 bits (305), Expect = 7.820e-27 Identity = 82/217 (37.79%), Postives = 119/217 (54.84%), Query Frame = 1
Query: 985 KLPPLGLMISMVENTARKFAGRTHLGEGAYNNVTPFASKLFETEREASKGLVASSTGNGYFSVQNMNIVSQTPRGNRVLLLLDLSPPKWTCTCGYVPRYLSPCRERIAVGKELGRMDDVMALVHSAYRLSNYHQLYADDRRRVVLPVLSLIDEDTTLLPPHPVGGQAGRPK--KGKDASNRIASNREKAASAVHNVPLSQLPPTATAT--AGGLSQG 1623
KLPP +M S++ +TA+KFA R LG GA+ TP+A+ FE +R+ S G+ ++ G + +W+CTCG+ R+ PC + IA+ + +MD VMAL+H AYRL + + Y D+ +++LPV S ++ED TLLPP V GQAG PK G I +K AS+ N +S+L PTA+ + A LSQG
Sbjct: 77 KLPPFEMMRSILADTAKKFAHRATLGNGAW---TPYAAATFEDQRKKSAGV----------------LLRWGEPGQKT---------EWSCTCGFPARFHIPCCDVIALARSEDKMDVVMALMHPAYRLQYHRRTYGDNAYQIMLPVPSTLEEDDTLLPPFWVAGQAGAPKTKSGPKKYKMIPGRGDKNASSSFNRRVSELGPTASGSTAAPSLSQG 265
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5K869_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K869_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.170e-19 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 787 PTQRQCMNLLTTFVKPTKPLAFDSPLVKRSPSQWTHWAQPPDTVIMDQVTSNGAESTMNMIGHDARKLPPLGLMISMVENTARKFAGRTHLGEGAYNNVTPFASKLFETEREASKG 1134
PT++QC ++L P+KP A+ + +W H PPDT + D VT+N +E T + +G +ARKLPPL LM S++ +TA+KFA R++LG G + TP+A FE +R+ S G
Sbjct: 13 PTKKQCEDILKQHALPSKPRAYVQIIDDWKRHEWAHSGGPPDTALQDVVTNNLSEQTNSAVGVEARKLPPLELMRSILADTAKKFANRSNLGNGTW---TPYAVATFEEQRKKSAG 125
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5JCH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH3_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 3.530e-13 Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 1318 ELGRMDDVMALVHSAYRLSNYHQLYADDRRRVVLPVLSLIDEDTTLLPPHPVGGQAGRPKK-GKDASNRIASNREKAASAVHNVPLSQLPPTATAT--AGGLSQG 1623
E +MD VM L++ YRL + Q Y DD +V+LPV S + ED TLLPP PV GQ G PKK G IA R+K AS+ N +S+L P A+ T A LSQG
Sbjct: 38 EEDKMDAVMTLMNPTYRLKYHRQTYGDDAYQVMLPVASTLKEDDTLLPPLPVDGQVGAPKKLGPKKFKGIAGRRDKYASSSFNTRVSELGPAASGTTAAPSLSQG 142
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: UPI0009049EFC (protein FAR1-RELATED SEQUENCE 8-like n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009049EFC) HSP 1 Score: 79.3 bits (194), Expect = 6.960e-13 Identity = 62/215 (28.84%), Postives = 102/215 (47.44%), Query Frame = 1
Query: 451 LKGEWKGVVLVATTKDTSNTLVLVAFAICGKENASNYSFLPTERKKNPHMAALLSSTGTTIYSDEHQGISAALKTHASRCIHRLCLHHLIKNLPGPGIGSNVNGWLYHAARDPTQRQCMNLLTTFVKPTKPLAFDSPLVKRSPSQWTHWAQPPDTVIMDQVTSNGAESTMNMIGHDARKLPPLGLMISMVENTARKFAGRTHLGEGAYNNVTPFA 1095
LK +++GV+LVA TKD +N + +AF + KEN +Y + E +K A+ SD H+ I+ + C H +C++HL KNL + + V AAR Q + + ++ K F+ L++ P +W P D +T+N ES MN + +R+LP L +M + E F R L EG + +++ +A
Sbjct: 29 LKNKYRGVLLVAVTKDANNHIFPIAFGVVDKENNESYEWYFRELRK-----AIGIRNDLMFLSDRHKAIANGIAKVFPECYHGICIYHLEKNLKQRRVRNTVINLFQSAARVYLQSEFDDFMSQIAAVDKK-TFNY-LMEEPPGRWARSHCPRRRY--DMLTTNIVES-MNNVLRRSRELPILTMMDFIQEKLQSWFYERRTLAEGIFRDISNWA 233
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5KFD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD6_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 8.850e-13 Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 1327 RMDDVMALVHSAYRLSNYHQLYADDRRRVVLPVLSLIDEDTTLLPPHPVGGQAGRPKK-GKDASNRIASNREKAASAVHNVPLSQLPPTATAT--AGGLSQG 1623
+MD VM L++ AY L+ + Q Y DD +V+LPV S ++E TLLPP PV GQAG PKK G RIA +K AS+ N +S+L P A+ T A LSQG
Sbjct: 54 KMDAVMTLMNPAYHLNYHRQTYGDDAYQVMLPVASTLEEVDTLLPPLPVDGQAGAPKKLGPKKFKRIAGRGDKYASSSFNTRVSELGPAASGTTAAPSLSQG 155
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5JDY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDY3_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 1.000e-12 Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 1255 CTCGYVPRYLSPCRERIAV----------GKELGRMDDVMALVHSAYRLSNYH-QLYADDRRRVVLPVLSLIDEDTTLLPPHPVGGQAGRPKK-GKDASNRIASNREKAASAVHNVPLSQLPPTATAT--AGGLSQG 1623
CTCG+ R+ PC E IAV G + GR D A S YH Q YADD +V+LPV S ++ED TLLPP PV GQAG PKK G RIA +K AS+ N +S+L P A+ T A LSQG
Sbjct: 157 CTCGFPARFQIPCCEVIAVARGGKILCFRGGQDGRCHDPDAPGLSP----QYHRQTYADDAYQVMLPVPSTLEEDDTLLPPLPVDGQAGAPKKLGPKKFKRIAGRGDKYASSSFNTRVSELGPAASGTTAAPSLSQG 289
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Match: A0A6H5JZS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZS0_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 1.030e-12 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1306 AVGKELGRMDDVMALVHSAYRLSNYHQLYADDRRRVVLPVLSLIDEDTTLLPPHPVGGQAGRPKK-GKDASNRIASNREKAASAVHNVPLSQLPPTATAT--AGGLSQG 1623
++ E +MD VM L++ AY L+ + Q Y DD +V+LPV S ++E TLLPP PV GQAG PKK G RIA +K AS+ N +S+L P A+ T A LSQG
Sbjct: 64 SIHAEEDKMDAVMTLMNPAYHLNYHSQNYGDDAYQVMLPVASTLEEVDTLLPPLPVDGQAGAPKKLGPKKFKRIAGRGDKFASSSFNTRVSELGPAASGTTAAPSLSQG 172 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10995.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig10995.2.1 >prot_A-nodosum_M_contig10995.2.1 ID=prot_A-nodosum_M_contig10995.2.1|Name=mRNA_A-nodosum_M_contig10995.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=361bp MAALLSSTGTTIYSDEHQGISAALKTHASRCIHRLCLHHLIKNLPGPGIGback to top mRNA from alignment at A-nodosum_M_contig10995:5246..11519+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig10995.2.1 ID=mRNA_A-nodosum_M_contig10995.2.1|Name=mRNA_A-nodosum_M_contig10995.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6274bp|location=Sequence derived from alignment at A-nodosum_M_contig10995:5246..11519+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig10995:5246..11519+ >mRNA_A-nodosum_M_contig10995.2.1 ID=mRNA_A-nodosum_M_contig10995.2.1|Name=mRNA_A-nodosum_M_contig10995.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1083bp|location=Sequence derived from alignment at A-nodosum_M_contig10995:5246..11519+ (Ascophyllum nodosum dioecious)back to top |