prot_A-nodosum_M_contig1097.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1097.5.1
Unique Nameprot_A-nodosum_M_contig1097.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length103
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A7I8J9K8_SPIIN (Histone H4 n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J9K8_SPIIN)

HSP 1 Score: 184 bits (468), Expect = 1.550e-58
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:    1 VRTRKGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            VR+ KGREG+G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   25 VRSGKGREGAGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 126
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A2J6LKC2_LACSA (Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LKC2_LACSA)

HSP 1 Score: 183 bits (464), Expect = 4.880e-57
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 0 
Query:    1 VRTRKGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            VRT KGR+G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   89 VRTWKGRKGFGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 190
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A671WNM0_SPAAU (Histone H4 n=2 Tax=Sparus aurata TaxID=8175 RepID=A0A671WNM0_SPAAU)

HSP 1 Score: 178 bits (452), Expect = 2.060e-56
Identity = 91/101 (90.10%), Postives = 95/101 (94.06%), Query Frame = 0 
Query:    2 RTRKGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            R RKG +G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 RQRKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: UPI001BE4C7AC (histone H4-like n=1 Tax=Anopheles merus TaxID=30066 RepID=UPI001BE4C7AC)

HSP 1 Score: 179 bits (455), Expect = 2.740e-56
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0 
Query:    4 RKGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            RKGR+G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   47 RKGRKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 145
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.160e-56
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0 
Query:    5 KGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            KG +G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 177 bits (450), Expect = 4.160e-56
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0 
Query:    5 KGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            KG +G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 177 bits (449), Expect = 5.910e-56
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0 
Query:    5 KGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            KG +G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 177 bits (450), Expect = 8.350e-56
Identity = 91/98 (92.86%), Postives = 93/98 (94.90%), Query Frame = 0 
Query:    5 KGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            KG +G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   28 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A194R5I7_PAPMA (Histone H4 n=2 Tax=Endopterygota TaxID=33392 RepID=A0A194R5I7_PAPMA)

HSP 1 Score: 177 bits (448), Expect = 8.400e-56
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0 
Query:    5 KGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            KG EG G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGEGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Match: A0A3P9B440_9CICH (Histone H4 n=2 Tax=Bilateria TaxID=33213 RepID=A0A3P9B440_9CICH)

HSP 1 Score: 177 bits (448), Expect = 8.670e-56
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 0 
Query:    4 RKGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 102
            RKG +G G+G  KRHRKVLRDNI GITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 RKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 104
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1097.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7I8J9K8_SPIIN1.550e-5891.18Histone H4 n=1 Tax=Spirodela intermedia TaxID=5160... [more]
A0A2J6LKC2_LACSA4.880e-5791.18Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID... [more]
A0A671WNM0_SPAAU2.060e-5690.10Histone H4 n=2 Tax=Sparus aurata TaxID=8175 RepID=... [more]
UPI001BE4C7AC2.740e-5691.92histone H4-like n=1 Tax=Anopheles merus TaxID=3006... [more]
A0A024G0M5_9STRA4.160e-5692.86Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
F0W2L9_9STRA4.160e-5692.86Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID... [more]
H4_SOLLC5.910e-5691.84Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
A0A3L6V663_9STRA8.350e-5692.86Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A194R5I7_PAPMA8.400e-5691.84Histone H4 n=2 Tax=Endopterygota TaxID=33392 RepID... [more]
A0A3P9B440_9CICH8.670e-5690.91Histone H4 n=2 Tax=Bilateria TaxID=33213 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 39..59
score: 93.56
coord: 88..99
score: 97.79
coord: 61..75
score: 91.96
coord: 19..38
score: 89.12
coord: 4..15
score: 40.2
coord: 76..88
score: 90.05
IPR001951Histone H4SMARTSM00417h44coord: 15..89
e-value: 8.4E-29
score: 111.7
IPR001951Histone H4CDDcd00076H4coord: 16..100
e-value: 2.62771E-43
score: 134.166
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 38..95
e-value: 7.8E-8
score: 32.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..102
e-value: 7.6E-53
score: 178.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..101
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 5..102
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 5..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1097contigA-nodosum_M_contig1097:171540..171848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1097.5.1mRNA_A-nodosum_M_contig1097.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1097 171540..171848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1097.5.1 ID=prot_A-nodosum_M_contig1097.5.1|Name=mRNA_A-nodosum_M_contig1097.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=103bp
VRTRKGREGSGQGWCKRHRKVLRDNIHGITKPAIRRLARRGGVKRISGLI
YEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGF
GG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold