mRNA_A-nodosum_M_contig1096.28.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: D7FP40_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP40_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 3.630e-136 Identity = 219/333 (65.77%), Postives = 258/333 (77.48%), Query Frame = 1
Query: 925 SQLPLLEAFAGGGLRQAQQHHATVG-TVENSDLSEHGISFGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKA-ERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVY-SAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLRGLWGCNRLGPGGLLSSHRRGGGVAVLA 1914
S+LPLL++ +Q Q ++ + E++DL EHG+SFGVS LKG RPYMEDEFKVIP+LEL G+S F + R +E THFFG+FDGHAGGRCS+ L L QTVSREPDF +L AVH+GFL+AN EFLRK +GSTA+TAFVRGR LV+GNVGDSRAVLCS GRA+P+SSDHKPNKPEERRRI ALGG VV SFGVPRVNGILAVSRAFGDRN+K ++AEP+VRER LE DDFLVLATDGLWDVMT+QE CN+VY SAPD+GPQ C+E+LT A+RKGS+DNT+AMVVDLRGLW + + +R G VAV A
Sbjct: 52 SRLPLLDSTPTLPQQQQTQRQRSMHVSAESNDLFEHGLSFGVSTLKGHRPYMEDEFKVIPNLELNGGASDLFRREGRDMEPTHFFGMFDGHAGGRCSKALTHILGQTVSREPDFSLELQSAVHKGFLRANAEFLRKLLSSSLDREGSTAVTAFVRGRRLVVGNVGDSRAVLCSD-GRALPMSSDHKPNKPEERRRIQALGGRVVYSFGVPRVNGILAVSRAFGDRNMKGAVNAEPDVRERSLERHDDFLVLATDGLWDVMTSQEVCNIVYNSAPDVGPQGCSELLTTMALRKGSLDNTSAMVVDLRGLWDVDEG------AQPKRAGSVAVAA 377
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A835YVD1_9STRA (Phosphatase 2C-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD1_9STRA) HSP 1 Score: 321 bits (823), Expect = 1.890e-101 Identity = 166/292 (56.85%), Postives = 211/292 (72.26%), Query Frame = 1
Query: 1018 LSEHGISFGVSALKGRRPYMEDEFKVIPSLE---------LIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFM--SKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSA---PDLGPQACAEMLTATAIRKGSMDNTTAMVVDLRGLWGCN 1851
L++ GI+ GV ++KG+RPYMEDE++V+ LE L +G G G + T FFGVFDGHAGGRCSR L QTLAQ V+R+P+F L A+ RGF +AN +FLRKAER ANDGSTA+TAF+RGR L + NVGDSRAVL GR V LS DHKPN+PEERRRI A GG V+ SFGVPRVNGILAVSRAFGDRN++ I+AEPE++ R LE GD FL+LATDG+WDV+++ E + + + PQ C+ +L + A+++GS+DN TA+VVDLRG+WG +
Sbjct: 1 LAQQGIAVGVCSVKGKRPYMEDEYRVLAHLETTPGAGAWGLDEGGDGRGAGGGGGLR-TAFFGVFDGHAGGRCSRALTQTLAQCVARDPEFQRGGDLSTAIARGFARANADFLRKAERFNANDGSTAVTAFLRGRTLTVANVGDSRAVLVCAGGRVVALSFDHKPNRPEERRRIQACGGRVIFSFGVPRVNGILAVSRAFGDRNMRGAINAEPELQVRNLEVGDKFLILATDGVWDVVSSAECAAMAHQCVLQQGMTPQQCSAVLVSVAMQRGSLDNATALVVDLRGIWGAS 291
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A7S2XYD4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYD4_9STRA) HSP 1 Score: 278 bits (712), Expect = 3.700e-86 Identity = 139/241 (57.68%), Postives = 177/241 (73.44%), Query Frame = 1
Query: 1054 LKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSA-PDLGPQACAEMLT 1773
+KGRRPYMEDE +VIP +E ++G+S G +T F VFDGHAG RCS+ ++Q+L V+REPDF L A +G +KAN E++R+AER DGST I AF+RGR LV+ NVGDSRAVLC +A+P+S DHKPN+PEERRRI A GGHV S GV RVNG+LAVSRAFGD+N++ I + E++E+ L+ D FL+L +DGLWD++ NQEACN+V A P+LGPQ CAEMLT
Sbjct: 1 VKGRRPYMEDEHRVIPRMEALEGAS---TGTGGGGGTTQLFAVFDGHAGARCSKAVSQSLGPCVAREPDFGPDLAAAAVKGCVKANAEWMRRAERYNMCDGSTGIMAFLRGRRLVVANVGDSRAVLCGAGNKAIPMSRDHKPNRPEERRRIAAAGGHVTVSMGVHRVNGVLAVSRAFGDKNLRQTIRPDAEIKEKDLDETDSFLILGSDGLWDMIANQEACNIVARALPNLGPQGCAEMLT 238
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A7S3GX32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GX32_9STRA) HSP 1 Score: 240 bits (612), Expect = 3.590e-69 Identity = 126/268 (47.01%), Postives = 176/268 (65.67%), Query Frame = 1
Query: 1030 GISFGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSA-PDLGPQACAEMLTATAIRKGSMDNTTAMVVDL 1830
G+ GV + +G+RPY EDE+ + P L + G+ THF+G+FDGHAGGRCS +A +L ++ +P F + LPQA+ R F N +FL+ AE++ +DGST ITA VR +++ NVGD RA++ SG GR + +S D KP PEE++RI ALGG VV GV RVN +LAVSRAFG+R ++S I + E+ +R L DD+LV+A+DGLWDV+ N++ C+V YS PQ+ AE L A+++GSMDN T +VV L
Sbjct: 56 GLISGVCSQQGKRPYQEDEYAIRPYL-----NQASPPGEQDTNIETHFYGLFDGHAGGRCSNYVAGSLPNVLAEDPSFFTNLPQALKRSFHTTNEQFLKVAEKMKYHDGSTGITAVVRDSKVLVANVGDCRALIISG-GRPIQMSIDQKPTNPEEQKRITALGGTVVYCMGVARVNRVLAVSRAFGNRTLRSVIRPDAEMMQRELTKDDDYLVMASDGLWDVLKNKDVCDVCYSPFTQCNPQSIAEELVHAALQRGSMDNVTCIVVRL 317
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A7S0Z2Q6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2Q6_9CRYP) HSP 1 Score: 230 bits (587), Expect = 1.060e-65 Identity = 137/297 (46.13%), Postives = 178/297 (59.93%), Query Frame = 1
Query: 1039 FGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLRGLWGCNRLGPGGLLSSHRRGGGVAVLASASPS 1929
FG S ++GRR YMED F ++ G G+ + FFGVFDGH+G + + + L Q V +E D + A+ FL A+ EFL +A R +DGST TA + G+ L + N GDSR +LC G G AVPLS DHKP++P ERRRI A GG V+ G RVNG+LA SR FGD+++K ++SAEPEV R L+ GD+ LVLA+DGLWDVMTN E + P+ P+ A++LT A+R GSMDN TA+VVDLR + N P H R A AS+S S
Sbjct: 60 FGYSLVQGRRDYMEDFFHT----QVDVGKGGEHL--------RSFFGVFDGHSGKKAAAWAKERLQQLVWQELDKGREPKAALRAAFLAADAEFLHRANREFLSDGSTVTTALLIGKDLYVANAGDSRTILCRGDGHAVPLSEDHKPDRPSERRRIVAAGGQVIF-VGCARVNGVLATSRGFGDKDLKKWVSAEPEVTHRTLQQGDEALVLASDGLWDVMTNAEVAAKLRHEPN--PREAAKLLTRVALRLGSMDNVTALVVDLRAV--VNDKSP-----FHSRATSPASAASSSSS 334
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A6T8HF92_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HF92_HEMAN) HSP 1 Score: 220 bits (560), Expect = 1.880e-61 Identity = 127/279 (45.52%), Postives = 171/279 (61.29%), Query Frame = 1
Query: 1006 ENSDLSEHGI-SFGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLRGL 1839
+ + + HG FG S ++GRR YMED V +EL G SG+ + FFGVFDGH+G + + L + +E D + A+ FL A+ EFL +A R +DGST TA + G+ L + N GDSR +LC G V LS DHKP++P ERRRI A GG V+ G RVNG+LA SR FGD+++K ++SAEPE+ R L+ GDD +VLA+DGLWDVMTN E + + P+ + A++LT TA+R GSMDN TA+VVDLR +
Sbjct: 62 DGGESATHGAPGFGYSLVQGRRDYMEDFHFV--QVEL--GKSGEHI--------RSFFGVFDGHSGKKAAAWAKVRLHPLLIQELDKGREPKSALRAAFLAADAEFLHRANREFLSDGSTVTTALLIGKDLYVANAGDSRTILCRADGHGVALSEDHKPDRPSERRRIVAAGGQVIF-VGCARVNGVLATSRGFGDKDLKKWVSAEPEITHRTLQPGDDAIVLASDGLWDVMTNAEVASKLRHEPNA--REAAKLLTRTALRLGSMDNVTALVVDLRSI 325
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: L1IAL1_GUITC (PPM-type phosphatase domain-containing protein n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1IAL1_GUITC) HSP 1 Score: 213 bits (543), Expect = 3.980e-61 Identity = 117/222 (52.70%), Postives = 151/222 (68.02%), Query Frame = 1
Query: 1171 FFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLP-QAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLR 1833
FFGVFDGH+G R S+ LA+ + E D P +A+ F+K + FL++AE+ NDGSTA TA + GR L + N GDSRA+LC G+ A+P+S DHKP++P ER RI GG VV FG RVNGILA SR GDR +K+++ AEPE+R + LE GDDFLV+ATDGLWDVMTN + ++ + QA A+ LTA A++ GSMDN TA+VVDLR
Sbjct: 19 FFGVFDGHSGKRASQFARDQLAKYL--EVDLQQLGPREALQSAFMKTDASFLQRAEKENLNDGSTAATALLVGRELYVANAGDSRAILCCGQS-AIPMSVDHKPDRPSERERIEQAGGTVVY-FGCARVNGILATSRGIGDRELKNWVIAEPEIRYKKLEPGDDFLVMATDGLWDVMTNVQVATIISG--EKNAQAAAKKLTAEALKLGSMDNITALVVDLR 234
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A5D6XLQ1_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLQ1_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.190e-60 Identity = 117/265 (44.15%), Postives = 160/265 (60.38%), Query Frame = 1
Query: 1039 FGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLR 1833
+GV+ ++GRRPYMED + L +GD S F+GVFDGH G + Q + Q V REP F A+ +GFL+ + E+L+ A R + DG+TA+ +G L + + GDSRA+L G+ L+SDHKPN+P+ERRR+ LGG VV +GV RV GILAVSRA GDR +K F+ AEPEV+E D FLV+A+DG+WD +TN++A +V D Q A++L A +GS+DN MV+DLR
Sbjct: 65 YGVAQMQGRRPYMEDRHTAVADL------NGD--------ASQSFYGVFDGHGGDGAANYCVQAMCQNVIREPSFAKDPVTALKKGFLRTDHEYLQIANRKNSEDGTTAVAVLAQGDALYVAHAGDSRAILVHSSGKVTALTSDHKPNRPDERRRVQDLGGSVVF-WGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKELRRTSKDRFLVVASDGVWDTITNEDAAEIVLKHDDA--QDAAKVLMDEAYARGSLDNICVMVIDLR 312
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: A0A8K1CS70_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS70_PYTOL) HSP 1 Score: 212 bits (540), Expect = 1.010e-59 Identity = 115/265 (43.40%), Postives = 158/265 (59.62%), Query Frame = 1
Query: 1039 FGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLR 1833
+GVS ++GRRPYMED + D G A Q F+GVFDGH G + Q + Q V REP F + A+ +GF+K + E+L+ A + + DG+TA+ RG + + + GDSRA+L G+ L+SDHKPN+P+ER+RI LGG VV +GV RV GILAVSRA GDR +K F+ AEPEV+E D FL++A+DG+WD ++N +A + D PQ A+ L A +GS+DN MV+DLR
Sbjct: 65 YGVSQMQGRRPYMEDRHT----------AHADLNGDATQS----FYGVFDGHGGDGAANYCVQAMCQNVIREPSFAKQPVNALKKGFVKTDQEYLKIANKRNSEDGTTAVAVLTRGDSIYVAHAGDSRAILVHSSGKVTALTSDHKPNRPDERKRIQELGGSVVF-WGVWRVEGILAVSRAIGDRMLKPFVVAEPEVKEWTRTANDRFLIVASDGVWDTISNDDAAELAMKHDD--PQVAAKHLMEEAYARGSLDNICVMVIDLR 312
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Match: K3W529_GLOUD (PPM-type phosphatase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W529_GLOUD) HSP 1 Score: 211 bits (538), Expect = 1.390e-59 Identity = 117/265 (44.15%), Postives = 160/265 (60.38%), Query Frame = 1
Query: 1039 FGVSALKGRRPYMEDEFKVIPSLELIDGSSGDFMGKARQIESTHFFGVFDGHAGGRCSRELAQTLAQTVSREPDFMSKLPQAVHRGFLKANVEFLRKAERLCANDGSTAITAFVRGRCLVIGNVGDSRAVLCSGRGRAVPLSSDHKPNKPEERRRIHALGGHVVSSFGVPRVNGILAVSRAFGDRNIKSFISAEPEVRERLLEYGDDFLVLATDGLWDVMTNQEACNVVYSAPDLGPQACAEMLTATAIRKGSMDNTTAMVVDLR 1833
+GVS ++GRRPYMED + L +GD S F+GVFDGH G + Q + V REP F A+ +GFL+ + E+L+ A R + DGSTA+ +G L I + GDSRA+L G+ L+SDHKPN+P+E++R+ LGG VV +GV RV GILAVSRA GDR +K F+ AEPEV+E D FL++A+DG+WD +TN +A ++V D+ Q A+ L A +GS+DN AMV+DLR
Sbjct: 53 YGVSQMQGRRPYMEDRHTAVAEL------NGD--------SSHSFYGVFDGHGGEGAANYCVQAMCHNVIREPSFAKDPVAALKKGFLRTDQEYLQIANRKNSEDGSTAVAVLAQGDNLYIAHAGDSRAILVHSTGKVTALTSDHKPNRPDEKKRVQDLGGSVVF-WGVWRVEGILAVSRAIGDRMLKPFVIAEPEVKEHKRTSNDWFLIVASDGVWDTITNDDAASIVMKYNDV--QDAAKHLMEEAYARGSLDNICAMVIDLR 300 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1096.28.1 >prot_A-nodosum_M_contig1096.28.1 ID=prot_A-nodosum_M_contig1096.28.1|Name=mRNA_A-nodosum_M_contig1096.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=570bp MQHSNLARMPPSRRANVTGSDAMGESVTGGGVRTGRHLLRSAANSIHEQDback to top mRNA from alignment at A-nodosum_M_contig1096:192100..199997- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1096.28.1 ID=mRNA_A-nodosum_M_contig1096.28.1|Name=mRNA_A-nodosum_M_contig1096.28.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7898bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:192100..199997- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1096:192100..199997- >mRNA_A-nodosum_M_contig1096.28.1 ID=mRNA_A-nodosum_M_contig1096.28.1|Name=mRNA_A-nodosum_M_contig1096.28.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:192100..199997- (Ascophyllum nodosum dioecious)back to top |