mRNA_A-nodosum_M_contig1096.22.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: D7FP42_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP42_ECTSI) HSP 1 Score: 170 bits (431), Expect = 1.870e-48 Identity = 82/92 (89.13%), Postives = 89/92 (96.74%), Query Frame = 2
Query: 296 GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDT 571
G+RTKKVGITGKYGVRYGSSLRKVI+KIE+TQHA+YTCPFCGKDT KRMV+GIWKCSAC KISAGGAYTLNTPAAVTVRSTIARLRKG ++T
Sbjct: 2 GRRTKKVGITGKYGVRYGSSLRKVIKKIEITQHARYTCPFCGKDTVKRMVSGIWKCSACGKISAGGAYTLNTPAAVTVRSTIARLRKGATET 93
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A836C955_9STRA (Putative 60S ribosomal protein L37a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C955_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.030e-40 Identity = 70/93 (75.27%), Postives = 79/93 (84.95%), Query Frame = 2
Query: 296 GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTV 574
GKRTKKVGI GKYG RYG+SLRKVI+KIEV+QHAKYTC FCG+DT KR V GIW C C K+ AGGAYTLNTPAA TVRSTIARLR+ Q++ +
Sbjct: 2 GKRTKKVGICGKYGTRYGASLRKVIKKIEVSQHAKYTCVFCGRDTVKRSVVGIWSCGGCKKVVAGGAYTLNTPAAATVRSTIARLRRAQAEAI 94
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A7S1ZP16_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP16_TRICV) HSP 1 Score: 144 bits (363), Expect = 7.780e-38 Identity = 76/122 (62.30%), Postives = 89/122 (72.95%), Query Frame = 2
Query: 218 SPTQRRVITALCLA-GTFPAARYKRTK--GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTV 574
+PTQ +L L F +YK GKRTKKVGITGKYG RYGS+LRK+IRKIEV+QH+ Y C FCGKD+ KR TGIW C +C K+ AGGAY L+TPAAVT RSTI RLRKGQ++ V
Sbjct: 22 APTQSVPFESLSLRLPLFLFLKYKSNSKMGKRTKKVGITGKYGTRYGSTLRKIIRKIEVSQHSSYRCAFCGKDSVKRQCTGIWNCKSCRKVVAGGAYMLSTPAAVTARSTIGRLRKGQAEQV 143
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: K3WD89_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD89_GLOUD) HSP 1 Score: 144 bits (363), Expect = 8.790e-38 Identity = 67/92 (72.83%), Postives = 78/92 (84.78%), Query Frame = 2
Query: 293 KGKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSD 568
+GKRTKKVGI GKYG RYGSSLRKV++KIE++QHAKY C FCGKD+ KR VTGIWKC +C K+ AGGAY LNTP+A TVRST+ARLRK +
Sbjct: 53 QGKRTKKVGICGKYGTRYGSSLRKVVKKIEISQHAKYNCAFCGKDSVKRTVTGIWKCKSCFKVVAGGAYILNTPSAATVRSTLARLRKSHDE 144
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A485LCL6_9STRA (Aste57867_19186 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LCL6_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.650e-37 Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 2
Query: 296 GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQ 562
GKRTKKVGI GKYGVRYGSSLRKV++KIEV+QHAKY C FCGKD+ KR TGIWKC +C K++AGGAY LNT +A TVRST+ARLRK +
Sbjct: 2 GKRTKKVGICGKYGVRYGSSLRKVVKKIEVSQHAKYNCVFCGKDSVKRECTGIWKCKSCYKVTAGGAYLLNTASAATVRSTLARLRKAR 90
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A2D4CGJ9_PYTIN (60S ribosomal protein L37a putative n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CGJ9_PYTIN) HSP 1 Score: 141 bits (355), Expect = 4.510e-37 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 2
Query: 257 AGTFPAARYKRTKGKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTVA 577
+G+ A + + GKRTKKVGI GKYG RYG+SLRKV++KIE++QHAKY C FCGKD+ KR V GIWKC +C K AGGAY LNTP+A TVRST+ARLRK D A
Sbjct: 7 SGSSSARLEEASLGKRTKKVGICGKYGTRYGASLRKVVKKIEISQHAKYNCAFCGKDSIKRTVVGIWKCKSCHKTMAGGAYLLNTPSAATVRSTLARLRKTHDDASA 113
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: W7TSZ0_9STRA (60s ribosomal protein l37a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSZ0_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.350e-36 Identity = 66/93 (70.97%), Postives = 78/93 (83.87%), Query Frame = 2
Query: 296 GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTV 574
GKRTKKVGI GKYG RYG+SLRK+I+KIE++QH+KYTC FCGKD KR V GIWKC +C K AGGAYTL+T AAV VRST+ARLRK +++ V
Sbjct: 2 GKRTKKVGICGKYGTRYGASLRKIIKKIEISQHSKYTCVFCGKDNVKREVVGIWKCGSCKKSMAGGAYTLSTAAAVQVRSTLARLRKAKAEAV 94
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: F0WDJ7_9STRA (60S ribosomal protein L37a putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDJ7_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.390e-36 Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 2
Query: 296 GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRK 556
G+RTKKVGI GKYG RYGSSLRKV++KIE++QH+KY CPFCGKD+ KR VTGIW C +C K AGGAY LNTP+A TVRST+AR+R+
Sbjct: 2 GRRTKKVGICGKYGTRYGSSLRKVVKKIEISQHSKYNCPFCGKDSVKRTVTGIWNCKSCHKTMAGGAYLLNTPSAATVRSTLARIRR 88
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: A0A662XTU4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTU4_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.800e-36 Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 2
Query: 293 KGKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTVA 577
+GKRTKKVGI GKYG RYGSSLRKV++KIE++QH+KY C FCGKD+ KR VTGIW+C +C K+ AGGAY LNT +A TVRST+AR+RK D A
Sbjct: 1 QGKRTKKVGICGKYGTRYGSSLRKVVKKIEISQHSKYNCAFCGKDSIKRNVTGIWECRSCHKVIAGGAYLLNTASAATVRSTLARIRKVHDDNAA 95
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Match: M4BL92_HYAAE (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=M4BL92_HYAAE) HSP 1 Score: 138 bits (348), Expect = 3.160e-36 Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 2
Query: 296 GKRTKKVGITGKYGVRYGSSLRKVIRKIEVTQHAKYTCPFCGKDTTKRMVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSD 568
GKRTKKVGI GKYG RYGSSLRKV++KIE++QHAKY C FCGKD+ KR VTGIWKC +C K AGGAY LNT +A TVRST+ARLRK + D
Sbjct: 7 GKRTKKVGICGKYGTRYGSSLRKVVKKIEISQHAKYNCVFCGKDSIKRTVTGIWKCRSCYKTIAGGAYLLNTASAATVRSTLARLRKIRDD 97 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1096.22.1 >prot_A-nodosum_M_contig1096.22.1 ID=prot_A-nodosum_M_contig1096.22.1|Name=mRNA_A-nodosum_M_contig1096.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=47bp MVTGIWKCSACSKISAGGAYTLNTPAAVTVRSTIARLRKGQSDTVA*back to top mRNA from alignment at A-nodosum_M_contig1096:148574..152852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1096.22.1 ID=mRNA_A-nodosum_M_contig1096.22.1|Name=mRNA_A-nodosum_M_contig1096.22.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4279bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:148574..152852- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1096:148574..152852- >mRNA_A-nodosum_M_contig1096.22.1 ID=mRNA_A-nodosum_M_contig1096.22.1|Name=mRNA_A-nodosum_M_contig1096.22.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=141bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:148574..152852- (Ascophyllum nodosum dioecious)back to top |