mRNA_A-nodosum_M_contig1096.20.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: D7FP44_ECTSI (Sirohydrochlorin ferrochelatase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP44_ECTSI) HSP 1 Score: 229 bits (585), Expect = 1.740e-70 Identity = 110/128 (85.94%), Postives = 121/128 (94.53%), Query Frame = 2
Query: 311 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYGG 694
VGVIVCDHGS+RENAN MLFEVAERYR+F+GF+IVEAAHMELA+PSIE+AFDRCVAAGAQK+VLHPFFLSPGRHVTSDIP L+ AAAK+HP V WVVSEPLGLQELMPRVMHAAVSESV GAW++GG
Sbjct: 87 VGVIVCDHGSRRENANTMLFEVAERYRSFSGFEIVEAAHMELAEPSIEEAFDRCVAAGAQKVVLHPFFLSPGRHVTSDIPALMVAAAKRHPGVGWVVSEPLGLQELMPRVMHAAVSESVAGGAWRHGG 214
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A836CEJ2_9STRA (CbiX-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ2_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.460e-37 Identity = 71/118 (60.17%), Postives = 90/118 (76.27%), Query Frame = 2
Query: 362 MLFEVAERYR--------AFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQYG 691
M+ EVA R+R A A ++E AHMELA+P+IEQAFD+CVAAGA+ +VLHPFFLSPGRHV+SDIP L+AAAA +HP V W VSEPLGL LMP++M+ AV+ +++E WQ G
Sbjct: 1 MINEVAARFRQQAEASEAAAAAACVIEVAHMELAEPTIEQAFDKCVAAGAKAVVLHPFFLSPGRHVSSDIPELLAAAASRHPGVKWKVSEPLGLAPLMPQLMNDAVAAALQEPEWQGG 118
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A350CGA9_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A350CGA9_9PLAN) HSP 1 Score: 136 bits (343), Expect = 1.560e-35 Identity = 64/119 (53.78%), Postives = 90/119 (75.63%), Query Frame = 2
Query: 314 GVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVE 670
G+++ DHGS+R +N++L A+R+ ++G+ IVE AHMELA+PSI+QAFDRCVA GA++IV+ P+FLSPGRH T DIPGL+ AA HPEV W+V+ P GL + + + AVSE ++
Sbjct: 9 GLLIVDHGSRRAESNQLLHHAADRFARYSGWQIVEPAHMELAEPSIQQAFDRCVARGARRIVVFPWFLSPGRHWTEDIPGLVEQAAAVHPEVQWLVTPPFGLHQGLLQ----AVSERID 123
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A4D9D8W1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W1_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.710e-35 Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 2
Query: 311 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 673
VGVIV DHGS+R+ ANE L VA ++A +G+++VE AHMEL +PSI AF RCV GA I+ HPFFLS GRHV DIP L+ AA P V W +S+PLGLQ +PR+M AV E + E
Sbjct: 57 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAE 177
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A5Q4H7Y2_9PLAN (Sirohydrochlorin cobaltochelatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H7Y2_9PLAN) HSP 1 Score: 136 bits (342), Expect = 3.760e-35 Identity = 62/120 (51.67%), Postives = 86/120 (71.67%), Query Frame = 2
Query: 311 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVE 670
+GVIV DHGS+R AN+ML +V + ++ +G+ IVE AHMELA+PSI AFD CVA GA+ +VLHP+FL PG+H + DIP L AA KHP++ ++V+ PLGL LM +M ++ +E
Sbjct: 9 IGVIVVDHGSRRAEANQMLLDVVQMFQQRSGYSIVEPAHMELAEPSIATAFDHCVARGAEMVVLHPYFLLPGKHWSEDIPALARQAASKHPKIPFMVTAPLGLHPLMAEIMQQRIARCLE 128
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A7G9NWY9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetales bacterium zrk34 TaxID=2723666 RepID=A0A7G9NWY9_9BACT) HSP 1 Score: 135 bits (340), Expect = 7.390e-35 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 2
Query: 311 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESV 667
+G+IV DHGS+R +N++L V + + + + I+E AHMELA+P+IEQAFDRCV GA+ +V HPFFL PG+H DIP L AAAA KHP + W+V+ P+G+ E MP VM+ A+ +
Sbjct: 10 IGIIVVDHGSRRPESNDLLLAVVKLFAEQSDYPIIEPAHMELAEPTIEQAFDRCVQRGAKVVVCHPFFLLPGKHWNQDIPNLTAAAAGKHPGIRWMVTAPIGMNEKMPLVMNDAIDHCL 128
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: W7TSP7_9STRA (Cobalamin (Vitamin B12) biosynthesis CbiX n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP7_9STRA) HSP 1 Score: 138 bits (348), Expect = 8.960e-35 Identity = 68/121 (56.20%), Postives = 84/121 (69.42%), Query Frame = 2
Query: 311 VGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 673
VGVIV DHGS+R+ ANE L VA ++A +G+++VE AHMEL +PSI AF RCV GA I+ HPFFLS GRHV DIP L+ AA P V W +S+PLGLQ +PR+M AV E + E
Sbjct: 118 VGVIVVDHGSRRKEANEALESVASEFKALSGYELVEPAHMELCEPSIATAFGRCVERGATFIICHPFFLSRGRHVAEDIPNLLEEAASIFPGVEWALSQPLGLQADIPRLMQQAVEECIAE 238
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A518C237_9BACT (Sirohydrochlorin cobaltochelatase n=2 Tax=Bremerella TaxID=2714594 RepID=A0A518C237_9BACT) HSP 1 Score: 133 bits (334), Expect = 5.410e-34 Identity = 66/128 (51.56%), Postives = 86/128 (67.19%), Query Frame = 2
Query: 305 ETVGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESV---EEGA 679
E +G+I+ DHGS+R +N++L EV E +R AG+ IVE AHMEL +PSI QAF +CV GA +IV+HP+FLSPGRH DIP L AA HP + +V+ PLGL LM +VM + + EEGA
Sbjct: 9 ENLGIIIVDHGSRRAESNDLLLEVVELFRQTAGYKIVEPAHMELVEPSIAQAFQKCVGQGATRIVVHPYFLSPGRHWHEDIPRLAQEAAANHPGITHLVTAPLGLHPLMAKVMQERIETCLAHCEEGA 136
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A518DNN6_9BACT (Sirohydrochlorin cobaltochelatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DNN6_9BACT) HSP 1 Score: 132 bits (331), Expect = 7.240e-34 Identity = 61/122 (50.00%), Postives = 89/122 (72.95%), Query Frame = 2
Query: 308 TVGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEE 673
TVGV++ DHGS+RE +N ML EVA + + + I+E AHMELA+P+++ AFDRC+A GA++IV+HP+FL PG H DIP L A AA + P+V +VV+EPLGL L+ +V+ ++ ++ E
Sbjct: 6 TVGVVLVDHGSRREESNAMLLEVAAMFAQSSPYTIIEPAHMELAEPTLQTAFDRCIARGAEQIVVHPYFLLPGNHSREDIPRLAAEAAARRPDVPYVVTEPLGLHPLLGQVIRDRIAAALAE 127
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Match: A0A518DEM9_9BACT (Sirohydrochlorin ferrochelatase n=1 Tax=Pirellulimonas nuda TaxID=2528009 RepID=A0A518DEM9_9BACT) HSP 1 Score: 132 bits (333), Expect = 8.790e-34 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 2
Query: 296 GSTETVGVIVCDHGSQRENANEMLFEVAERYRAFAGFDIVEAAHMELAQPSIEQAFDRCVAAGAQKIVLHPFFLSPGRHVTSDIPGLIAAAAKKHPEVAWVVSEPLGLQELMPRVMHAAVSESVEEGAWQY------GGGGNC*G 712
G+ E+VG+IV DHGS+R+ +N +L EVAE +R +G +IVE AHMELA+PSI AFDRCV GA+++V+ P+FL PGRH DIP L A AA +HP V+ +V+ PLG+ L+ VM ++ + A G GG C G
Sbjct: 13 GADESVGIIVVDHGSRRDASNALLLEVAELFRRQSGMEIVEPAHMELAEPSIATAFDRCVERGAKRVVVMPYFLGPGRHWDQDIPALSAKAAARHPGVSHLVTAPLGIDPLIAAVMEDRIAVCLTNAAGAEAACNACGDGGRCRG 157 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1096.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1096.20.1 >prot_A-nodosum_M_contig1096.20.1 ID=prot_A-nodosum_M_contig1096.20.1|Name=mRNA_A-nodosum_M_contig1096.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=212bp MRVVCLLLAIAIGVAAAFVPNPSTTTRTLSARLQDRRLSTASPLGANQRRback to top mRNA from alignment at A-nodosum_M_contig1096:124445..126590+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1096.20.1 ID=mRNA_A-nodosum_M_contig1096.20.1|Name=mRNA_A-nodosum_M_contig1096.20.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2146bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:124445..126590+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1096:124445..126590+ >mRNA_A-nodosum_M_contig1096.20.1 ID=mRNA_A-nodosum_M_contig1096.20.1|Name=mRNA_A-nodosum_M_contig1096.20.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=636bp|location=Sequence derived from alignment at A-nodosum_M_contig1096:124445..126590+ (Ascophyllum nodosum dioecious)back to top |