prot_A-nodosum_M_contig1074.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1074.2.1
Unique Nameprot_A-nodosum_M_contig1074.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length611
Homology
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 4.890e-80
Identity = 125/160 (78.12%), Postives = 137/160 (85.62%), Query Frame = 0
Query:   64 TVAQKSKPPRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQRKG 223
            T  + S  PRRWQP ED+ L  +VK+ GE +WK+IA KVGSRNHVQCLQRWKKVLRPGLVKGQW AEED  LMKLA++ +KNWGVLS  M GRTSKQCRERWCHHLDPSINKGAYT EED IIIE Q ++GN+WSQIAARLPGRTENSIKIRCKALQRKG
Sbjct:   98 TRKKASTRPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRKG 257          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 3.180e-77
Identity = 134/185 (72.43%), Postives = 151/185 (81.62%), Query Frame = 0
Query:   72 PRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQRK-----GTSGGSRSTTNLP--RASKKAESIASKSR 249
            PRRWQP ED+ L  +VK+ GE +WK+IA KVGSRNHVQCLQRWKKVLRPGLVKGQW AEED  LMKLA++ +KNWGVLS  M GRTSKQCRERWCHHLDPSINKGAYT EEDKIIIE Q K+GN+WSQIAARLPGRTENSIKIRCKALQRK      +SGG   +T+ P  RA KK+   ++ +R
Sbjct:  113 PRRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGRSGSTSSPAGRAPKKSTGTSTTAR 297          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.600e-63
Identity = 102/159 (64.15%), Postives = 124/159 (77.99%), Query Frame = 0
Query:   70 KPPRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQRKGTSGGS 228
            K PR+W   ED  L  +V+++GE+NWK IA +VG+RNHVQCLQRWKKVL+PGLVKGQWSA ED  L+ L   G+KNWG L+  MPGRTSKQCRERW HHLDPS+ KG YT EED  I+ +Q+++GNKWS+IA  LPGRTEN++KIR KAL R   + GS
Sbjct:   25 KIPRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNAGS 183          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 205 bits (521), Expect = 2.210e-59
Identity = 90/150 (60.00%), Postives = 117/150 (78.00%), Query Frame = 0
Query:   72 PRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            P+RW P ED  L ++V +HGE NWK+IA +V  RNH QCLQRW KVL PGLVKG W  +ED +L +L + G KNWG ++  +PGRTSKQCRERW +HLDPSI +G Y+AEED++I++ Q ++GN+WS IAA LPGRTE+++KIR K+L R
Sbjct:    9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 213 bits (543), Expect = 3.140e-58
Identity = 100/167 (59.88%), Postives = 127/167 (76.05%), Query Frame = 0
Query:   58 APAVATTVAQ---KSKPPRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            APAV  + A+   KS P RRW   ED  L  +V++ GE NWKAIA +V  RNH QCLQRW KVL+PGL+KG W+ EED  L  L + G KNWG +++H+PGRTSKQCRERWC+HLDP+INKG YT EED++I++MQ K+GN+WS IA +L GRTE+++KIR K+L R
Sbjct:   92 APAVTISSARGGDKSNP-RRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMR 257          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 204 bits (519), Expect = 4.600e-58
Identity = 94/162 (58.02%), Postives = 121/162 (74.69%), Query Frame = 0
Query:   61 VATTVAQKSKP-PRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            V T +  K K  P+RW P ED  L ++V +HGE NWK+IA +V  RNH QCLQRW KVL PGLVKG W  EED +L +L + G KNWG ++  +PGRTSKQCRERW +HLDPSI +G Y+ EED++I++ Q ++GN+WS IAA LPGRTE+++KIR K+L R
Sbjct:   70 VRTIMKTKDKAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 231          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 2.700e-57
Identity = 94/150 (62.67%), Postives = 118/150 (78.67%), Query Frame = 0
Query:   72 PRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            PRRW P ED  L  +V+++   +WK IAA+V +RNHVQCLQRWKKVL PGLVKGQW+ EED +L+ + + G+KNWG LS  +PGRTSKQCRERWCHHLDP I KG +T EED+II+ +Q ++GNKW++IA  L GRTEN+ KIR K L+R
Sbjct:   68 PRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.690e-57
Identity = 89/150 (59.33%), Postives = 116/150 (77.33%), Query Frame = 0
Query:   72 PRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            P+RW P ED  L D+V +HGE NWK+IA +V  RNH QCLQRW KVL PGLVKG W  +ED +L +L + G KNWG ++  +PGRTSKQCRERW +HLDPSI +G Y+  ED++I++ Q+++GN+WS IAA LPGRTE+++KIR K+L R
Sbjct:   99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 248          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A024UM09_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM09_9STRA)

HSP 1 Score: 213 bits (542), Expect = 5.980e-57
Identity = 100/167 (59.88%), Postives = 127/167 (76.05%), Query Frame = 0
Query:   58 APAVATTVAQ---KSKPPRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            APAV  + A+   KS P RRW   ED  L  +V++ GE NWKAIA +V  RNH QCLQRW KVL+PGL+KG W+ EED  L  L + G KNWG +++H+PGRTSKQCRERWC+HLDP+INKG YT EED++I++MQ K+GN+WS IA +L GRTE+++KIR K+L R
Sbjct:   92 APAVTISSARGGDKSNP-RRWSKVEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMR 257          
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA)

HSP 1 Score: 210 bits (535), Expect = 1.900e-56
Identity = 94/150 (62.67%), Postives = 118/150 (78.67%), Query Frame = 0
Query:   72 PRRWQPNEDRILADSVKQHGEANWKAIAAKVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLSNHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQIAARLPGRTENSIKIRCKALQR 221
            PRRW   ED  L  +V++ GE NWKAIA +V  RNH QCLQRW KVL+PGL+KG W+ EED  L  L + G KNWG +++H+PGRTSKQCRERWC+HLDP+INKG YT EED++II+MQ K+GN+WS IA +L GRTE+++KIR K+L R
Sbjct:   97 PRRWSKAEDESLRLAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMR 246          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1074.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM16_ECTSI4.890e-8078.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJU6_9PHAE3.180e-7772.43MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2UU49_9STRA2.600e-6364.15Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
H3G911_PHYRM2.210e-5960.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A418B0H6_9STRA3.140e-5859.88Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
D0NJN5_PHYIT4.600e-5858.02Myb-like DNA-binding protein, putative n=2 Tax=Phy... [more]
A0A6H5K458_9PHAE2.700e-5762.67MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A3M6VKU0_9STRA4.690e-5759.33Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A024UM09_9STRA5.980e-5759.88Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0XBC5_9STRA1.900e-5662.67Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 123..171
e-value: 2.3E-9
score: 47.1
coord: 71..120
e-value: 9.4E-10
score: 48.4
coord: 174..222
e-value: 2.7E-11
score: 53.5
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 119..169
score: 10.789328
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 67..118
score: 9.581638
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 170..215
score: 8.490072
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 177..219
e-value: 3.14449E-8
score: 47.9554
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 127..169
e-value: 7.78259E-11
score: 55.2742
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 74..118
e-value: 1.30321E-9
score: 51.8074
NoneNo IPR availableGENE3D1.10.10.60coord: 63..123
e-value: 2.6E-15
score: 58.0
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 75..135
e-value: 4.5E-12
score: 46.0
NoneNo IPR availableGENE3D1.10.10.60coord: 124..174
e-value: 3.4E-17
score: 64.1
NoneNo IPR availableGENE3D1.10.10.60coord: 177..253
e-value: 4.2E-14
score: 54.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..273
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 63..137
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 126..288
NoneNo IPR availablePANTHERPTHR45614:SF152SUBFAMILY NOT NAMEDcoord: 63..137
coord: 126..288
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 175..215
e-value: 7.8E-10
score: 38.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 174..224
score: 14.64524
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 119..173
score: 19.39283
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 73..118
score: 13.005377
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 149..223
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 98..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1074contigA-nodosum_M_contig1074:28968..37306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1074.2.1mRNA_A-nodosum_M_contig1074.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1074 26927..37598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1074.2.1 ID=prot_A-nodosum_M_contig1074.2.1|Name=mRNA_A-nodosum_M_contig1074.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=611bp
MVQPKRFLPSSGYEEGERVKRQNSGYTRPRSRRLCSEDDEYTTDETSEDE
EEGPAPAAPAVATTVAQKSKPPRRWQPNEDRILADSVKQHGEANWKAIAA
KVGSRNHVQCLQRWKKVLRPGLVKGQWSAEEDTMLMKLASSGYKNWGVLS
NHMPGRTSKQCRERWCHHLDPSINKGAYTAEEDKIIIEMQTKIGNKWSQI
AARLPGRTENSIKIRCKALQRKGTSGGSRSTTNLPRASKKAESIASKSRR
RQSSASSTASATSGVSAADSAVDQQLSEGGEEFPEGMQSSPLTTARGCSP
HQLAGHKFELLNQSSPQKSLGQQQQPPMFSQTACRGKTPRPSAAASFSDS
SAASEGALGILASGLVPAPPPMLIPPPESVSQKRWWHWSKTSGATDSTMH
HSELPRSWPTNSESGSTEATFKHEHESQRLPCLASTMEHHLVDRPPMGAA
GGGGGGGGDGRIYNAPFDGTTMPNAGLPGSLSCSSFDQGSLGNYFTSDLN
SAVTQQESARISHELACVEQACVTAGPSAGAGMVSSAPLVEMAPSPTAVA
AGKERGGFSFGDFNTLSLEDLKAAVGEDEDEDTGAPLQTYCSFLDTPEDD
VAVGDMPLSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf