prot_A-nodosum_M_contig1069.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1069.3.1
Unique Nameprot_A-nodosum_M_contig1069.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length98
Homology
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.990e-20
Identity = 45/95 (47.37%), Postives = 66/95 (69.47%), Query Frame = 0
Query:    4 DDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            DD +   E  L +++P G+ L ++ P+AL ++LV + +L++LG+GWF GVI+R+A   + D YD+RV L +DGSTRS+KLPL  YS D  A  GS
Sbjct: 1868 DDQLCAGEESLEMDIPDGFQLQASPPSALDQSLVKRGVLVKLGLGWFGGVISRRAHPASRDEYDYRVVLHSDGSTRSMKLPLESYSTDEDAGVGS 1962          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5KHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL7_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.120e-20
Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 MDIDDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            +D DD +  D+ +  +E+P G+ + ++ PAAL   L+ + +L+RLGMGWF G+ITR++Q RT   YD+RV L+ D STR +KL L  Y  D  A  GS
Sbjct:    7 VDDDDSMESDDEIRAMEIPDGFRIQASTPAALDNLLLQRGLLVRLGMGWFGGLITRQSQERTRHLYDYRVHLDLDQSTRGMKLQLEMYKGDPDAVVGS 104          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5KHK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK5_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.480e-20
Identity = 47/96 (48.96%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    3 IDDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            +D  V +DE+   +E+PAG+ +    P AL R L+ + +L RLGMGWFRG+IT+++Q  T   YD+ + LE D STR +KLPL KYS D  AA GS
Sbjct:   65 MDPQVPEDEIQ-GMEIPAGFRIQEAKPVALDRLLLRRGVLARLGMGWFRGLITQQSQKDTRHLYDYCMQLELDQSTRKMKLPLDKYSGDSDAAVGS 159          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5KA94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA94_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.480e-19
Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    4 DDDVAD----DEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            DDD  D    ++ +  +E+PAG+ +    P AL R L+ + +L+RLGMGWF G+IT++ Q  T   YD+ V LE D STR +KLPL KYS D  AA GS
Sbjct:   21 DDDSTDPQNPEDEIQGMEIPAGFRIQDAKPVALGRLLLRRGVLVRLGMGWFGGLITQQYQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGS 119          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5JXN2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN2_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 3.120e-19
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    8 ADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            +DDE+   +E+P G+ + ++ PAAL  +L+ + +L+RLGMGWF GVITR++Q RT   YD+RV L+ D STRS+KLPL  Y  D  A  GS
Sbjct:  545 SDDEIRA-MEIPDGFRIQASTPAALDNSLLQRGLLVRLGMGWFGGVITRQSQERTRHLYDYRVHLDLDRSTRSMKLPLEMYKGDPDAVVGS 634          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5K5W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.130e-19
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 0
Query:   16 LEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            +E+PAG+ +    P AL R L+ +E+L R+GMGWF G+IT ++Q  T   YD+ V LE D STR +K PL KYS D  AA GS
Sbjct:   19 MEIPAGFRIQEAKPVALDRLLLRREVLFRVGMGWFGGLITEQSQKDTRHLYDYCVQLELDQSTRKMKSPLDKYSGDSDAAVGS 101          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5K5K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5K9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 5.180e-19
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 0
Query:   16 LEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS 98
            +++PAG+ +    P AL R L+ + +L+RLGMGWF G+IT+++Q  T   YD+ V LE D STR +KLPL KYS D  AA GS
Sbjct:   43 MKIPAGFRIQEAKPVALGRLLLRRGVLVRLGMGWFGGLITQQSQKDTRHLYDYCVQLELDRSTRKMKLPLDKYSGDSDAAVGS 125          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5L5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 5.250e-19
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 MDIDDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKY 88
            +D DD +  D+ +  +E+P G+ + +  PAA+  +L+ + +L+RLGMGWF GVITRK+Q RT   YD+RV L+ D ST S+KLPL  Y
Sbjct:  252 VDDDDSMESDDEIHAMEIPDGFCIQACTPAAIDSSLLQRGVLVRLGMGWFGGVITRKSQERTRHLYDYRVHLDLDQSTSSMKLPLEMY 339          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5K2B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B3_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 5.860e-19
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    1 MDIDDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKY 88
            +D DD +  D  +  +E+P G+ + ++ PAAL  +L+ + +L+RLGMGW  G+ITR++Q RT   YD+RV L+ D STRS+KLPL  Y
Sbjct:  106 VDDDDSMESDNEIHAMEIPDGFRIQASTPAALDSSLLQRGLLVRLGMGWLGGIITRQSQERTRHLYDYRVHLDLDQSTRSMKLPLEMY 193          
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Match: A0A6H5KUT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT4_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.630e-18
Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    1 MDIDDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWFRGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPL 85
            +D DD +  D+ +L +E+P G+ + ++ PAAL  +   + +L+RLGMGWF  VITR++Q RT   YD+RV L+ D STRS+KLPL
Sbjct:  129 VDDDDSMESDDEILAMEIPDGFRIQASTPAALDSSSPQRGVLVRLGMGWFGRVITRQSQERTRHLYDYRVHLDLDQSTRSMKLPL 213          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1069.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH58_9PHAE1.990e-2047.37Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KHL7_9PHAE2.120e-2044.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHK5_9PHAE2.480e-2048.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA94_9PHAE2.480e-1947.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN2_9PHAE3.120e-1950.55C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K5W3_9PHAE3.130e-1950.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5K9_9PHAE5.180e-1950.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5J8_9PHAE5.250e-1947.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2B3_9PHAE5.860e-1946.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUT4_9PHAE1.630e-1848.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1069contigA-nodosum_M_contig1069:38320..38613 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1069.3.1mRNA_A-nodosum_M_contig1069.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1069 38221..38613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1069.3.1 ID=prot_A-nodosum_M_contig1069.3.1|Name=mRNA_A-nodosum_M_contig1069.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=98bp
MDIDDDVADDEVLLPLEVPAGYSLVSTAPAALTRALVHQEILLRLGMGWF
RGVITRKAQARTSDRYDFRVFLETDGSTRSVKLPLAKYSVDGAAAEGS
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