prot_A-nodosum_M_contig10.56.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.56.1
Unique Nameprot_A-nodosum_M_contig10.56.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length242
Homology
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BLAST of mRNA_A-nodosum_M_contig10.56.1 vs. uniprot
Match: D7FM23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM23_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 3.390e-38
Identity = 87/160 (54.37%), Postives = 100/160 (62.50%), Query Frame = 0 
Query:    1 MRCSFGGFSRFKLVFIHYE-----------------SGKESTLIVERFGGNMMSFHAEAYGRDDGGPAD-EPSSELVFQTQVMKTDDDARELLDRYFQSVVRAASGP-----------------EELRQCIVCLGQMDVPLSLLQELAAPLPDGSRTQSI 125
            M+C  GGFSR+KLVFIH+E                 SGKES L+VER+GGNMM+ +AE      GG     P SEL F T VMK DDDAR LL RYFQS+VRA+S P                 +EL+ CIVC+G MDVPLSLLQELAAPLPD SRTQS+
Sbjct:  117 MQCCHGGFSRYKLVFIHHEVKCGKRSDATLAFDGYMSGKESALVVERYGGNMMTLNAEPSAVMGGGDGPVPPESELSFTTHVMKADDDARTLLGRYFQSIVRASSDPSPQAYSRYCRVTSSRVSKELQDCIVCIGAMDVPLSLLQELAAPLPD-SRTQSM 275
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM23_ECTSI3.390e-3854.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:607877..611451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.56.1mRNA_A-nodosum_M_contig10.56.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 607024..618357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.56.1 ID=prot_A-nodosum_M_contig10.56.1|Name=mRNA_A-nodosum_M_contig10.56.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=242bp
MRCSFGGFSRFKLVFIHYESGKESTLIVERFGGNMMSFHAEAYGRDDGGP
ADEPSSELVFQTQVMKTDDDARELLDRYFQSVVRAASGPEELRQCIVCLG
QMDVPLSLLQELAAPLPDGSRTQSIVCSAFVPCREAPQHQLRAPQANTNE
PTPDLSPCPRRWRSSAITRTGREDDERCLGGRGGDVASAPRGQVGGGEIA
RGDQVGPTGGSDVDPGGTGTAERDGGETERRVGDNNDDDWF*
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