prot_A-nodosum_M_contig1063.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1063.2.1
Unique Nameprot_A-nodosum_M_contig1063.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length112
Homology
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A8J5Y646_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5Y646_9ROSI)

HSP 1 Score: 76.6 bits (187), Expect = 5.280e-14
Identity = 41/100 (41.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            CE C   K  R   P  T  RAS K +    DV GPM+  SL GN Y ++F+DDYTR+  V F+K KS      +   A   T     IK IR+DN  E+
Sbjct:  398 CEVCQMGKQARLLFPANTTWRASSKLELVHTDVCGPMRTESLSGNRYFILFIDDYTRYCWVYFLKHKSKVVQVFMKFKAAMETETGCKIKTIRSDNGAEY 497          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A8J5ZMU9_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZMU9_9ROSI)

HSP 1 Score: 76.6 bits (187), Expect = 5.600e-14
Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            CE C   K  R   P  T  RAS K +    DV GPM+  SL GN Y ++F+DDYTR+  V F+K KS+     +   A   T     +K IR+DN  E+
Sbjct:  494 CEVCQMGKQARLPFPSNTTWRASSKLELVHNDVCGPMRTESLSGNRYFILFIDDYTRYCWVYFLKHKSEVAQVFMKFKAAAETETGCKLKTIRSDNGAEY 593          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A8J5ZMG2_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5ZMG2_9ROSI)

HSP 1 Score: 76.3 bits (186), Expect = 7.370e-14
Identity = 41/100 (41.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            CE C   K  R   P  T  RAS K +    DV GPM+  SL GN Y ++F+DDYTR+  V F+K KS+     +   A   T     IK IR+DN  E+
Sbjct:  454 CEVCQMGKQARLPFPTNTTWRASSKLELVHSDVCGPMRTESLSGNKYFILFIDDYTRYCWVYFLKHKSEVAQVFIKFKAAVETETGCKIKTIRSDNGTEY 553          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 76.3 bits (186), Expect = 7.400e-14
Identity = 41/112 (36.61%), Postives = 56/112 (50.00%), Query Frame = 0
Query:    1 MMGIETTGQWGACETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            M G+  T +   CE C + K  R   PK  + RAS   +  + DV GPM   SLGG+ Y V F+DDY+R+  V F+K KS+                   IK +R+DN GE+
Sbjct:  357 MDGVSNTNENQFCEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKPIKVLRSDNGGEY 468          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A8J6A195_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6A195_9ROSI)

HSP 1 Score: 76.3 bits (186), Expect = 7.450e-14
Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            CE C   K  R   P  T  RAS K +    DV GPM+  SL GN Y ++F+DDYTR+  + F+K KS+     +   A   T     IK IR+DN  E+
Sbjct:  400 CEVCQMGKQARLPFPVNTTWRASSKLELVHTDVCGPMRTESLSGNRYFILFIDDYTRYCWIYFLKHKSEVAQVFIKFKAAVKTETGCKIKTIRSDNGTEY 499          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A8J6CGJ9_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CGJ9_9ROSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.350e-13
Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            CE C   K  R   P  T+ R S K +    DV GPMK  SL G+ Y ++F+DDYTRF  + F+K KS+     +   A       L +K IRTDN  E+
Sbjct:   60 CEVCQIGKQARLPFPANTSWRISTKLELVHSDVCGPMKTESLNGSKYFILFIDDYTRFSWIYFLKHKSEVAQVFVKFKAATEIETGLKLKTIRTDNGTEY 159          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A1Y1K2V0_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K2V0_PHOPY)

HSP 1 Score: 75.1 bits (183), Expect = 1.870e-13
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 0
Query:    3 GIETTGQWGACETCFQVKAKRHA-VPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            GIE T Q   CE C  VK K+H  V +   +RA  +G+   VD+ GPM+ +S GG+ Y + F  DY++F+++KF+K+KS+TT  I  ++          +K +R D  GEF
Sbjct:  458 GIEYTKQDFFCEAC--VKGKQHRKVFQVRQQRAQREGEVMNVDLCGPMEITSYGGSRYFICFTCDYSKFRLIKFLKEKSETTKGIAEVLNFVKNQCGRPLKMLRCDGGGEF 566          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A7D9J652_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J652_PARCT)

HSP 1 Score: 73.9 bits (180), Expect = 2.290e-13
Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 0
Query:    1 MMGIETTGQWGACETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            M G+  T +   CE C + K  R   PK  + RAS   +    DV GPM   SLGG+ Y V F+DDY+R+  V F+K KS+                   IK +R+DN GE+
Sbjct:   81 MDGVSNTNENQFCEACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTYATNITGKPIKVLRSDNGGEY 192          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A061GT04_THECC (Integrase catalytic domain-containing protein n=2 Tax=Theobroma cacao TaxID=3641 RepID=A0A061GT04_THECC)

HSP 1 Score: 74.7 bits (182), Expect = 2.600e-13
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILS--MVADCITPQKLSIKCIRTDNSGEF 112
            CE C Q K  RH  PK++  RA+ + Q    D+ GP+   SL GN Y ++F+DD++RF  + F+K+KS+     +   ++ +  T QK  IK +R+DN  E+
Sbjct:  493 CEVCLQGKQSRHPFPKQSQTRATNRLQLIHTDICGPIGTLSLNGNKYFILFIDDFSRFCWIFFLKQKSEAIQYFMKFKVLVEKQTDQK--IKALRSDNGSEY 592          
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Match: A0A2N9HDW4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HDW4_FAGSY)

HSP 1 Score: 73.9 bits (180), Expect = 2.700e-13
Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   13 CETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLSIKCIRTDNSGEF 112
            CE C   K  R + PK+ + RA+   Q    DV GP+K SSLG NNY ++F+DD++R   + F+K+KS+   A     A         IK +R+D  GEF
Sbjct:   15 CEGCLFGKQSRKSFPKEASTRANKPLQLVHADVCGPIKPSSLGKNNYFLLFIDDFSRKTWIYFLKQKSEVFGAFKKFKAFVEKQSGQEIKALRSDRGGEF 114          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1063.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5Y646_9ROSI5.280e-1441.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5ZMU9_9ROSI5.600e-1440.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J5ZMG2_9ROSI7.370e-1441.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A7D9HXK4_PARCT7.400e-1436.61Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J6A195_9ROSI7.450e-1440.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6CGJ9_9ROSI1.350e-1340.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A1Y1K2V0_PHOPY1.870e-1338.74Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A7D9J652_PARCT2.290e-1336.61Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A061GT04_THECC2.600e-1337.25Integrase catalytic domain-containing protein n=2 ... [more]
A0A2N9HDW4_FAGSY2.700e-1339.00Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 27..112
e-value: 2.0E-11
score: 45.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 23..112
score: 10.077195
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 33..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1063contigA-nodosum_M_contig1063:143365..143700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1063.2.1mRNA_A-nodosum_M_contig1063.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1063 143344..143700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1063.2.1 ID=prot_A-nodosum_M_contig1063.2.1|Name=mRNA_A-nodosum_M_contig1063.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=112bp
MMGIETTGQWGACETCFQVKAKRHAVPKKTNERASVKGQRFFVDVGGPMK
HSSLGGNNYVVIFVDDYTRFKVVKFVKKKSDTTAAILSMVADCITPQKLS
IKCIRTDNSGEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf