prot_A-nodosum_M_contig1051.30.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1051.30.2
Unique Nameprot_A-nodosum_M_contig1051.30.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length769
Homology
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 1.480e-97
Identity = 192/409 (46.94%), Postives = 258/409 (63.08%), Query Frame = 0
Query:    1 MDHSDIKKWVMSVAACETVATLPEIRRYFHGRVEKVIIDACLVQLHHNFRDTVMACAEFMSIIVPPDLKANIGVKSNEKEQRKEAKQPGEAGAAASLSPDKKEEDDY----VAGGY---LKPGDSDFDFIEHPLEKRANKARENDCKDVKELQDILDEAKGQPGLARTRKLVSKMLKRVKAELEERKQLRQLSKLQEKPLATKEIS-QKLHPAYASNGPGYASFKPPSIPDGKQPEATINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNARR-VIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            MDHS IK WV+ VA+   +AT  EI+RYFHGRV++ +ID    +   N R TV+ CAEF++I VPP+                                D++EEDD     VAG +    +    D+   EHPLE+RAN+A++NDCKD+  L  IL EA G+ GL + +K++ KM+KR+    EE+KQLR  S L+ K    +E+S QKLHPAYAS  P ++SF P +IPD K P+A +++P NVVGWVIGK G RI  +Q +TNAAMW+DQNFP+G  RKLHI+G   +VEAA+ EVE+L+KSAP+N  R   +   ++     LPPGHPD+         ++ K + CPH+LVG LIGKKGA I  IK+ SNANVE+ Q +P+G PR+V ITG+   VDLA  +V+E
Sbjct:    1 MDHSVIKNWVLEVASRRVLATSDEIKRYFHGRVDEDVIDFYNEEFS-NSRATVIQCAEFLNIEVPPE--------------------------------DEEEEDDINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMIKRINETREEQKQLRTQSLLKPK----REVSSQKLHPAYASKKPTFSSFAPSTIPD-KVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIDEVEFLMKSAPVNTPRPGKMGPKQLPHGGGLPPGHPDL--------NYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTADEVDLAATLVDE 363          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 1.290e-93
Identity = 193/419 (46.06%), Postives = 266/419 (63.48%), Query Frame = 0
Query:    1 MDHSDIKKWVMSVAACETVATLPEIRRYFHGRVEKVIIDACLVQLHHNFRDTVMACAEFMSIIVPPDLKANIGVKSNEKEQRKEAKQPGEAGAAASLSPDKKE-------------EDDYVAGGY---LKPGDSDFDFIEHPLEKRANKARENDCKDVKELQDILDEAKGQPGLARTRKLVSKMLKRVKAELEERKQLRQLSKLQEKPLATKEIS-QKLHPAYASNGPGYASFKPPSIPDGKQPEATINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNAR--RVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            MDHS IK+WV+ VA+   +AT  EI+RYFHGRV++ +ID    +   N R TV+ CAEF++I VPPD + + G      + ++E +  G  G                          + VAG +    +    D+   EHPLE+RAN+A++NDCKD+  L  IL EA G+ GL + +K++ KM+KR+    EE+K+LR  S ++ K    +E+S QKLHPAYAS  P ++SF P +IPD K P+A +++P NVVGWVIGK G RI  +Q +TNAAMW+DQNFP+G  RKLHI+G   +VEAA+AEVE+L+KSAP+N  R  R+ P  ++     LPPGHPD+         ++ K + CPH+LVG LIGKKGA I  IK+ SNANVE+ Q +P+G PR+V ITG+   VDLA  +V+E
Sbjct:  400 MDHSVIKEWVLEVASRRVLATPDEIKRYFHGRVDEDVIDFYNEEFS-NCRATVIQCAEFLNIEVPPDDQISRG------DLKREPEDQGARGGGVXXXXXXXXXXXXXXXXXXXXINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKKLRTQSVVKPK----REVSAQKLHPAYASKEPTFSSFAPSTIPD-KVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPARMGP-KQLPHGGGLPPGHPDL--------NYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDE 797          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A7S2TVW3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TVW3_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 1.570e-20
Identity = 67/187 (35.83%), Postives = 99/187 (52.94%), Query Frame = 0
Query:  230 TINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVL----------------CPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            T++ P  +VG VIG+AG  I  L+++T   + IDQNFP G+ RK+ I G  S++EAAV  V   + + P ++A    P + VG    L  G   +PP  S     A K                   CP  LVG +IG+ G TI  ++N S  ++++NQNFP GVPR++ + G+   V   V MV++
Sbjct:  106 TLDCPPTLVGRVIGRAGATIRWLEQKTRCRLQIDQNFPPGYPRKIQIMGNPSDMEAAVKLVTETMHNGPPSDA----PGAGVGMAQDLQSG---LPPSVSTRMNQAFKAAPATEVKGTGPEISETLDCPQHLVGRVIGRGGETIRDLQNRSGCSIQINQNFPPGVPRKITVAGAQSLVVAGVKMVQD 285          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: I0ZA07_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZA07_COCSC)

HSP 1 Score: 92.4 bits (228), Expect = 1.100e-15
Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 0
Query:  205 AYASNGPGYASFKPPSIPDGKQPEA----TINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSE-VEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            A ASNG G        +P G   +     TI++P  +VG +IGK G  I QLQ  TN  + ID   P G A+K+ I G S E V+AA  +VE ++                                +  +    A + V CP  +VG +IG+ G TI  ++  S A++ V+QN+PEG PR V+I+G P +V+ AV MV E
Sbjct:  229 ADASNGGG--------VPSGMAAQGQFYETIDIPAPMVGKLIGKGGETIKQLQYNTNTRVQIDHQTP-GEAKKVSIQGDSHEAVQAAKQQVEQIVS-------------------------------MDDSGAGGASQSVECPQGIVGRIIGRGGETIRALQQASQAHIVVDQNYPEGEPRRVNISGRPDAVERAVKMVSE 389          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A836BSU0_9CHLO (WW domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BSU0_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 5.400e-15
Identity = 66/198 (33.33%), Postives = 92/198 (46.46%), Query Frame = 0
Query:  206 YASNGPGYASFKPPSIPDGKQPEATINV---PQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            Y S G    S   P++  G    + + V   P + VG VIG+AG  I  L+  +   + +D        + + I GK  +V+     V+ LI     N                     PD PP +      A K + CPHS+VG +IG+ G TI  ++  S A++ VNQ FPEG PR + ITG+  SVD A AMVEE
Sbjct:  101 YPSGGSEVPSMLSPALLGGLDLPSAVEVVMCPPDRVGRVIGRAGATIRDLEGSSGCRIQVDHKAMGD--KPVTISGKREDVDRVKRTVQDLIAGRSAN---------------------PDAPPAAG----EAQKQIECPHSVVGRVIGRGGETIRTLQQASGAHIHVNQEFPEGTPRMITITGNQDSVDRAAAMVEE 271          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A8J9SGT6_9CHLO (Probable far upstream element-binding protein 1 at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SGT6_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 1.960e-14
Identity = 69/216 (31.94%), Postives = 100/216 (46.30%), Query Frame = 0
Query:  186 SKLQEKPLATKEISQKLHPAYASNGPGYASFKPPSIPDGKQPEATINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSE-VEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            SK  + P    + +  +HP  A    G  S     +    Q    I++P  +VG +IGK G  I QLQ  T   + ID   P G A+K+ I G S E VEAA  +VE ++                                +  +    A + V CP  +VG +IG+ G TI  ++  S A++ V+QN+PEG PR V+I+G P +V+ AV MV E
Sbjct:  267 SKFSDAPTGFSDSAPAVHPVMADASNGVPSS---GMAASGQFFDVIDIPAPMVGKLIGKGGETIKQLQYSTGTRVQIDHQTP-GEAKKVSITGDSQEAVEAAKKQVEQIVT-------------------------------LDESGTGGASQSVECPQGIVGRIIGRGGETIRALQQASQAHIVVDQNYPEGEPRRVNISGRPDAVERAVKMVSE 447          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A835SK22_9CHLO (WW domain-containing protein n=2 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SK22_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 2.490e-14
Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 0
Query:  230 TINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            T+  P + VG VIG+AG  I  L+  T   + +D   P    + + I G++ EVE A  +V  LI              S  G         PD    S+ +   A K + CP  +VG +IG+ G TI  ++  S A++ VNQ+FP+GVPR++ ITGS  +VD A +MV+E
Sbjct:  125 TVMCPPDKVGRVIGRAGATIRDLEASTGTRIQVDHKAPGD--KPVTISGRADEVERAKRQVLDLI--------------SGHGGXXXXXXXXPD----SAPAPGEAQKSLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQITITGSQDAVDRAASMVQE 275          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A2Z5X880_9CHLO (C1, subunit of the circadian RNA-binding protein CHLAMY1 n=1 Tax=Yamagishiella unicocca TaxID=51707 RepID=A0A2Z5X880_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 6.780e-14
Identity = 60/178 (33.71%), Postives = 86/178 (48.31%), Query Frame = 0
Query:  223 DGKQPEATINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            DG     TI  P + VG VIG+AG  I  L+  T+  + +D   P    + + I GK  +VE A   V  LI                         G  D  P++        KM+ CP  +VG +IG+ G TI  ++  S A++ VNQ+FP+G+PR++ ITG+  SVD A+ MV E
Sbjct:  138 DGATATETIMCPSDKVGRVIGRAGATIRDLEASTSTRIQVDHKAPG--EKPVTISGKRDDVERAKRTVLDLIS------------------------GTGDTVPVTG----EVQKMLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGIPRQITITGTQDSVDRAINMVSE 285          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: A0A2Z5X8C8_9CHLO (C1, subunit of the circadian RNA-binding protein CHLAMY1 n=1 Tax=Yamagishiella unicocca TaxID=51707 RepID=A0A2Z5X8C8_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 3.600e-13
Identity = 58/178 (32.58%), Postives = 87/178 (48.88%), Query Frame = 0
Query:  223 DGKQPEATINVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            DG     TI  P + VG VIG+AG  I  L+  T+  + +D   P    + + I GK  +VE A   V  LI                         G  D  P++        +M+ CP  +VG +IG+ G TI  ++  S A++ VNQ+FP+GVPR++ ITG+  +V+ A++MV E
Sbjct:  134 DGSTATETIMCPSDKVGRVIGRAGATIRDLEASTSTRIQVDHKAPG--EKPVTISGKREDVERAKRTVLDLIS------------------------GTGDTVPVTG----EVQRMLECPQGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDGVPRQITITGTHDAVERAISMVSE 281          
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 5.230e-13
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 0
Query:  231 INVPQNVVGWVIGKAGIRIIQLQERTNAAMWIDQNFPNGHARKLHIYGKSS-EVEAAVAEVEYLIKSAPINNARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLIGKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE 400
            +++   VVGWVIG++G  I +++ R+   MW+DQ        KL+I G     + AA A V  LI  AP+N        +  G              +     +H   M+ CP  L+GLLIG+ G+TI +IK +S ANV +NQ   + +     ++G P SV L VAM+E+
Sbjct:   36 MDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQK-----DLKLYITGADMPRIHAAAALVGDLISKAPVN-------VNSAG--------------VEDEVTSH---MIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVI-----VSGIPQSVRLGVAMIED 172          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1051.30.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI19_ECTSI1.480e-9746.94Circadian RNA-binding protein CHLAMY 1 subunit C1 ... [more]
A0A6H5KMM6_9PHAE1.290e-9346.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2TVW3_9EUKA1.570e-2035.83Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
I0ZA07_COCSC1.100e-1534.33Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
A0A836BSU0_9CHLO5.400e-1533.33WW domain-containing protein n=1 Tax=Edaphochlamys... [more]
A0A8J9SGT6_9CHLO1.960e-1431.94Probable far upstream element-binding protein 1 at... [more]
A0A835SK22_9CHLO2.490e-1435.09WW domain-containing protein n=2 Tax=Chlamydomonas... [more]
A0A2Z5X880_9CHLO6.780e-1433.71C1, subunit of the circadian RNA-binding protein C... [more]
A0A2Z5X8C8_9CHLO3.600e-1332.58C1, subunit of the circadian RNA-binding protein C... [more]
D7FHT5_ECTSI5.230e-1333.92SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..191
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 715..761
e-value: 8.8E-11
score: 41.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 558..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..100
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 227..475
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 334..398
score: 13.313302
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 226..290
score: 12.768259
NoneNo IPR availableCDDcd09487SAM_superfamilycoord: 625..678
e-value: 4.13629E-5
score: 39.9153
NoneNo IPR availableCDDcd00105KH-Icoord: 339..399
e-value: 3.27325E-14
score: 65.6591
NoneNo IPR availableCDDcd00105KH-Icoord: 228..279
e-value: 1.94367E-5
score: 41.0063
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 711..761
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 719..755
e-value: 8.1E-4
score: 28.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 719..756
score: 10.217316
IPR004087K Homology domainSMARTSM00322kh_6coord: 333..403
e-value: 5.7E-11
score: 52.4
coord: 225..295
e-value: 2.4E-5
score: 33.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 697..767
e-value: 1.2E-14
score: 55.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 222..297
e-value: 1.8E-12
score: 48.8
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 334..407
e-value: 2.7E-14
score: 54.5
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 226..300
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 328..404
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 339..400
e-value: 8.4E-13
score: 47.9
coord: 230..291
e-value: 2.0E-9
score: 37.2
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 624..684
e-value: 3.3E-9
score: 38.4
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 621..679
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 625..678
e-value: 1.0E-5
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1051contigA-nodosum_M_contig1051:212707..226568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1051.30.2mRNA_A-nodosum_M_contig1051.30.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1051 211735..228165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1051.30.2 ID=prot_A-nodosum_M_contig1051.30.2|Name=mRNA_A-nodosum_M_contig1051.30.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=769bp
MDHSDIKKWVMSVAACETVATLPEIRRYFHGRVEKVIIDACLVQLHHNFR
DTVMACAEFMSIIVPPDLKANIGVKSNEKEQRKEAKQPGEAGAAASLSPD
KKEEDDYVAGGYLKPGDSDFDFIEHPLEKRANKARENDCKDVKELQDILD
EAKGQPGLARTRKLVSKMLKRVKAELEERKQLRQLSKLQEKPLATKEISQ
KLHPAYASNGPGYASFKPPSIPDGKQPEATINVPQNVVGWVIGKAGIRII
QLQERTNAAMWIDQNFPNGHARKLHIYGKSSEVEAAVAEVEYLIKSAPIN
NARRVIPTSEVGAPSCLPPGHPDIPPISSASKTHAHKMVLCPHSLVGLLI
GKKGATIMKIKNDSNANVEVNQNFPEGVPREVDITGSPGSVDLAVAMVEE
AREENCAAFGCLSAHSTSTTAFAQPPAPSSTGPVLGFGSSVPMVRQGARR
DENATVTRSPLTPVDAMARDFGDLGGLGHGATSTVYSGMNGAAAAGLQDV
DTRSAIEKLHPSIQGGASSAGKTHALSPLLQANGAKVHGSYLDQQGYRLW
HQHLHYQHQHQQHPLYPPPPQQQYQPQHPPYPQPLQQQPTASEANGARGG
GGGGLGENAGNDELEVAQDSFPFGSIKELLASVGFPLLLSNFLEQEFDLK
SVSLMQDKDFEEIKVPKGPQLKIQRALRAAGIGSAESKSSHVSAAVATPN
VATEEKDEEKMPYSEDRCCVICLERKIEVIFLDCGHQICCKQCGDPQVGK
DCPMCRTPVAKAVRFYTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR004087KH_dom
IPR013083Znf_RING/FYVE/PHD
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR013761SAM/pointed_sf
IPR001660SAM