prot_A-nodosum_M_contig1047.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1047.4.1
Unique Nameprot_A-nodosum_M_contig1047.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length605
Homology
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: D7FLU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU1_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 1.300e-126
Identity = 203/336 (60.42%), Postives = 262/336 (77.98%), Query Frame = 0
Query:  271 LVVRDGMDLVEVTSLVQEVLERVSDTERELRRLRKEGSLPKARSSVAERARKFVIDKRATMIGAAFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQ-GTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKISKEAADLDRQYKIRAKAVRARKRVTKFSKQARSSAAKEMNKFANTATDWGNSRLKEWGVVVEKPDDVGRKRFRLRLPRKWRRDG-NAAKRPLGLSFGLGGIFGGEKRSFYSPPPAGGTRKPGYRGDPVIPARIRHIFMTPKQIREERLRKYRVGFMGMQPPRRFDRND 604
            +V +  M+L E++ ++  VLER+S+TEREL+R++KEGSL K   S   R RKF+ID RA M+GAAFAG +AGMIVGWSVLPNLWLVGGV GA++ + LSR+  GTVG++C+TCGIQVAL+YKD+RDWWEQTVFLYKTGKLSY YW+GFE+YD+AWGL+ KY   V K+SKEA +LDRQYKIR K +RA KR+T+ S+Q  SSA +E+   A +A+DWG ++L++WG++ +  D   RKR +L    K ++     AKRPLG+S  L G+FG   RS YS PPAGGTR   ++ DP+IPARIRH+FMT KQIR+ERL+KYRVGFMGM+ PR FD++D
Sbjct:  106 VVAKGDMELAEMSEMMSLVLERLSETERELKRIQKEGSLAKTNRSEV-RDRKFIIDTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSSTGTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRGFERYDQAWGLSAKYTETVAKVSKEALELDRQYKIRQKTLRAGKRLTRISRQVGSSAKREVTTLAGSASDWGGNKLRKWGLMGDDLDPR-RKRTKLTEILKLKKSKVGGAKRPLGVSVVLDGMFGERSRSMYSAPPAGGTRIKTHKADPIIPARIRHMFMTKKQIRDERLQKYRVGFMGMRVPRSFDKDD 439          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A6H5KZI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI1_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 3.490e-126
Identity = 202/335 (60.30%), Postives = 259/335 (77.31%), Query Frame = 0
Query:  271 LVVRDGMDLVEVTSLVQEVLERVSDTERELRRLRKEGSLPKARSSVAERARKFVIDKRATMIGAAFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQ-GTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKISKEAADLDRQYKIRAKAVRARKRVTKFSKQARSSAAKEMNKFANTATDWGNSRLKEWGVVVEKPDDVGRKRFRLRLPRKWRRDGNAAKRPLGLSFGLGGIFGGEKRSFYSPPPAGGTRKPGYRGDPVIPARIRHIFMTPKQIREERLRKYRVGFMGMQPPRRFDRND 604
            +VVR  M+L E++ ++  VLER+S+TEREL+R++KEGSL K   S   R RKF+ID RA M+GAAFAG +AGMIVGWSVLPNLWLVGGV GA++ + LSR+  GTVG++C+TCGIQVAL+YKD+RDWWEQTVFLYKTGKLSY YW+ FE+YD+AWGL+ KY   V K+SKEA +LDRQYKIR K +RA KR+T+ S+Q  SSA +E+   A T +DWG ++L++WG++ +  D   ++     L +  +R    AKRPLG+S  L G+FG   RS YS PPAGGTR   Y+ DP+IPARIRH+FMT KQIR+ERL+KYRVGFMGM+ PR FD++D
Sbjct:  247 VVVRGDMELAEMSEMMSLVLERLSETERELKRIQKEGSLAKTNRSEV-RDRKFIIDTRAKMLGAAFAGSVAGMIVGWSVLPNLWLVGGVTGALAFAALSRSSTGTVGTICSTCGIQVALMYKDVRDWWEQTVFLYKTGKLSYTYWRVFERYDQAWGLSAKYTETVAKVSKEALELDRQYKIRQKTLRAGKRITRISRQVGSSAKQEVTTLAGTVSDWGGNKLRKWGLMGDDLDPRRKRNKLTELLKLKKRGDGGAKRPLGVSVVLDGMFGERSRSMYSAPPAGGTRIKTYKADPLIPARIRHMFMTKKQIRDERLQKYRVGFMGMRVPRSFDKDD 580          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A836CAQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 8.280e-22
Identity = 72/186 (38.71%), Postives = 102/186 (54.84%), Query Frame = 0
Query:  271 LVVRDGMDLVEVTSLVQEVLERVSDTERELRRLRKE-GSLPKARSSVAERARKFVIDKRATMIGAAFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQGTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKISKEAADLDRQYKIRAKAV 455
            LVV  GM   + ++L+QEVLER++  E++L++++K+ G       S   R+RKFVIDKRAT                                                      +VAL+YKDI+D+++QTVFLYKTGKLSY YW  ++ YD+ + LT KYNG + ++SKEA ++DRQYKIR KA+
Sbjct:   88 LVVHKGMTDKDTSALLQEVLERLNMAEKDLKQMKKKMGENGIEVPSGKGRSRKFVIDKRAT------------------------------------------------------KVALVYKDIKDFYDQTVFLYKTGKLSYQYWSMWDDYDRRFQLTAKYNGFMARVSKEAYEIDRQYKIRNKAL 219          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A7S3YL52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL52_HETAK)

HSP 1 Score: 92.0 bits (227), Expect = 2.580e-17
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = 0
Query:  333 GAAFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQGTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKISKEAADLDRQYKI 450
            G+  A  L GMI+G SV  NLWLVG  AGA   +  ++  G +G      G+ VAL Y D+  +++ TV+LYKTG L   Y+K FE+ DK + + +KY  AV +I  E A +DR++ I
Sbjct:   50 GSVAACTLIGMIIGKSVSSNLWLVGAAAGAYFGTITAKQSGLIGVRVRKLGVWVALRYIDVAKFYQDTVYLYKTGVLGATYYKKFEELDKQYKIVDKYESAVARIQGEYAKVDREFDI 167          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A7S4A9H9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9H9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.940e-13
Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  333 GAAFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQGT----------VGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKI 437
            G + AGC  GM++G ++LPNLWLVGG+ G+     +++   T          VG    +CG Q+A  Y  + D+W+   FLYKTG+LSY Y+K +E  DK + +  K + A N++
Sbjct:  250 GTSVAGCFLGMVIGITILPNLWLVGGILGSFYGYEITKIVSTEDNNLKDSNIVGKFLISCGRQLARAYLQLVDYWKGLWFLYKTGQLSYEYYKTYENLDKKFAVQSKID-AWNRV 363          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A482S7I6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7I6_9ARCH)

HSP 1 Score: 72.8 bits (177), Expect = 4.000e-10
Identity = 33/93 (35.48%), Postives = 56/93 (60.22%), Query Frame = 0
Query:  339 CLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQGTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYN 431
            C  GM++G+S+L  LWL+GG+AGA   +++       G      G+++A +  D+++ + Q V  Y+TGKL+Y   K +E YD+ + +T K N
Sbjct:  172 CFLGMLIGFSLLDKLWLLGGIAGACWAASIVHRNSPTGRFARKIGVEIARMLIDLQEKYNQAVIFYRTGKLAYVSSKIWENYDQKFSITRKVN 264          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A1E7FW04_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW04_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 5.880e-7
Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 0
Query:  324 VIDKRATMIGAAFAGCLAGMIVGWSVLPNLWLVGGVAGAV------SCSTLSRTQ---------GTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKI 437
            ++ +R    G   AG  +G I+G ++LPNLWLVG  +GA+        + LS TQ           +       G Q+A IY    D+ +   FLYKTG+LSY Y+K +E  D  + +  K + A N++
Sbjct:  226 ILSERDIQRGTTIAGSFSGFILGATILPNLWLVGFFSGAIYGYEITKENPLSITQQGQIHTIEPNIIARFLIAFGKQLAKIYLQFADYGKAMWFLYKTGQLSYEYYKTYETLDNKFAIQNKVD-AWNRV 353          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A7S0Y8S1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8S1_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 4.940e-6
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  335 AFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRT---------QGTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKI 437
            A   C  GMI+G ++LPNLWLV  VAG +    +++           G    L +T   ++A  Y+   D  +   FLYKTG+LSY Y+K +E  DK + + +K + A N++
Sbjct:  191 AIISCFVGMIIGITILPNLWLVSMVAGVLYGYEITKDIAEYDPGEKNGLANFLIST-ATRLAKAYRKTADGLKALWFLYKTGQLSYEYYKTYETMDKKFAIQKKVD-AWNRV 300          
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Match: A0A1Z5JZL2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZL2_FISSO)

HSP 1 Score: 59.3 bits (142), Expect = 1.700e-5
Identity = 35/107 (32.71%), Postives = 55/107 (51.40%), Query Frame = 0
Query:  325 IDKRATMIGAAFAGCLAGMIVGWSVLPNLWLVGGVAGAVSCSTLSRTQ--GTVGSLCATCGIQVALIYKDIRDWWEQTVFLYKTGKLSYAYWKGFEKYDKAWGLTEK 429
            +D  A   G + AG L GMI+G S+LPNLWL G + GAV    ++          +    G ++A     + D      F+YKTG+LSY Y++ +   D+ + + +K
Sbjct:  303 LDLNALKKGNSVAGLLLGMILGISILPNLWLFGSIVGAVYGYNITPLDELNVASRIVTQLGRKIARASLSVYDSANTLFFMYKTGQLSYEYYQRYAALDQKFAIQDK 409          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1047.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FLU1_ECTSI1.300e-12660.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZI1_9PHAE3.490e-12660.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAQ6_9STRA8.280e-2238.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3YL52_HETAK2.580e-1742.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4A9H9_9STRA3.940e-1338.26Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A482S7I6_9ARCH4.000e-1035.48Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A1E7FW04_9STRA5.880e-733.33Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S0Y8S1_9STRA4.940e-634.82Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A1Z5JZL2_FISSO1.700e-532.71Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1047contigA-nodosum_M_contig1047:17253..27808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1047.4.1mRNA_A-nodosum_M_contig1047.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1047 16404..27816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1047.4.1 ID=prot_A-nodosum_M_contig1047.4.1|Name=mRNA_A-nodosum_M_contig1047.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=605bp
MLWPRRNIEILGVILLIVSSAGGFVTTTQQQTPRRYVPPRQVRRHGYSRG
TPGVTTTSGTTCLLGCATNSNGGALSSNNYIARLARFQSLGLQDEVLGSS
SFCGASQRRYLHPGSRATLLMMSPPLPSQTHHSQGDSARNGETGAKKEPL
VRPPSRKINAWHLPGVPVVPKAAESAANVTASPNSTSPITTSNISKTVDV
NAQNSRSLKTASAHTTSDRHAVPVSAGAIGTKTSNVTAEVSPGEPIPRKK
EKKLKRLPRSPVPGRVRRRPLVVRDGMDLVEVTSLVQEVLERVSDTEREL
RRLRKEGSLPKARSSVAERARKFVIDKRATMIGAAFAGCLAGMIVGWSVL
PNLWLVGGVAGAVSCSTLSRTQGTVGSLCATCGIQVALIYKDIRDWWEQT
VFLYKTGKLSYAYWKGFEKYDKAWGLTEKYNGAVNKISKEAADLDRQYKI
RAKAVRARKRVTKFSKQARSSAAKEMNKFANTATDWGNSRLKEWGVVVEK
PDDVGRKRFRLRLPRKWRRDGNAAKRPLGLSFGLGGIFGGEKRSFYSPPP
AGGTRKPGYRGDPVIPARIRHIFMTPKQIREERLRKYRVGFMGMQPPRRF
DRND*
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