prot_A-nodosum_M_contig997.21.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig997.21.2
Unique Nameprot_A-nodosum_M_contig997.21.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length240
Homology
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: D7FI80_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI80_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 8.990e-119
Identity = 184/235 (78.30%), Postives = 201/235 (85.53%), Query Frame = 0
Query:    6 RWRTISTL-LSLLNLLATNACASGIAPSASAATELTVRVRMTDGSVKRVQATPRDTIEDVCERLGCDIEAGVAVEAEQEEAVEASCTLKELSVGHGGWLYMLRDPAKAGVDTAAAIRRMREARKRATRGGGVKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRNA 239
            RWR+   L +S+L LL  NA  S  A +A  ATELTVRVRM+DGSVKRVQA  RDT+EDVCERLGC+ EAGVA+E + E AVE S TLKELSVGHGGWLYMLRDP   G DTAAAIRRM+EAR RA +GGGVKEVKTL ALQQELKAAKGMLVVVDFYADWCGPCKQIAP + EM+KEFPKAV LKVNVDTN+E AQKYAVQSMPTFVM+KNGKKVDE+KGAG DALRQ+ISRNA
Sbjct:    5 RWRSAEMLAVSVLGLLTFNAHPSTAAAAAPTATELTVRVRMSDGSVKRVQAQARDTVEDVCERLGCEPEAGVAIEEDPEAAVEVSSTLKELSVGHGGWLYMLRDPDDPGADTAAAIRRMKEARTRAIKGGGVKEVKTLKALQQELKAAKGMLVVVDFYADWCGPCKQIAPVYKEMAKEFPKAVLLKVNVDTNKETAQKYAVQSMPTFVMIKNGKKVDELKGAGEDALRQAISRNA 239          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: A0A836CNH4_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH4_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.360e-71
Identity = 113/205 (55.12%), Postives = 149/205 (72.68%), Query Frame = 0
Query:   31 PSASAATELTVRVRMTDGSVKRVQATPRDTIEDVCERLGCDIEAGVAVEAEQEEAVEASCTLKELSVGHGGWLYMLRDPAKAGVDTAAAIRRMREARKRATRGGGVKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSI 235
            P+A A++ L +RVR+ DGSVKRV A+P D++ DVCE++ CD E GVA +A+    VE + ++KEL + +G WLY+ RDPA+AG   A AI RM++ R+R  +GGGV E  T+  L QE+K A  MLVVVDF+ADWCGPCK IAP +  M++EFPKAV LKVNVD N+ A+++Y+V SMPTFV LK G+ VD +KGA    LR  I
Sbjct:   37 PAAGASSGLVLRVRLPDGSVKRVDASPSDSVADVCEKIDCDYEHGVATDADFANCVEGTSSVKELKLANGAWLYLRRDPAEAGRSNAEAIMRMKKRRERELKGGGVVECLTVAKLDQEIKEAGNMLVVVDFFADWCGPCKAIAPKYKAMAEEFPKAVLLKVNVDKNKAASERYSVSSMPTFVFLKGGRVVDTLKGADEGTLRTKI 241          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: A0A7S2UWJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWJ8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.240e-40
Identity = 84/203 (41.38%), Postives = 122/203 (60.10%), Query Frame = 0
Query:   38 ELTVRVRMTDGSVKRVQATPRDTIEDVCERLGCDIEAGVAVEAEQEEAVEASCTLKELSVGHGGWLYMLRDPAKAGVDTAAAIRRMREARKRATRGG-GVKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRNA 239
            +L VRV+M +G +KRV+A P  TI D+ +  G + +  ++++ E+ E  + S  +K + V HG  LY  +     G D+A+   R+   + R  R G  V     +      +K A   L+VVDFYADWCGPCKQIAP F +M ++  KA FLKVN D N+ A+QKY V +MPTFV +KNGK V  ++GA   A+ Q+I++ A
Sbjct:   37 KLIVRVKMPNGVIKRVEAKPSHTINDIKDMAGLERKKRLSLDEERTELTQGSDVIKRIGVKHGDILYA-KMADMDGSDSASLQARLASTKTRRNRAGTSVPHADNMKDFDMAVKRAGSRLLVVDFYADWCGPCKQIAPVFEKMYQDNLKADFLKVNTDRNKAASQKYKVSAMPTFVFIKNGKVVKTLQGANEGAISQAINQYA 238          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: A0A7S2B170_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B170_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.290e-29
Identity = 67/129 (51.94%), Postives = 83/129 (64.34%), Query Frame = 0
Query:  110 AKAGVDTAAAIRRMREARKRATRGGG-VKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEF-PKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSIS 236
            AKAG+ T + I  +    K    G G VKE KT     + LKAA   LVVVDF+A WCGPCKQIAP F E+S  +  K  FLKV+VD  +  AQKY V SMPTF+ +KNGK+VD++ GA  D ++Q IS
Sbjct:   17 AKAGLGTTSKIIDVDTLEKMGGGGKGKVKECKTEAEFAKALKAAGKKLVVVDFFATWCGPCKQIAPKFAELSGSYGTKVKFLKVDVDQAKALAQKYQVSSMPTFLFVKNGKQVDKLAGANIDTIKQKIS 145          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: UPI000719C0F6 (thioredoxin-2-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C0F6)

HSP 1 Score: 115 bits (289), Expect = 1.550e-29
Identity = 59/103 (57.28%), Postives = 68/103 (66.02%), Query Frame = 0
Query:  136 VKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRN 238
            VKE+ +   L+  LK A G LVV+DFYADWCGPCKQIAP    MS E    VFLKVNVD   E A  Y V +MPTFV LK+GKKVD + GA  D L+  I+ N
Sbjct:    4 VKEINSPTELETALKEAGGKLVVIDFYADWCGPCKQIAPKILAMSDELSDVVFLKVNVDDCDEIAADYDVSAMPTFVFLKDGKKVDNLIGANVDQLKSKIASN 106          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: A0A6A5BVG0_NAEFO (Thioredoxin n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BVG0_NAEFO)

HSP 1 Score: 112 bits (280), Expect = 3.160e-28
Identity = 54/103 (52.43%), Postives = 74/103 (71.84%), Query Frame = 0
Query:  136 VKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRN 238
            V +V TL  L+ ++K   G LVV+DF+A+WCGPCK+IAP   E SK++P  +FLKV+VD N EAA +YAV++MPTFV +KNG K++ + GA   AL   I +N
Sbjct:    2 VHKVDTLAELKDKIKNHNG-LVVIDFFAEWCGPCKRIAPKIEEWSKKYPTVLFLKVDVDVNDEAASEYAVEAMPTFVFVKNGSKIETVVGANETALVNLIEKN 103          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: A0A5J4NJ35_9TREM (Thioredoxin n=2 Tax=Paragonimus TaxID=34503 RepID=A0A5J4NJ35_9TREM)

HSP 1 Score: 111 bits (278), Expect = 6.490e-28
Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 0
Query:  136 VKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRN 238
            V+++ T   + + ++  K  L+V+DFYADWC PC+ IAP F  +S EFP A F+KVNVD N E +Q + V+ MPTFV LKNG KV+E  GA  + LRQ+I ++
Sbjct:    2 VQKLDTKPKVDEFIEQNKDKLIVIDFYADWCPPCRNIAPKFVSLSTEFPNAAFIKVNVDENNETSQAFNVRCMPTFVFLKNGSKVEEFSGADENKLRQTIMKH 104          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: UPI0008F9902C (thioredoxin-2-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9902C)

HSP 1 Score: 110 bits (275), Expect = 1.930e-27
Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 0
Query:  136 VKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRNA 239
            V +VK    LQ +L  A+  LVV+DF+A WCGPCK IAP   E++KEFP  VFLKV+VD   E A +Y + SMPTFV LKN  KVD   GA A+ ++ +I ++A
Sbjct:    2 VYQVKDSADLQTKLSEAESKLVVIDFFATWCGPCKMIAPVLEELTKEFPNVVFLKVDVDECEEIAAQYEITSMPTFVFLKNKNKVDVFAGAHAEKVKATIQKHA 105          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: UPI0004A557C6 (hypothetical protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=UPI0004A557C6)

HSP 1 Score: 110 bits (275), Expect = 1.320e-26
Identity = 51/104 (49.04%), Postives = 75/104 (72.12%), Query Frame = 0
Query:  136 VKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRNA 239
            V  V +L AL + L  A    V++DFYA WCGPCK IAPA+ +++ ++ +AVFLKV+VD  R+ A KY+V +MPTF++LKN  KVD+++GA   AL ++I ++A
Sbjct:    9 VTPVSSLAALDRILDKAASRAVIIDFYATWCGPCKVIAPAYRDLASKYRQAVFLKVDVDQARDVASKYSVSAMPTFIVLKNRAKVDQVRGADKAALERAIKKHA 112          
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Match: A0A6U0UC80_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UC80_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.690e-26
Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0
Query:  134 GGVKEVKTLGALQQELKAAKGMLVVVDFYADWCGPCKQIAPAFTEMSKE--FPKAVFLKVNVDTNREAAQKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRN 238
            G V+EV TL   +  L  A G LVVVDF A WCGPC+QIAPA+ EMS+E  F   VFLKV+VD N E AQ+Y VQSMPTFV +K  ++V    GA A+ +R +I  N
Sbjct:  118 GAVQEVDTLEEFEAILGEAGGSLVVVDFSATWCGPCRQIAPAYAEMSEEDEFDNVVFLKVDVDENAETAQEYEVQSMPTFVFIKEEEEVARFSGADAERVRSTIREN 224          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig997.21.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI80_ECTSI8.990e-11978.30Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A836CNH4_9STRA1.360e-7155.12Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S2UWJ8_9STRA1.240e-4041.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2B170_9STRA1.290e-2951.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
UPI000719C0F61.550e-2957.28thioredoxin-2-like n=1 Tax=Priapulus caudatus TaxI... [more]
A0A6A5BVG0_NAEFO3.160e-2852.43Thioredoxin n=2 Tax=Naegleria TaxID=5761 RepID=A0A... [more]
A0A5J4NJ35_9TREM6.490e-2849.51Thioredoxin n=2 Tax=Paragonimus TaxID=34503 RepID=... [more]
UPI0008F9902C1.930e-2751.92thioredoxin-2-like n=1 Tax=Bemisia tabaci TaxID=70... [more]
UPI0004A557C61.320e-2649.04hypothetical protein n=1 Tax=Mixia osmundae (strai... [more]
A0A6U0UC80_9STRA1.690e-2655.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 204..215
score: 34.49
coord: 165..174
score: 67.89
coord: 157..165
score: 60.86
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 117..239
e-value: 6.2E-37
score: 128.3
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 146..228
e-value: 2.9E-23
score: 79.8
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 157..225
e-value: 2.1E-10
score: 37.2
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 134..236
NoneNo IPR availablePANTHERPTHR46115THIOREDOXIN-LIKE PROTEIN 1coord: 134..236
NoneNo IPR availableCDDcd02947TRX_familycoord: 145..235
e-value: 6.80528E-38
score: 125.748
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 146..236
e-value: 1.3E-27
score: 95.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 117..239
score: 14.732261
IPR005746ThioredoxinTIGRFAMTIGR01068TIGR01068coord: 152..237
e-value: 1.2E-28
score: 97.2
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 158..176
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 123..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig997contigA-nodosum_M_contig997:161742..175336 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig997.21.2mRNA_A-nodosum_M_contig997.21.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig997 161327..175362 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig997.21.2 ID=prot_A-nodosum_M_contig997.21.2|Name=mRNA_A-nodosum_M_contig997.21.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=240bp
MMAVSRWRTISTLLSLLNLLATNACASGIAPSASAATELTVRVRMTDGSV
KRVQATPRDTIEDVCERLGCDIEAGVAVEAEQEEAVEASCTLKELSVGHG
GWLYMLRDPAKAGVDTAAAIRRMREARKRATRGGGVKEVKTLGALQQELK
AAKGMLVVVDFYADWCGPCKQIAPAFTEMSKEFPKAVFLKVNVDTNREAA
QKYAVQSMPTFVMLKNGKKVDEIKGAGADALRQSISRNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR005746Thioredoxin
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf