prot_A-nodosum_M_contig996.48.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig996.48.1
Unique Nameprot_A-nodosum_M_contig996.48.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length321
Homology
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BLAST of mRNA_A-nodosum_M_contig996.48.1 vs. uniprot
Match: D7G1P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P7_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 9.880e-50
Identity = 124/256 (48.44%), Postives = 147/256 (57.42%), Query Frame = 0 
Query:   69 VVRRRLSRLGMTEQGEGFHDPYGDESQEQEPSWGRGVGAGSEGIIPVQPYREEHTAGGRKFSELLARAKGKNPARSFQ---AAPRHPVPPEGPIDYDQDSQWEDQLIGSPNLPDPPLRNEMPGLRLSPEIDYDGLEEASPGNLGSGGDGGDRFQRMMQQAQTNDQRQAAGIPPVSVQNTRPW---RADARPLLLSKEEKERALRAAVERQQNMMAKARGINLDDPTLEGTELAKKRALSRASGEGIGWLAAGDIPT 318
            V R  L  L M + GEG    +G E  E  P+   G G  S  + P  PYREEHT GG +F ELLARA G+          A PR  +PPEG  DYD D+QWE+Q IGSP++PDPPLR  MPGL L PE+DY G  EA                        ND RQ AG+ P +   +      RA A    +SKEEKERA++AAVERQQ MMAKARGI+LDDPTLEG ELA+K+ALSRA  E     A G +P+
Sbjct:    3 VSRDTLPALSMADDGEGAL--FGPEESEGGPA---GPGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAPXXXXXXXAKPRRALPPEGAPDYDDDNQWEEQAIGSPDVPDPPLRENMPGLDLGPELDYGGGGEAXXXXXXXX-----XXXXXXXXXXXNDDRQEAGMAPRASPRSPQEVAKRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEA---QAGGYVPS 245
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.48.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1P7_ECTSI9.880e-5048.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig996contigA-nodosum_M_contig996:272282..274086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig996.48.1mRNA_A-nodosum_M_contig996.48.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig996 272166..274163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig996.48.1 ID=prot_A-nodosum_M_contig996.48.1|Name=mRNA_A-nodosum_M_contig996.48.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=321bp
MRTVVVHANTMTRKHNRGRIILILQAWLVPCHGFRSTSCLQTSHVALRAL
QRHAPLFPHDQRLRTLSDVVRRRLSRLGMTEQGEGFHDPYGDESQEQEPS
WGRGVGAGSEGIIPVQPYREEHTAGGRKFSELLARAKGKNPARSFQAAPR
HPVPPEGPIDYDQDSQWEDQLIGSPNLPDPPLRNEMPGLRLSPEIDYDGL
EEASPGNLGSGGDGGDRFQRMMQQAQTNDQRQAAGIPPVSVQNTRPWRAD
ARPLLLSKEEKERALRAAVERQQNMMAKARGINLDDPTLEGTELAKKRAL
SRASGEGIGWLAAGDIPTPL*
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