prot_A-nodosum_M_contig996.42.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig996.42.2
Unique Nameprot_A-nodosum_M_contig996.42.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length759
Homology
BLAST of mRNA_A-nodosum_M_contig996.42.2 vs. uniprot
Match: A0A6H5JSB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB3_9PHAE)

HSP 1 Score: 547 bits (1410), Expect = 3.700e-180
Identity = 379/833 (45.50%), Postives = 469/833 (56.30%), Query Frame = 0
Query:    2 GLLLGSLEESSSPSSLNGSDI---------DPESPFPTSRDSRGGSRRVSREATLSERLVLEMAEIFSPKELHIIALEHLHAYSGERTVRAILTVLRRSTERMPLVQRAKFLGAAMQPALRATRQMAEERAGLETRRAAATGGKSPPNRNVSPDELHDESQNESRRGKNSASAANGERQHLLMEEEDLPSYEAYEAAAVAANAAVDFVGPLLEQTSADRV-----------RALNEEAVVPAADRAGSTAGTTVNGVAGILAASDRSLVAYLGFALAALEAASETSACVAXXXXXXXXXXXXXXXXXXXATALARAEERMVALVMGAPAIDLRFILLHGCRLSYANLIKRRQSEREGVDEETEHVKQTAPRRGSARLGELALSGAMPWTLRGVSCLAHLVACHPKLRDRWLPLVWSRGTERRLFLPHAQELMRARSKRVASKGLELTCFVAERLGRHPDEAGAFALEWQPAEETNDDA---------------------WNH-----------------------------------RDDDRALEDREASSWRRVVDGVAHEGTRCRRLRGRRHFKPFYLDLADFLQVLIDVMVSCAVPRLRARGHSAVSAFLSAADEASRFRVLKRLIERCPWPNATGLLLDTFRREIDRAFR-CASNPPSPAGVTEKESCSACYCAQGHSRSLLENGDRNELDRAASVDAGPRSATSPFASAQGGKFVREQLRRACRKGPPLSLLMDMDSRTGGLALARYAHALDRLGGSGXXXXXXXXXXXXXXQLELRRPDILRETVLLVQGLLDDLQGATVTSKGAGPEYFRLFILEDACQQCLQELQ 757
            GL++G LE  ++ +S N SD          D      TSRD+          A LSERL L MAEIFSPKELH++ALEHLHAY+  RT+R +LT+LRRST++M   +R KFL A+++PAL AT+     R GL      A  G +P    + P +      +E                 L   +ED+PS  AY+AAA AA  A DF+GPL+EQ SA++            R     A    A  AG +     +G    ++ASD SL AY+GFAL+ALE A ETS C  XXXXXXXXXX          + LARA+ER+V +V+ +P +DLRF+LLHG R+S+A+ +KRR+   EG  E+ E     A   G+  LGE A++GA+PWTLRGVS LA+LVAC P+LRD+WLPLVWSR TERRLFLPHA+ LMR RSKRVA+KGLEL CFVAERLG  PD  GAFA +W+P +E  D A                     + H                                   R D  A + R+A +    +    +  +R      RR F P +LDLA FLQVL+DVMVSC +P LR RGH+A+ A L AADEASRFRVL+RL+E CPWPNA GLLLD FRREIDRA R C                                                 S++SPFASA  G  V EQLRRACR+GP  SL+ DMDSRTGGLALARYAH LD +GG+               +LELR P  L +  LLVQGLLD+L+GA +T+  AGPE+FRLFILEDA QQCLQEL+
Sbjct:   83 GLVVGCLERFATSASSNNSDSITGTFEKSSDEAETLTTSRDADDC-------AALSERLALAMAEIFSPKELHLMALEHLHAYTKARTLRVVLTILRRSTQQMVTARRWKFLEASLRPALEATK-----RVGL-----VAAAGDAPAEPGL-PQKSSGSDADEXXXXXXXXXXXXXXXXXLPTADEDMPSRAAYDAAASAAETAADFIGPLMEQASAEQALLAVSRVPTAGRGEGRPAAAVVATSAGGSGRAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCCTXXXXXXXXXXGSEDNPPARES-LARAQERLVGIVVDSP-LDLRFVLLHGYRVSFASGVKRRRKRSEGGGEKGESHLPAAKLGGAVGLGEAAINGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEALMRDRSKRVANKGLELACFVAERLGGFPDRTGAFAFDWEPGDEEIDGAGDDXXXXXXXNGGGREEAHTPYGHTRTSAHNYEFYGCPDLLSHRYFTIFRPPPTPFHPFRRDVAAWQQRDADAGSSTISENTNPSSR------RRLFDPHHLDLAGFLQVLVDVMVSCPLPGLRTRGHAALMALLGAADEASRFRVLRRLVELCPWPNARGLLLDAFRREIDRALRQCGIEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSSPFASALAGDVVCEQLRRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGA-RGGSGRAEAGAAWGRLELREPKKLLQNKLLVQGLLDELRGAVITADNAGPEHFRLFILEDAAQQCLQELE 888          
BLAST of mRNA_A-nodosum_M_contig996.42.2 vs. uniprot
Match: D7G1P6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P6_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 1.400e-145
Identity = 316/724 (43.65%), Postives = 390/724 (53.87%), Query Frame = 0
Query:   45 ATLSERLVLEMAEIFSPKELHIIALEHLHAYSGERTVRAILTVLRRSTERMPLVQRAKFLGAAMQPALRATRQMAEERAGLETRRAAATGGKSPPNRNVSPDELHDESQNESRRGKNSASAANGERQHLLMEEEDLPSYEAYEAAAVAANAAVDFVGPLLEQTSADRV-----------RALNEEAVVPAADRAGSTAGTTVNGVAGILAASDRSLVAYLGFALAALEAASETSACVAXXXXXXXXXXXXXXXXXXXATALARAEERMVALVMGAPAIDLRFILLHGCRLSYANLIKRRQSEREGVDEETEHVKQTAPRRGSARLGELALSGAMPWTLRGVSCLAHLVACHPKLRDRWLPLVWSRGTERRLFLPHAQELMRARSKRVASKGLELTCFVAERLGRHPDEAGAFALEWQPAEETNDDAWNHRDDDRALEDREASSWRRVVDGVAHEGTRCRRLRGRRHFKPFYLDLADFLQVLIDVMVSCAVPRLRARGHSAVSAFLSAADEASRFRVLKRLIERCPWPNATGLLLDTFRREIDRAFRCASNPPSPAGVTEKESCSACYCAQGHSRSLLENGDRNELDRAASVDAGPRSATSPFASAQGGKFVREQLRRACRKGPPLSLLMDMDSRTGGLALARYAHALDRLGGSGXXXXXXXXXXXXXXQLELRRPDILRETVLLVQGLLDDLQGATVTSKGAGPEYFRLFILEDACQQCLQELQ 757
            A LSE L L MAEIFSPKELH++ LEHLHAY+  RTVR +LT+LRRSTERM   +R+KFL A+++PAL+A +     R GL    AA      P  R  S                            L   + D+PS  AY+AAA AA  A DF+GPL+EQ SA+R            R     A    A   G +     +G    ++ASD SL AY+GFAL+ALE A ETS C  XXXXXXXXXX           +LARAEER++ +V+ +P +DLRF LLHGCR+SYA+ +KRR+ + EG  EE +     A   G+  L E A++GA+PWTLRGVS LA+LVAC P+LRD+WLPLVWSR TERRLFLPHA+ LMR RS+RVA+KGLEL CFVAERLG  PD +GA+A +W+P +E                          +DG   +        G               +VL+DVMVSC +P LR RGH+A+ A LS ADEASRFR+L+RL+E CPWPN                                                                                      L RACR+GP  SL+ DMDSRTGGLALARYAH LD +GG+               +L LR P  L +  LLVQGLLD+L+GA +T+  AGPE+FRLFILEDA QQCLQEL+
Sbjct:  128 AALSEGLALAMAEIFSPKELHLMTLEHLHAYTKARTVRVVLTILRRSTERMATARRSKFLEASLRPALKAAK-----RVGLVA--AAGDAPAEPGLRQKSSGSDXXXXXXXXXXXXXXXXXXXXXXXLLPTADGDMPSSAAYDAAASAAETAADFIGPLMEQASAERALLAVSGLPTAGRGEGRPAAAAVAXXXGGSGHAVGSGEKEGVSASDLSLAAYIGFALSALELAGETSVCX-XXXXXXXXXXTGSEDNPAAGESLARAEERLIGIVVDSP-LDLRFALLHGCRVSYASGVKRRRRKSEGGGEEGKSQLPAARLGGAVGLAEAAVNGALPWTLRGVSTLAYLVACEPRLRDKWLPLVWSRRTERRLFLPHAEVLMRDRSRRVANKGLELACFVAERLGGFPDRSGAYAFDWEPGDEE-------------------------IDGAGDDXXXXXXWNG-----------GGRQEVLVDVMVSCPLPGLRTRGHAALVAILSGADEASRFRLLRRLVELCPWPN--------------------------------------------------------------------------------------LLRACRRGPLASLMADMDSRTGGLALARYAHKLDAVGGA-RADSGRAEAGAAWGRLGLREPKKLLQNRLLVQGLLDELRGAVITANNAGPEHFRLFILEDAAQQCLQELE 719          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.42.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSB3_9PHAE3.700e-18045.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1P6_ECTSI1.400e-14543.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013877YAP-binding/ALF4/GlomulinPFAMPF08568Kinetochor_Ybp2coord: 507..584
e-value: 3.1E-8
score: 32.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..177
IPR019516Glomulin/ALF4PANTHERPTHR15430GLOMULINcoord: 352..677

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig996contigA-nodosum_M_contig996:258320..262544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig996.42.2mRNA_A-nodosum_M_contig996.42.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig996 257536..262544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig996.42.2 ID=prot_A-nodosum_M_contig996.42.2|Name=mRNA_A-nodosum_M_contig996.42.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=759bp
MGLLLGSLEESSSPSSLNGSDIDPESPFPTSRDSRGGSRRVSREATLSER
LVLEMAEIFSPKELHIIALEHLHAYSGERTVRAILTVLRRSTERMPLVQR
AKFLGAAMQPALRATRQMAEERAGLETRRAAATGGKSPPNRNVSPDELHD
ESQNESRRGKNSASAANGERQHLLMEEEDLPSYEAYEAAAVAANAAVDFV
GPLLEQTSADRVRALNEEAVVPAADRAGSTAGTTVNGVAGILAASDRSLV
AYLGFALAALEAASETSACVASSAAAAAHDSSAPGGGAPPATALARAEER
MVALVMGAPAIDLRFILLHGCRLSYANLIKRRQSEREGVDEETEHVKQTA
PRRGSARLGELALSGAMPWTLRGVSCLAHLVACHPKLRDRWLPLVWSRGT
ERRLFLPHAQELMRARSKRVASKGLELTCFVAERLGRHPDEAGAFALEWQ
PAEETNDDAWNHRDDDRALEDREASSWRRVVDGVAHEGTRCRRLRGRRHF
KPFYLDLADFLQVLIDVMVSCAVPRLRARGHSAVSAFLSAADEASRFRVL
KRLIERCPWPNATGLLLDTFRREIDRAFRCASNPPSPAGVTEKESCSACY
CAQGHSRSLLENGDRNELDRAASVDAGPRSATSPFASAQGGKFVREQLRR
ACRKGPPLSLLMDMDSRTGGLALARYAHALDRLGGSGSGNCSGRGRGGGA
GQLELRRPDILRETVLLVQGLLDDLQGATVTSKGAGPEYFRLFILEDACQ
QCLQELQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013877YAP-bd/ALF4/Glomulin
IPR019516Glomulin/ALF4