prot_A-nodosum_M_contig995.20.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig995.20.2
Unique Nameprot_A-nodosum_M_contig995.20.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1398
Homology
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BLAST of mRNA_A-nodosum_M_contig995.20.2 vs. uniprot
Match: D8LC76_ECTSI (Possible CAMK/ Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC76_ECTSI)

HSP 1 Score: 456 bits (1173), Expect = 3.170e-132
Identity = 775/1156 (67.04%), Postives = 872/1156 (75.43%), Query Frame = 0 
Query:  189 SQEGISGISAAAKATVKINTT----SSKFLKLFSPSNSAHQSHGVLATIHRKMNGTGWPRRGGWDSYLVRKSRAELDDGRVYGVKAKEGSVELLVLSSNNVCGRIPVEIARLSSLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPV--------AQASSKGSGIRKLDLGCNDLDEPLPDLTGLRDLQTLAMDNNKFYGGVGKGLTNTCPNLSKLHLQSNRLTGELPDSLGTLTKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLIVNCERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLKTSLGPHACGLKFSGNPRIVDSRAHFASTVAGIRRAEARSTSPAAVVSSPKDRLRRKKALLFVFRSVVRTLPTSRKLRRERDSSFVGEGSQRTHPSEMPKGPSNVGGSEHVLPSEPGSLMSHGETEGDVVGFS----GESLLKRDVEEGREEDSTLTMDVDDRGGLARPWVSSEDVFYFLLKAVVGNASVALDLVVAVRLLYTGCMWGFVGVVVWXXXXXXXXXXXXXXXXXXXXXXXLAAVGLALPLESRRCFYHSCESDLFQALQRVEWRWHAMIQFVMQLAAALACWNYAYSWLIIFWVSVVTKGIVVGVVSMQRLDDQRLLRAWANTAHQQHVSLVKPTWSSNLKANFLPWVQTSAWSRLILVGFHIAELSERTIPLSVLIVSLGRWVFLAPLAMMPGMLVRYVARRGRRVPGAG-GILSGVKKALRTSLALDSSFGAGTPEHLVALIATTVETVAFNSFAAGNPRAYPSFLGDAILSWCSMMLIYTWLVFLLEKLVPLG 1327
            S EG S +    K TV + +     S K+LKLF+PSNSAH ++ VLA +HR+MNGTGWPRRGGWDSYLVR+SRAELD+GRVYGV++KEGSVE L+LSSNNVCGRIP  IARL SL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FPV        +  ++ GSG+R L+LG N+++EP PDL G+  LQ+L +D N+ YGG+ + L  TCPNL +L LQ NRL+GE+P SLG LTKL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER+++NCE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLK SLGP+ACG K++GNPRIVDSR HFAS VAG+RRA              KD+ +++ +    F+ +  TL        E  S   G G Q                                   G   GFS    G   L R++  G  E+  L    DD  G +R W +SED  YFL K VVGNA V +DLV+A RL   GC WGF  V++W                       +AA+GLAL  ++R+CF+HSCESDLFQ LQ+VEWRWHAMIQ   QLAAAL+ W+           SV  K +VVGVVSMQRLDD+RL +     +      LV     S  +  FLPW++ SAW RLILVGFH+AE+ ERTIPL+ L+ +LG W+FLAPLAM PGM  RYVARR       G G++S VK AL+TSLALDS+FGAGTP H+ A I++T+ET+ F +  +  PR YP  L   +L W S++ ++TW++ +LE  +P+G
Sbjct:  399 SDEGRSMMEKLTKVTVAVESPATKISRKYLKLFAPSNSAHDTYKVLAALHRRMNGTGWPRRGGWDSYLVRRSRAELDEGRVYGVRSKEGSVEYLILSSNNVCGRIPPIIARLESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQFPVKFQFWFLRSSGATGGSGMRSLNLGSNEVEEPFPDLQGMEQLQSLVLDQNRMYGGLTESLAETCPNLYRLSLQKNRLSGEIPHSLGMLTKLEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMVMNCECLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPLFLKASLGPNACGFKWAGNPRIVDSRHHFAS-VAGLRRAGGNQADRGTATPPSKDQHQQQHSTNSSFKPIPLTLRVPDLPGCEEKSRLRGSGYQ----------------------------------VGAKGGFSQQLQGSEELDREIGIGVMEEDYLCEYGDDGTGASRLWANSEDFCYFLFKVVVGNALVLIDLVIAARLYLIGCKWGFFLVILWRVMSGMEGVLATHRLGYGRCWLPMAALGLALTWQARKCFHHSCESDLFQVLQQVEWRWHAMIQLSTQLAAALSWWDRGQVGYWYLLASVGMKALVVGVVSMQRLDDRRLTQDKERRSETPAAGLVP----SVFRTRFLPWLRDSAWPRLILVGFHVAEVCERTIPLASLVAALGGWMFLAPLAMAPGMCARYVARRALVSRAKGDGVVSAVKSALKTSLALDSAFGAGTPVHVAAAISSTLETIVFQTVGSNAPRGYPDELHQLLLYWISVLFVFTWVIVVLEVTIPVG 1515
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig995.20.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC76_ECTSI3.170e-13267.04Possible CAMK/ Leucine rich repeat protein n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 464..487
e-value: 84.0
score: 5.7
coord: 708..732
e-value: 120.0
score: 4.3
coord: 344..367
e-value: 360.0
score: 0.5
coord: 636..659
e-value: 190.0
score: 2.7
coord: 368..392
e-value: 14.0
score: 12.0
coord: 296..320
e-value: 29.0
score: 9.5
coord: 756..780
e-value: 45.0
score: 7.9
coord: 588..611
e-value: 36.0
score: 8.7
coord: 660..684
e-value: 34.0
score: 8.9
coord: 416..440
e-value: 21.0
score: 10.7
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 419..440
e-value: 0.38
score: 11.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 346..405
e-value: 9.2E-7
score: 28.5
coord: 710..769
e-value: 4.9E-8
score: 32.6
coord: 638..696
e-value: 8.2E-7
score: 28.7
coord: 565..625
e-value: 3.3E-7
score: 30.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 298..320
score: 7.119001
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 268..506
e-value: 1.3E-64
score: 220.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 509..844
e-value: 2.5E-81
score: 275.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 906..948
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1335..1349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1369..1383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1335..1397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1350..1368
NoneNo IPR availablePANTHERPTHR48055LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1coord: 519..824
coord: 382..663
coord: 274..417
coord: 274..511
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 274..506
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 482..825

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig995contigA-nodosum_M_contig995:85198..99645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig995.20.2mRNA_A-nodosum_M_contig995.20.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig995 84582..113206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig995.20.2 ID=prot_A-nodosum_M_contig995.20.2|Name=mRNA_A-nodosum_M_contig995.20.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1398bp
MREHEEAKGIKGPRSVDSYDDPPGLLPSQEARRRSVKAEKGTNQKNPSAC
PVVYSNADTSTVSSLSIVRNQSGGIFETSPRHGGEGKGHGCQTSVKPMMQ
SEEFDELGEVKDMSSLDLRKHSSSNLVAVRRSFAPRQSLELFEENETDNS
SRASDESCPREQEESKISELSAKKNAKPANKTPFSLNLSQEGISGISAAA
KATVKINTTSSKFLKLFSPSNSAHQSHGVLATIHRKMNGTGWPRRGGWDS
YLVRKSRAELDDGRVYGVKAKEGSVELLVLSSNNVCGRIPVEIARLSSLT
GLDLSNNHISGPIPAELGLLLQLQTLQLQGNNLRDEISPLLGSIINLVRL
SLGHNKLSGAIPDSLGSLVHLKFLSLEHNRLTGHIPSFICRLPVLESLNA
SSNQLSGVIPKGIGLLSMLKKLDLSDNLLEGTIPNSLCTLKLLNWLRLDS
NQLGGEVPVEFSGLKNLLILNLSSNNFSGPMPAALGLCPDIMTVHLRGNF
FHGPCPFPVAQASSKGSGIRKLDLGCNDLDEPLPDLTGLRDLQTLAMDNN
KFYGGVGKGLTNTCPNLSKLHLQSNRLTGELPDSLGTLTKLEDLNLSDNC
FEGYLPTGLQSLQLLRTFSASNNELSGELPSFLGNLTELTRLALNGNNFE
GTIPRELGKLTSLEGLYLEKNELVGSIPADLSKCVSLRELYLHENKMWGN
IPDSLSKLVELRYLYLYKNRLTGTVPEWLAELQHLQGLILGENRLMGTIP
WQLGHLHKLEDLYLNDNRLEGGIPERLIVNCERLQRLVVAGNQLTGRVPR
SLASVQDLRELNIERNNMHGELPIPLFLKTSLGPHACGLKFSGNPRIVDS
RAHFASTVAGIRRAEARSTSPAAVVSSPKDRLRRKKALLFVFRSVVRTLP
TSRKLRRERDSSFVGEGSQRTHPSEMPKGPSNVGGSEHVLPSEPGSLMSH
GETEGDVVGFSGESLLKRDVEEGREEDSTLTMDVDDRGGLARPWVSSEDV
FYFLLKAVVGNASVALDLVVAVRLLYTGCMWGFVGVVVWKAAAAMEGVAA
TRRLGYGNQWKFLAAVGLALPLESRRCFYHSCESDLFQALQRVEWRWHAM
IQFVMQLAAALACWNYAYSWLIIFWVSVVTKGIVVGVVSMQRLDDQRLLR
AWANTAHQQHVSLVKPTWSSNLKANFLPWVQTSAWSRLILVGFHIAELSE
RTIPLSVLIVSLGRWVFLAPLAMMPGMLVRYVARRGRRVPGAGGILSGVK
KALRTSLALDSSFGAGTPEHLVALIATTVETVAFNSFAAGNPRAYPSFLG
DAILSWCSMMLIYTWLVFLLEKLVPLGAGTPRLSPPPLLTPPSKPCSPPV
LPRGSSSSAPQASSSRLPVVDRSDDRDKCGATGMQRDRTGMVVPSEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf