prot_A-nodosum_M_contig993.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig993.4.1
Unique Nameprot_A-nodosum_M_contig993.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length366
Homology
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BLAST of mRNA_A-nodosum_M_contig993.4.1 vs. uniprot
Match: D7FJP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP0_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.030e-13
Identity = 76/293 (25.94%), Postives = 123/293 (41.98%), Query Frame = 0 
Query:  106 MIGDSTMRMQADGLFAILSGITTETGERRCPC--TTHKEPCLCSRS------GENRNGSAL-LQIDYYKVEETCVASEVVANFVYFGCGLHILQRHPS----RPMTEDSLQSWTQYERILENGVLAYRSSGSARGGYLGEAFMSTHSILIEKLEDPMLGEILAYARG--DDMALSQCYEK-------VEELKRSMKGFVF-------DIPPEDICKRGY-------FADECVV------ALNKRGKEMMRRLGVPIVPSYEITLNQPWATPKADGRHYVPLIPHELANFLGII 356
            M+GDSTM  Q    +  + G   E   RR       H  P  C  +      GE   G  L  + D ++  +   A+    +  YFG GLH+L  +P      PM    +QSW  YE +LE  V A R      G  +   FM+ H+I  E+ +        AY  G  +    ++C ++          +K +   F +       DI    +   G        + +E ++       L++R + +M RLGVP+V +  I   Q WA+  +DGRH+  ++P E+ + L ++
Sbjct:    1 MVGDSTMSHQ----YGAICGFMGEREGRRYDPEKAQHGSPGCCMDTLPKEDEGEGGGGRGLCFEFDQFRFLDPKRAARTSVDAYYFGSGLHLLHMYPHWPEMYPMEPLRVQSWLNYESLLEGVVQAVRYKS---GPNVRVVFMTNHAIADERFQGEYKDIRAAYREGPGNTTIRAECQDQNNTQVKQAASVKDAHGDFSYSDWHGAPDIAEYMVYPEGQGLFTVDTYCEEAILDRRGSLQLSRRARPVMSRLGVPLVDAARIVEGQGWASNPSDGRHFHKIVPIEVVDLLSVL 286
[Close]
BLAST of mRNA_A-nodosum_M_contig993.4.1 vs. uniprot
Match: D7FJP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP2_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 7.630e-6
Identity = 47/146 (32.19%), Postives = 62/146 (42.47%), Query Frame = 0 
Query:  100 ETFQVAMIGDSTMRMQADGLFAILSGITTETGERRCPCTTHKEPCLCSRSGENRNGSAL-LQIDYYKVEETCVASEVVANFVYFGCGLHILQRHPS----RPMTEDSLQSWTQYERILENGVLAYRSSGSARGGYLGEAFMSTHSI 240
            + F+V M+GDSTMR Q    +  L G   E G RR                E   G  L  ++D  +  +   A E   +  YFG GLH+L   P      PM    +QSW  YE +LE  V A R      G  +   FM+ H+I
Sbjct:   82 QPFRVLMVGDSTMRHQ----YGALCGFMGERGGRRY------------NPREEGGGRGLCFELDQLRFLDPKRAGETSVDAYYFGSGLHLLHMLPHWPEMNPMEPLRVQSWLNYESLLEGVVQAVRKKS---GQNVKLIFMTNHAI 208
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig993.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJP0_ECTSI1.030e-1325.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJP2_ECTSI7.630e-632.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig993contigA-nodosum_M_contig993:130291..202097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig993.4.1mRNA_A-nodosum_M_contig993.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig993 130197..202909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig993.4.1 ID=prot_A-nodosum_M_contig993.4.1|Name=mRNA_A-nodosum_M_contig993.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=366bp
MNKPRATIAYGRYVLVILLGVYVSILNHHTTNGLDYGSNEAMHEAFIEGQ
EPSSTLHSSDWYDTWAIDLLARVEDLFLALETRPVQSVSSPEFRMMSSSE
TFQVAMIGDSTMRMQADGLFAILSGITTETGERRCPCTTHKEPCLCSRSG
ENRNGSALLQIDYYKVEETCVASEVVANFVYFGCGLHILQRHPSRPMTED
SLQSWTQYERILENGVLAYRSSGSARGGYLGEAFMSTHSILIEKLEDPML
GEILAYARGDDMALSQCYEKVEELKRSMKGFVFDIPPEDICKRGYFADEC
VVALNKRGKEMMRRLGVPIVPSYEITLNQPWATPKADGRHYVPLIPHELA
NFLGIINMALREEKL*
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