prot_A-nodosum_M_contig992.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig992.9.1
Unique Nameprot_A-nodosum_M_contig992.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length946
Homology
BLAST of mRNA_A-nodosum_M_contig992.9.1 vs. uniprot
Match: A0A6H5JNI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI7_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 9.000e-109
Identity = 305/854 (35.71%), Postives = 399/854 (46.72%), Query Frame = 0
Query:  243 KAATVPRKRRLLRLESGRLVVLPTNVYKQGGGVKLDLALGGFRINGEKCTVKNRAFNFGVLQGFTEENLLALRAFRNILIPPERV---GSIHPIAAAEILHRYDEEHAKLPHGQT-SEPTTHPDGGGWIPDSGQVHVTFVGSAMEILVKAGDLRALDRPLQCKLALETLKNDPRTME-----EPPPLEVLSTGSREDGSRGIGTEAGATGFALSPLAGDCMSPSPTPAAPVEAIGADAFRINCPESALEPGLDVKGDGCTP------------ARRRKK------------------------KKAVKANDGVV-YELPTYVQNVDTKLGRSTLRLKMPLSGFLVNGESVSVADLVVAYGLEVTRKNLLALRACREAMLSNFAGPVLVKRAVAAELFHVWAKR-GE---GRESAS--------------------------VEPSESCDPGEPPQQRGHAD--------------------------------------------------------------------------TPPNSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATPGSPDAKSRSALADNIMVRFTGPVSPLGGKRIEVQMMVGELRRARQNRLAEYRQLLVTMLNDPEVQSGELGVLEPSIHPTPALTEQNSSGAAXXXXXXXXXXXXVSRRTNENNGEISGAPTPPHEQRSHGRTPA------------EWSDNGSAFVLSGRGKRPRYERMRVGGGGAAEASPSAEGVAEDRXXXXXXXXXXXXXXXXXXXXXAAFSASKRRRQLWMLAIRDNELRYERRKEIARKEYELRQQQLLRWMVDEEAGRHED-SGEAGPPP 933
            K    P+++RL+RLESG LVV+PTN+Y+Q GGVKLD+ LGGFRI+ EKCT+KNRA+NFGVL GFT ENLLALRAFR+ L+P +R     SIH I AAE + RYDEEH K P G + +E ++H   G WIPDS  +H+T+ GS ME+ VKAGDLRA++RPLQCK+ALE LK+DP+ +E      PP ++V  +G  E     +G E GATGF+ SP +    S  P       A G +      P         +   G                R R K                        ++  +  +G V Y+LP +VQ V+ K  R +LRLK+PL+GF+V+GE V  ++LVVA+GL++TRKNLLALRAC +A+L+NFA P LVKR +A E+F VW +R GE    R SA                           V P    D G P    G                                                                             +PP                                      A P        +AL ++ +   + P S  GG RIE++M   ELRRARQ + A  + LL TML D +VQ+GEL V+      +PA+T  N SGAAXXXXXXXXXX       +     +SG        RS+  +              + ++   A +L  R KR +       G     A+P    V                             AS +RRQLW LAIR+NELR+ER KE  R EY++RQ++L+ WMVDEEAGRH+   G AGPPP
Sbjct:   96 KPVAAPKRKRLMRLESGELVVIPTNIYRQAGGVKLDITLGGFRIDNEKCTLKNRAYNFGVLPGFTRENLLALRAFRDTLLPTDRSKMPSSIHTIIAAEAMIRYDEEHVKPPEGSSFAEESSHYGAGRWIPDSRVIHMTYTGSDMELRVKAGDLRAVNRPLQCKMALEALKSDPKVLEGKLEPAPPSVDVYGSGGAET----VGPEPGATGFSRSPESLQPASSDPRSGGRRVAGGGEGXXSRAPAGGANAEFSLLFGGAAAFANDGFVDDHDNGRPRTKDLDSTSMHRXXXXXXXXXXXXXXTEEGGEGGEGAVEYDLPLHVQIVEGKQCRPSLRLKVPLTGFMVDGEIVPSSELVVAHGLDITRKNLLALRACCDAVLANFAAPDLVKRVIAGEVFRVWTRRRGEDMRARRSADAILGTAQSPGVSELDESPPAPAMPTDVVPLTVVDSGSPVLLEGGGSQTQTEAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPSGEGAVAAXXXEMXXXXXXXXXXXXXTGGTMLSSPPAEVDLDTASEGGDGGAPAISHLVVTPAITRGTAPTVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKTLLATMLQDAKVQAGELDVVHGMS--SPAITRSNLSGAAXXXXXXXXXXVVTRANLHTTALLVSGKEEREKASRSNSNSAVRNVGYSGRDIGTKVAERWGATLLLHRVKRAKAVDYSPLGPCEVAAAPGDISVMP------------------------ITKASSQRRQLWALAIRENELRHERMKEDGRSEYDVRQKELVSWMVDEEAGRHDHLDGTAGPPP 919          
BLAST of mRNA_A-nodosum_M_contig992.9.1 vs. uniprot
Match: D8LTH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH9_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.340e-23
Identity = 107/268 (39.93%), Postives = 142/268 (52.99%), Query Frame = 0
Query:  680 SALADNIMVRFTGPVSPLGGKRIEVQMMVGELRRARQNRLAEYRQLLVTMLNDPEVQSGELGVLEPSIHPTPALTEQNSSGAAXXXXXXXXXXXXVSRRTNENNGEISGAPTPPHEQRSHGRTP------------AEWSDNGSAFVLSGRGKRPRYERMRVGGGGAAEASPSAE-GVAEDRXXXXXXXXXXXXXXXXXXXXXAAFSASKRRRQLWMLAIRDNELRYERRKEIARKEYELRQQQLLRWMVDEEAGRHED-SGEAGPPP 933
            +AL ++ +   + P S  GG RIE++M   ELRRARQ + A  ++LL TML D +VQ+GEL V+     P  A+T  N SGAAXXXXXXXXXXX      +     +SG        +S   +             ++ ++   A +L  R KR R          AA++SP    GVA                           +AS +RRQLW LAIR+NELR+ER KE +R EY++RQ++LL WMVDEEAGRH+   G AGPPP
Sbjct:   56 AALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHGMSGP--AITRSNLSGAAXXXXXXXXXXXVTRANLHTTALLVSGKEEREKASKSTSNSAVRNVGYSGRDIGSKVAERWGATLLLHRVKRAR----------AADSSPLGPCGVAA---------------APGDISVVPITTASSQRRQLWALAIRENELRHERMKEDSRSEYDVRQKELLSWMVDEEAGRHDHLDGTAGPPP 296          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig992.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNI7_9PHAE9.000e-10935.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH9_ECTSI1.340e-2339.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..871
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 917..945
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 772..789
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..668
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..680
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 846..866

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig992contigA-nodosum_M_contig992:207841..211707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig992.9.1mRNA_A-nodosum_M_contig992.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig992 207754..212899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig992.9.1 ID=prot_A-nodosum_M_contig992.9.1|Name=mRNA_A-nodosum_M_contig992.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=946bp
MDGRGRRRATEASVPPIDSDHGVTKRSSRCNTVGSTIATLAAAAAAAPEA
KASSPSFSARGVPRLSESFTPRERSRTNPCAVDTAASGIDKAGSSRQGVG
RHQDSRPRLSPSPTAPAPSHGLQRPTMSGSRVTRSSEGSLNVRRSRAGEG
INATAVTISAGPVITTSAPPVSATAGAAATAAAVTPPTSSHNPVPTTNTI
TDVSRQCHGDLEAAPVNEDDGLPLASQGMPALGPNERERLIVKAATVPRK
RRLLRLESGRLVVLPTNVYKQGGGVKLDLALGGFRINGEKCTVKNRAFNF
GVLQGFTEENLLALRAFRNILIPPERVGSIHPIAAAEILHRYDEEHAKLP
HGQTSEPTTHPDGGGWIPDSGQVHVTFVGSAMEILVKAGDLRALDRPLQC
KLALETLKNDPRTMEEPPPLEVLSTGSREDGSRGIGTEAGATGFALSPLA
GDCMSPSPTPAAPVEAIGADAFRINCPESALEPGLDVKGDGCTPARRRKK
KKAVKANDGVVYELPTYVQNVDTKLGRSTLRLKMPLSGFLVNGESVSVAD
LVVAYGLEVTRKNLLALRACREAMLSNFAGPVLVKRAVAAELFHVWAKRG
EGRESASVEPSESCDPGEPPQQRGHADTPPNSPENPDKGSTGDSVGGRGA
TSATETNDPPNGSGGSGVATPGSPDAKSRSALADNIMVRFTGPVSPLGGK
RIEVQMMVGELRRARQNRLAEYRQLLVTMLNDPEVQSGELGVLEPSIHPT
PALTEQNSSGAAAAAAATAATAATVSRRTNENNGEISGAPTPPHEQRSHG
RTPAEWSDNGSAFVLSGRGKRPRYERMRVGGGGAAEASPSAEGVAEDRGE
AADRGEAADRGEAADRGEAAAFSASKRRRQLWMLAIRDNELRYERRKEIA
RKEYELRQQQLLRWMVDEEAGRHEDSGEAGPPPMEMGKGTGPCTP*
back to top