prot_A-nodosum_M_contig992.8.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig992.8.3
Unique Nameprot_A-nodosum_M_contig992.8.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length220
Homology
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI)

HSP 1 Score: 388 bits (996), Expect = 2.380e-133
Identity = 187/217 (86.18%), Postives = 206/217 (94.93%), Query Frame = 0
Query:    2 MKPRVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTILDLADERARQKKGGGCC 218
            MKPRVLLKIVVLG SNVGKTSLMKRY A DFT+ RRPTIGADFMTKE++ GDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALL+YD++CAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNK+DLA G+ MDG++GVD+ RV+KWCEMQGMGHIETSAKDGTGV+VAMQAVA+LAL+QK KRERDLAL+PSLGGGT LDLAD+RARQ++ GGCC
Sbjct:  148 MKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLGGGTTLDLADQRARQQRTGGCC 364          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA)

HSP 1 Score: 232 bits (591), Expect = 3.870e-73
Identity = 117/217 (53.92%), Postives = 155/217 (71.43%), Query Frame = 0
Query:    2 MKPRVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGT-ILDLADERARQKKGGGC 217
            M+ RV+LKI+VLGSSNVGKTSLM+R+  + F+E RR T GADF +K +    Q ++LQIWDTAGQERFH G+LG  F+RGA+AALL+YD + A SF+QV  WR E+L R+DV P DFP+VV+GNK+D+    PMDG++GVD+  V +WC   G GHIETSAKDGTGV VAM+A+  LAL ++    + +A   SL G    ++L+    + +   GC
Sbjct:    1 MEERVVLKIIVLGSSNVGKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRKAGVQRIARMNSLTGAKDSVNLSTSFRKGETSSGC 217          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN)

HSP 1 Score: 192 bits (489), Expect = 1.480e-58
Identity = 108/214 (50.47%), Postives = 143/214 (66.82%), Query Frame = 0
Query:    7 LLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTILDLADERARQ-KKGGGCCR 219
            LLK VVLGSSNVGKTSL+ ++V   FT  RR T GADF +K +  GD+ + L IWDTAGQERFH G+LG  F+RGA+AALL+YD +   +FEQ+ MWR ELL R+D  P +FP+VV+GNK+D+      +     ++  V++WC   G+G   TSAKDGTGV VAM+AVAMLAL+ K +R+   A  P     T++ L +  AR   +   CC+
Sbjct:   10 LLKCVVLGSSNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVP-----NKTREHEQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQ---AAEPEQKRQTVV-LDELHARPVARDASCCK 214          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 7.140e-54
Identity = 103/212 (48.58%), Postives = 132/212 (62.26%), Query Frame = 0
Query:    7 LLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTILDLADERARQKKGGGCC 218
            +LK VVLGSSNVGK+SL++RY  + F   RR T+GADF +K I  G++ + L IWDTAGQERFH G++G  F+RGA+ ALL+YD +   +F QV +WR ELL R+D  P  FPIV +GNK+DL      D     D      WC   G+G +  SA DGTGV VAM+AVA LAL+ K +R+      P       L L D  AR+K+G   C
Sbjct:   59 MLKCVVLGSSNVGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKP-----PSLSLDDLHAREKRGSSNC 259          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: D2VAL1_NAEGR (Rab family small GTPase n=2 Tax=Naegleria TaxID=5761 RepID=D2VAL1_NAEGR)

HSP 1 Score: 171 bits (432), Expect = 4.500e-50
Identity = 96/218 (44.04%), Postives = 138/218 (63.30%), Query Frame = 0
Query:    3 KPRVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTILDLADERARQKKGGGCC 218
            + +VLLK+++LG S VGKTSLM +YV   F+ + + TIGADF+TKE++  D+ + +QIWDTAGQERF   SLG  F+RGA++ +L++D + A +FE +  WR+E L++    DP +FP VVI NK+DL + +       V + R L WC+ +G + + E SAK+GT V+ A Q +A  AL     +E D    P  GG +I +  DE   Q K  GCC
Sbjct:    4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQ--SLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPFVVIANKIDLDQRI-------VPQKRALAWCKAKGNIPYFECSAKEGTNVEQAFQTIARNALG----KEEDT---PYTGGQSITEFPDEP--QPKKSGCC 203          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA)

HSP 1 Score: 171 bits (433), Expect = 5.310e-50
Identity = 102/219 (46.58%), Postives = 134/219 (61.19%), Query Frame = 0
Query:    7 LLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEI-IAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTILDLADERARQKKGG-----GCCR 219
            LLK VVLGSSNVGKTSL+ +++   F   RR T GADF ++ + I   + + L IWDTAGQERFH G+LG+ F+RGA+ ALL+YD +   SFEQ+ MWR ELL R+   P +FP+VV+GNK+D+            +   V KWC   G+G   TSAKDGTGV  AM+A+A LA + K +R +  + H SL     L L D   R  +G       CC+
Sbjct:   11 LLKCVVLGSSNVGKTSLLTQFIHGRFDSTRRATTGADFASRVLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDIPSET-----RDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQRRGK--SSHSSLNDRDTLAL-DNIRRNNRGAVDSSSSCCK 221          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: A0A7S3H9L0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9L0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.020e-49
Identity = 98/220 (44.55%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    3 KPRVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQG---MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTILDLADERARQKKGGGCC 218
            + +VLLKI++LG S VGKTSLM +YV   F+ + + TIGADF+TKE++  D+ + LQIWDTAGQERF   SLG  F+RGA+A +L++DI+   SFEQ+  WREE L + +  DP +F  VVIGNK+D       +    V +++V +WC+ QG   + + ETSAKD T V+VA    A  AL Q    + D+ +  +      ++L+ + A  K  GGCC
Sbjct:    4 RKKVLLKIIILGDSGVGKTSLMNQYVNQRFSSQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQ--SLGVAFYRGADACILVHDITAEKSFEQLNSWREEFLAQANPRDPDNFSFVVIGNKVD------KESERRVPKSKVTQWCKSQGPKPIPYFETSAKDATKVEVAFLEAAQAALHQD-SADSDVFIPDT------INLSKQTAPAKSSGGCC 208          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: A0A0C2XM57_AMAMK (Uncharacterized protein n=4 Tax=Agaricales TaxID=5338 RepID=A0A0C2XM57_AMAMK)

HSP 1 Score: 169 bits (428), Expect = 1.860e-49
Identity = 86/185 (46.49%), Postives = 125/185 (67.57%), Query Frame = 0
Query:    5 RVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRE 187
            RVLLK+++LG S VGKTSLM +YV   F+ + + TIGADF+TKE+I  D+P+ +Q+WDTAGQERF   SLG  F+RGA+  +L+YD++ + SFE +  WR+E L++    DP +FP VV+GNK+D+      +    V + R + WC+ +G + + ETSAKD   V+ A Q VA  AL Q+ + +
Sbjct:    3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRPVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVE-----ENKRQVTQKRAMTWCQSKGNIPYFETSAKDAINVEQAFQTVAKNALQQEAEEQ 180          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH)

HSP 1 Score: 167 bits (424), Expect = 6.630e-49
Identity = 88/180 (48.89%), Postives = 121/180 (67.22%), Query Frame = 0
Query:   22 SLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGTI 201
            S   R+    F+  RRPT+G+DF TK+++  D  + LQIWDTAGQERF+ GS+GS FFRGA+ ALL+YD++   S EQ+A WREE L R   D + FP+VVIGNK+D+ + +P++    VD + VL WC     GHIETSAKDG GV+ AM A+  LAL+    R+R   ++ ++GG  +
Sbjct:    9 SSFDRFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSRQLEDEY-FPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMRNRQRR-NVNAAMGGEKV 184          
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Match: K5XK14_AGABU (Uncharacterized protein n=5 Tax=Agaricales TaxID=5338 RepID=K5XK14_AGABU)

HSP 1 Score: 167 bits (423), Expect = 9.980e-49
Identity = 86/185 (46.49%), Postives = 125/185 (67.57%), Query Frame = 0
Query:    5 RVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEIIAGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWCEMQG-MGHIETSAKDGTGVDVAMQAVAMLALDQKCKRE 187
            RVLLK+++LG S VGKTSLM +YV   F+ + + TIGADF+TKE+I  D+ + +Q+WDTAGQERF   SLG  F+RGA+  +L+YD++ A SFE +  WR+E L++    DP +FP VV+GNK+D+      +G   V + R + WC+ +G + + ETSAK+   V+ A Q VA  AL Q+ + +
Sbjct:    3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVE-----EGKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQ 180          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig992.8.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ2_ECTSI2.380e-13386.18Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RVV0_9STRA3.870e-7353.92Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y7J9_AURAN1.480e-5850.47Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2S8J0_9STRA7.140e-5448.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D2VAL1_NAEGR4.500e-5044.04Rab family small GTPase n=2 Tax=Naegleria TaxID=57... [more]
A0A7S3K3U1_9STRA5.310e-5046.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3H9L0_9STRA1.020e-4944.55Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A0C2XM57_AMAMK1.860e-4946.49Uncharacterized protein n=4 Tax=Agaricales TaxID=5... [more]
A0A482SWX8_9ARCH6.630e-4948.89GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
K5XK14_AGABU9.980e-4946.49Uncharacterized protein n=5 Tax=Agaricales TaxID=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 116..129
score: 44.64
coord: 31..47
score: 32.62
coord: 157..179
score: 31.62
coord: 8..29
score: 41.34
coord: 49..71
score: 45.22
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 8..182
e-value: 1.1E-54
score: 197.6
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 13..211
e-value: 3.0E-4
score: 11.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 5..182
e-value: 7.4E-12
score: 50.0
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 9..175
e-value: 0.028
score: 11.1
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 9..175
e-value: 0.028
score: 11.1
NoneNo IPR availablePANTHERPTHR47981RAB FAMILYcoord: 1..218
NoneNo IPR availablePROSITEPS51419RABcoord: 3..218
score: 25.595554
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 10..182
e-value: 1.1E-9
score: 4.9
IPR001806Small GTPasePFAMPF00071Rascoord: 9..176
e-value: 3.4E-43
score: 147.0
IPR001806Small GTPasePROSITEPS51421RAScoord: 2..202
score: 13.885427
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..190
e-value: 3.1E-50
score: 172.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..190
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 9..174
e-value: 1.1E-21
score: 75.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig992contigA-nodosum_M_contig992:184963..207029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig992.8.3mRNA_A-nodosum_M_contig992.8.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig992 184243..207506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig992.8.3 ID=prot_A-nodosum_M_contig992.8.3|Name=mRNA_A-nodosum_M_contig992.8.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=220bp
MMKPRVLLKIVVLGSSNVGKTSLMKRYVASDFTERRRPTIGADFMTKEII
AGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLMYDISCAVSFEQV
AMWREELLVRLDVDPHDFPIVVIGNKLDLAKGVPMDGVNGVDRNRVLKWC
EMQGMGHIETSAKDGTGVDVAMQAVAMLALDQKCKRERDLALHPSLGGGT
ILDLADERARQKKGGGCCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom