prot_A-nodosum_M_contig992.15.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig992.15.2
Unique Nameprot_A-nodosum_M_contig992.15.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length375
Homology
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A6H5JRQ4_9PHAE (TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRQ4_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 8.920e-97
Identity = 208/359 (57.94%), Postives = 242/359 (67.41%), Query Frame = 0
Query:    1 MKRLLRAVSSTLRGITPKARPPSASAPKSVHQEKVRKAMEALAPKGAMLPSENRALAMEVTAAVKGGDD----LLKKTPEEMFIVANGLFQGTYLPEDKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMGVPQDEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLEVDHEKAYELHLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKAAXXXXXXXXXXXXXXXXXXXXXXXDQQRALQMYKDGLRAEGQLGGPVAKFGDTMMEKIVLESRQG 355
            MKR+  AVS   R + PKA     +AP + HQE VRKAME+LAP G  LPSE++ L ME+ AA   GD      L KTPE+MF+ AN   QG ++  DK  AF LWK AA+AGH KA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E +G+PQDE RA  LFK+AA GGFVPAIHAAASMMEAGKGG+KE+AKA QWLEVA+EAGDP+A STLATWY  GR GLEVDH+KA+ELHL AA   MPRAQYNTAV   EG G++QNLPEAA WFE+A                        D++RAL++Y+  LRAEGQL G +A  GD  M  +    ++G
Sbjct:    1 MKRVFGAVSGAFRSLVPKA-----TAPAAHHQESVRKAMESLAPPGRRLPSESKPLVMELVAAASEGDKEKELSLLKTPEDMFLAANAFHQGKHIRADKETAFALWKKAAEAGHPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDVGIPQDEERALGLFKAAATGGFVPAIHAAASMMEAGKGGEKEDAKAVQWLEVAMEAGDPMAYSTLATWYTAGRAGLEVDHKKAFELHLKAANMNMPRAQYNTAVHYLEGTGIEQNLPEAAAWFERAGALGMPQAMLNLGKMLENGIGVEVDRERALKLYQAALRAEGQLKGGLATAGDATMAALFEAKQEG 354          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A482SVR9_9ARCH (Sel1 repeat family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVR9_9ARCH)

HSP 1 Score: 104 bits (260), Expect = 1.440e-21
Identity = 66/197 (33.50%), Postives = 91/197 (46.19%), Query Frame = 0
Query:   94 DKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMGVPQDEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLEVDHEKAYELHLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKA 290
            D  KA ELW   A  G ++A YS A CL++G G                                       G   D  +A   ++ AA GG  PA H  A+    G+G ++ +  A  + E  +E GDP +   L TW+ +GRGGLEV+ +KA++L L AA    P A +N    L  G GV ++ P+AA WFEKA
Sbjct:  108 DPAKAVELWTLCASKGSVEARYSRAICLKDGVGIAEDKATAIQELQGLVDKHNYNFAHYSLAIMYDRGE---GCLVDLPKAFYHYRLAAKGGIQPAFHNLANAYAFGRGVEQSDHNARMFYEAGVEMGDPASLYVLGTWHYNGRGGLEVNKQKAFDLQLQAANAKHPAAMFNIGAALLVGDGVSEDAPKAAEWFEKA 301          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A1Y1RC54_9PROT (Beta-lactamase n=1 Tax=Campylobacteraceae bacterium 4484_4 TaxID=1970775 RepID=A0A1Y1RC54_9PROT)

HSP 1 Score: 90.9 bits (224), Expect = 1.570e-17
Identity = 52/120 (43.33%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  170 DEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLEVDHEKAYELHLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEK 289
            D   A  ++   A  G   A  + A M + G+G +K+EA+A +  E A+E   P A   LA WY +G+GGLE +  KAYEL L AA  G+PRAQY  AV    G G  QN  EAA W+E+
Sbjct:   17 DYEEAFSVYSELAKEGDPDAQTSLAYMYQQGQGCEKDEARARELYEKAVEKKQPYALFNLAVWYANGKGGLERNPFKAYELFLEAAVAGIPRAQYEVAVMSERGNGTPQNYSEAAYWYEE 136          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A7S2MPN1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MPN1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.400e-9
Identity = 58/189 (30.69%), Postives = 75/189 (39.68%), Query Frame = 0
Query:   81 VANGLFQGTYLPEDKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTK----------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERMGVPQDE-----------------HRARELFKSAAVGGFVPAIHAAASMMEAGKGG-DKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLE 241
            VAN L +G  + +D+ +A  LW+AAA  G + A YS+A    +G G +                                             R G  QDE                   A  L+KSAA GG VPAIH   +M   G  G  ++E KA +W E   E+GDP +  TLATW   G GG E
Sbjct:   74 VANALSKGIEIEKDEVRAALLWEAAARKGDIHAAYSFAMARYSGAGVEAEPEAAAASLETLAESGHSGAQYATAGILLKRYGGWEAQAGVGGRREGENQDEGGKVVAEEAAAAVEAAHQHALSLYKSAAKGGVVPAIHNVGNMYATGLPGIPQDEGKAKKWYEAGAESGDPFSMFTLATWACAGTGGEE 262          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: UPI001C625E30 (SEL1-like repeat protein n=1 Tax=Massilia sp. PAMC28688 TaxID=2861283 RepID=UPI001C625E30)

HSP 1 Score: 60.5 bits (145), Expect = 1.140e-7
Identity = 34/81 (41.98%), Postives = 49/81 (60.49%), Query Frame = 0
Query:  170 DEHRARELFKSAAVGGFVPAIHAAASMMEAGKGGDKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLEVDHEKAYEL 250
            D  RA  L ++AA  G  PA+   +SM+ AG+G  ++EA+A QWLE A++  +P A   LA + QDG GG   D + A +L
Sbjct:   35 DSARALVLIEAAAKAGHAPAMFILSSMLMAGEGTARDEARARQWLERAVDEDNPEAMQQLAYYLQDGLGGYARDEQHAAQL 115          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A4D9CUF7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUF7_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.240e-7
Identity = 59/237 (24.89%), Postives = 93/237 (39.24%), Query Frame = 0
Query:   46 GAMLPSENRALAMEVTAAVKGGDDLLKK-----TPEEMFIVANGLFQGTYLPE-----DKPKAFELWKAAADAGHLKATYSYAGCLRNGEGTKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER--------------------MGVPQDEHRARELFKSAAVGGFVPAIHAAASMM-EAGKGGDKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLEVDHEKAYELH 251
            GA +P+     A  V A  K  ++L+ +     + E +  +A+  + G  +P+     D+ KA ELW+AA + G  +  Y YA CL  GEG  +                                 +                     MG  +       L + A  GG VPA+H   +++ E  +   +++  A +      E GDP +  TLATW   GRGG E D ++ +ELH
Sbjct:   13 GAQMPAPPLDAATVVKAVKKSAEELVAREQPPLSNEALLFLADIFWSGLRMPDVSIPRDQAKAAELWRAAGERGDGEGAYRYAMCLLQGEGAPQHRDRATTLLNELAETGHVQASYSLAVLLSAQLEDGQPLQRRGGARSRTPPQKKVGMGGKKSAVVVYGLLRRAIAGGVVPAVHNMGNLLAEGAQELPRDDEAALEMFTAGAELGDPKSVYTLATWLCQGRGG-EEDWDRGFELH 248          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: UPI001F0FD052 (sel1 repeat family protein n=1 Tax=Pseudomonas sp. B707 TaxID=2689570 RepID=UPI001F0FD052)

HSP 1 Score: 59.3 bits (142), Expect = 3.490e-6
Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  213 WLEVAIEAGDPLAASTLATWYQDGRGGLEV--DHEKAYELHLNA-AKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKAA 291
            WLE+A EAGDPLA +TLA  Y+DG G        EKA E    A AK G PRA Y  A  L+E  G ++   +AA W +K+A
Sbjct:  152 WLEMAAEAGDPLAQNTLAGVYKDGDGWFLTPGSREKAIEKWYGASAKGGYPRAMYLYANYLYEHGGKKE---DAAYWLKKSA 230          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A8K0JWT0_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JWT0_9TREE)

HSP 1 Score: 60.1 bits (144), Expect = 3.780e-6
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0
Query:  219 EAGDPLAASTLATWYQDGRGGLEVDHEKAYELHLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKAA 291
            E G P A   LA  +  G+ GL+VDHEKAY+L++ A+K   P A Y TAV    G G ++ +  A +++ KAA
Sbjct:  374 EGGYPEAQFFLANMFGTGQLGLQVDHEKAYQLYMQASKANHPAATYRTAVCNELGAGTRKEMNRAVLFYRKAA 446          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A0C2SYQ8_AMAMK (Uncharacterized protein n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2SYQ8_AMAMK)

HSP 1 Score: 57.0 bits (136), Expect = 3.060e-5
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
Query:  229 LATWYQDGRGGLEVDHEKAYELHLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKAA 291
            LA  Y  G  GL+VDHE+AY L+L AAK+  P A Y  AV    G G ++  P AA ++ KAA
Sbjct:  199 LANCYGTGALGLQVDHERAYHLYLQAAKQNHPAATYRVAVCNEIGAGTRREPPRAAAFYRKAA 261          
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Match: A0A4S8MZA2_DENBC (HCP-like protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MZA2_DENBC)

HSP 1 Score: 57.0 bits (136), Expect = 3.330e-5
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
Query:  229 LATWYQDGRGGLEVDHEKAYELHLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKAA 291
            LA  Y  G  GL+VDHE+AY L+L AAK+  P A Y  AV    G G ++  P AA ++ KAA
Sbjct:  274 LANCYGTGALGLQVDHERAYHLYLQAAKQNHPAAAYRVAVCNEIGAGTRREPPRAAAFYRKAA 336          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig992.15.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JRQ4_9PHAE8.920e-9757.94TPR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A482SVR9_9ARCH1.440e-2133.50Sel1 repeat family protein n=1 Tax=archaeon TaxID=... [more]
A0A1Y1RC54_9PROT1.570e-1743.33Beta-lactamase n=1 Tax=Campylobacteraceae bacteriu... [more]
A0A7S2MPN1_9STRA5.400e-930.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001C625E301.140e-741.98SEL1-like repeat protein n=1 Tax=Massilia sp. PAMC... [more]
A0A4D9CUF7_9STRA1.240e-724.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
UPI001F0FD0523.490e-647.56sel1 repeat family protein n=1 Tax=Pseudomonas sp.... [more]
A0A8K0JWT0_9TREE3.780e-642.47Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A0C2SYQ8_AMAMK3.060e-547.62Uncharacterized protein n=1 Tax=Amanita muscaria (... [more]
A0A4S8MZA2_DENBC3.330e-547.62HCP-like protein n=1 Tax=Dendrothele bispora (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 187..222
e-value: 0.8
score: 18.7
coord: 296..331
e-value: 7.7E-4
score: 28.8
coord: 75..110
e-value: 8.2
score: 14.4
coord: 147..186
e-value: 0.32
score: 20.0
coord: 111..146
e-value: 0.022
score: 23.9
coord: 223..259
e-value: 0.0016
score: 27.7
coord: 260..295
e-value: 2.1E-6
score: 37.3
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 229..258
e-value: 0.018
score: 15.7
coord: 192..222
e-value: 1.4
score: 9.7
coord: 148..182
e-value: 0.0089
score: 16.7
coord: 296..324
e-value: 2.7E-4
score: 21.5
coord: 85..110
e-value: 0.023
score: 15.4
coord: 260..294
e-value: 2.0E-5
score: 25.1
coord: 113..145
e-value: 0.049
score: 14.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 68..341
e-value: 4.2E-62
score: 212.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..374
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 74..215
coord: 148..249
coord: 205..324
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 74..215
coord: 148..249
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 205..324
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 204..326
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 76..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig992contigA-nodosum_M_contig992:225228..235161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig992.15.2mRNA_A-nodosum_M_contig992.15.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig992 224681..235165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig992.15.2 ID=prot_A-nodosum_M_contig992.15.2|Name=mRNA_A-nodosum_M_contig992.15.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=375bp
MKRLLRAVSSTLRGITPKARPPSASAPKSVHQEKVRKAMEALAPKGAMLP
SENRALAMEVTAAVKGGDDLLKKTPEEMFIVANGLFQGTYLPEDKPKAFE
LWKAAADAGHLKATYSYAGCLRNGEGTKRDLPKAVELFERLGEKGLLEAK
HALGLILSSGEGERMGVPQDEHRARELFKSAAVGGFVPAIHAAASMMEAG
KGGDKEEAKAAQWLEVAIEAGDPLAASTLATWYQDGRGGLEVDHEKAYEL
HLNAAKRGMPRAQYNTAVQLFEGKGVQQNLPEAAMWFEKAAAAGVPQAML
NLGKMLEQGLGIERDQQRALQMYKDGLRAEGQLGGPVAKFGDTMMEKIVL
ESRQGRTRSQEDGGNGAANKTEQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf