prot_A-nodosum_M_contig991.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig991.11.1
Unique Nameprot_A-nodosum_M_contig991.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length235
Homology
BLAST of mRNA_A-nodosum_M_contig991.11.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.250e-68
Identity = 125/244 (51.23%), Postives = 166/244 (68.03%), Query Frame = 0
Query:    1 MSKPRPTST--DAEYYTRGSYQQGGDGERSGAGQ---MDDRAYAERLQQEEFRNAQQFSQALPTVTVTGHPVATTDGTQYVAMYPPSNAFDPADLGVSGNFMAPHEVRLMQAFAMGRTVRILAILDGILLLLQCAWYPILFLLLAWAPLAGWMAGTRFSTAWTYAYAAYCVLRLSNDLAYIIIGYYWSIFTFLVDLIIARYVFRFARTLNSLTPAEAEQLRNPTAVWSSNFRRR-----PFQML 234
            MS P+ +    D  YY   SYQQG +            +D   A+RLQQEE+RNA   ++ +P     G P     GTQYVA++PPS  FDPADLGV+G FMAPHE +LM+A ++ +T+R LA+ DG++L++ C ++P+L LLL W PL+GWMAGTR+STAWTYAY  Y +LRLS  L+Y+  GY+W IF F + L IAR ++RFA+ L++L+PAE EQLRNPTAVWS  +RR+     PFQ L
Sbjct:    1 MSDPKGSDPPIDEPYYAS-SYQQGSNAAAVAPAPGPTTNDEDLAQRLQQEEYRNALPAARGMPVQP--GAP-----GTQYVAIFPPSVPFDPADLGVAG-FMAPHEAKLMEASSLAKTIRWLAVFDGLILVINCGYFPMLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGYFWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTAVWSGQYRRQHQNQQPFQSL 235          
BLAST of mRNA_A-nodosum_M_contig991.11.1 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 5.830e-22
Identity = 52/138 (37.68%), Postives = 87/138 (63.04%), Query Frame = 0
Query:   94 GNFMAPHEVRLMQAFAMGRTVRILAILDGILLLLQCAWYPILFLLLAWAPLAGWMAGTRFSTAWTYAYAAYCVLRLSNDLAYIIIGYYWSIFTFLVDLIIARYVFRFARTLNSLTPAEAEQLRNPTAVWSSNFRRRPF 231
            G  +  HE RL++ +++GR VR++A++DG++LL  C  +P+ F+L+ W PLAG++  + F  ++   Y  Y VL+++ D+ +I+ G +W +   ++DL IAR+V+  A  L    PAE E LR P+ +WS   R R F
Sbjct:   92 GMALGDHERRLLETYSLGRGVRVIALIDGMILLFDCLLFPVFFVLM-WGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYGAWWFLAVLVIDLWIARWVYMLAALLWVANPAELEALRAPSHMWS---RARQF 225          
BLAST of mRNA_A-nodosum_M_contig991.11.1 vs. uniprot
Match: A0A836CJB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.080e-9
Identity = 36/128 (28.12%), Postives = 68/128 (53.12%), Query Frame = 0
Query:  103 RLMQAFAMGRTVRILAILDGILLLLQCA--WYPILFLL---LAWAPLAGWMAGTRFSTAWTYAYAAYCVLRLSNDLAYIIIGYYWSIFTFLVDLIIARYVFRFARTLNSLTPAEAEQLRN-PTAVWSS 224
            RLM+ +++ R++++L+++D ILL       W P+ F++   LAW P  G+ +   +       Y  Y V+++  D+  + +  +WSI    +D  I R V+ + + L   +P+E E L++ P   W S
Sbjct:   46 RLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWES 173          
BLAST of mRNA_A-nodosum_M_contig991.11.1 vs. uniprot
Match: D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.510e-5
Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 0
Query:  104 LMQAFAMGRTVRILAILDGILLLLQCAWYPILFLLLAWAPLAGWMAGT-RFSTAWTYAYAAYCVLRLSNDLAYIIIG-YYWSI-FTFL-VDLIIARYVFRFARTLNSLTPAEAEQLRNPTAVWSSNF 226
            LM      R VR+LAILD I++L   + +  L L++ W P+AG++A   R   A+T+ +  Y  LR+S D+ +I+ G   W + + FL  D+  +  V+ F   L   + AE E LR+P   W+S F
Sbjct:   91 LMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMI-WGPIAGYLASNFRLRAAFTFLF--YYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAF 214          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig991.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KAV0_9PHAE1.250e-6851.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1TFA5_HETAK5.830e-2237.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CJB9_9STRA1.080e-928.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LQC7_ECTSI1.510e-535.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig991contigA-nodosum_M_contig991:108434..132009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig991.11.1mRNA_A-nodosum_M_contig991.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig991 104695..132291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig991.11.1 ID=prot_A-nodosum_M_contig991.11.1|Name=mRNA_A-nodosum_M_contig991.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=235bp
MSKPRPTSTDAEYYTRGSYQQGGDGERSGAGQMDDRAYAERLQQEEFRNA
QQFSQALPTVTVTGHPVATTDGTQYVAMYPPSNAFDPADLGVSGNFMAPH
EVRLMQAFAMGRTVRILAILDGILLLLQCAWYPILFLLLAWAPLAGWMAG
TRFSTAWTYAYAAYCVLRLSNDLAYIIIGYYWSIFTFLVDLIIARYVFRF
ARTLNSLTPAEAEQLRNPTAVWSSNFRRRPFQML*
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