prot_A-nodosum_M_contig99.64.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.64.1
Unique Nameprot_A-nodosum_M_contig99.64.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length585
Homology
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: A0A6H5JFY4_9PHAE (zf-C2HC5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY4_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 3.520e-103
Identity = 305/610 (50.00%), Postives = 339/610 (55.57%), Query Frame = 0
Query:    1 MGDTRAWLEGELRRMLGFDEVEEIARFALDSYSVSQAAELKQYLEQFLGQSEEVRKL--CDELSSRRSVATSLSAPKTGSTRGP---HASAGEDFWGAGGSSGAATXXXXXXXXXXXXXXXXXXXXXKGRAKGKTYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKLPTKTEATVASSKSSAXXXXXXXXXXXXXGKPRGARAKGRGGKVAAXXXXXXXXXXXXXATKVPERTEKAPTWSGVTCLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTSHNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIETKEPGDG---QAGGEVQDENEQGERLGAAAEEMARTGGVGVDAGGAFAGVGPRNG--------------APKPDQDPANHRPSLENTGLRGRAKEVYDVMRANLEKQGRR-RPGGNSKRG--GFRVA----EKSRVSLWRVQHDVDSDDVVRQNQIGGSSRGVGVGHEETDFERFGPVDEL 581
            M  TRAW EGELRRMLGFDEVEEIARFALDS+ VSQ  EL+QYLEQFLGQS   + L   +  ++             G  RG     A+  EDFWG G +SG                          R K  +                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    G   T T+  V   + S+         XXXX                 XXXXXXXX       +        P WSGVTCLCMGK HD +TNCT CGKIACV+EGGFGCSFCG  LP TGREPR +            V G        SAALKEAL RKDRL+LFDRTSASRTRVLDDQGDYFTSHNWLS+ ERE+GEA+EK  RD+AA RRGARRQVK+SIDIMGRRVIET    DG     GG     +E   R         +T GV +D G                         A  P     N R SLENTGLRGRAKEVYDVMRANL+K+ RR RPGG   +   G R+     E SRV+LWRVQHDVDSDD++RQ+Q  G             F +F P DEL
Sbjct:    1 MAKTRAWFEGELRRMLGFDEVEEIARFALDSFPVSQPVELRQYLEQFLGQSRGGKSLLTAEGGNNXXXXXXXXXXXXXGKGRGKVYQKAAVEEDFWGGGTTSG--------------------------RVKPAS--------------APSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAGGATGTATKGDVGGGRVSSKQPLASSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTALPETLPAPAPVPEWSGVTCLCMGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSATSGG--------VDGAAGAAAPHSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKARRDDAASRRGARRQVKMSIDIMGRRVIETHPGEDGGLADGGGGEXXADEDASR---------KTQGVSLDFGSXXXXXXXXXXXXXXXXXXXXXAEEADTPGAGNGNQRLSLENTGLRGRAKEVYDVMRANLDKKSRRQRPGGAGGKAVAGSRIVGAVPEASRVNLWRVQHDVDSDDLLRQSQASGXXXXXXX-XXXXGFGKFEPADEL 552          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: D7FU14_ECTSI (Similar to thyroid hormone receptor interactor 4 isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU14_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 6.830e-95
Identity = 183/325 (56.31%), Postives = 217/325 (66.77%), Query Frame = 0
Query:  275 MGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTSHNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIETKEPGDGQA---GGEVQDENEQGERLGAAAEEMARTGGVGVDAGGAFA------GVGPRNGAPKPDQDPANHRPSLENTGLRGRAKEVYDVMRANLEKQGRRR----PGGNSKRGGF---RVAEKSRVSLWRVQHDVDSDDVVRQNQIGGSSRGVGVGHEETDFERFGPVDELGC 583
            MGK HD +TNCT CGKIACV+EGGFGCSFCG  LP TGREPR +       + G+T          QSAALKEAL RKDRL+LFDRTSASRTRVLDDQGDYFTSHNWLS+ ERE+GEA+EKV RD+AA RRGARRQVK+SIDIMGRRVIET++PG+G+A   GGE + +++  ++    + +   +   G  A G+ A       +G   G         N R SLENTGLRGRAKEVYDVMRANL+K+ RRR     GG +  G      V E SRV+LWRVQHDVDSDD++RQ+Q  G             F +F P DEL C
Sbjct:    1 MGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSAASGGVDGAAGATA--------PQSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKVRRDDAASRRGARRQVKMSIDIMGRRVIETQDPGEGRADGGGGEGEADDDASKKTQGVSLDFGSSSAAGGGAAGSSAXXXXXGSIGEEAGTSGAGN--GNQRLSLENTGLRGRAKEVYDVMRANLDKKSRRRRPRGAGGKAVAGSRIVGAVPETSRVNLWRVQHDVDSDDLLRQSQASGXXXXXXX-XXXXGFGKFEPADELAC 314          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: UPI00077AD339 (activating signal cointegrator 1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AD339)

HSP 1 Score: 105 bits (263), Expect = 1.850e-20
Identity = 67/164 (40.85%), Postives = 102/164 (62.20%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDS--EGSTVAGVE-AVDPTQSAA---LKEALARKDRLILFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIETKE 427
            C C+G+KH  I NC  CG+I C++EG   C FCG+++  T  +   + +SK+     E      +E A + T S A   L+EA+A K++LI FD++   RT+V+DD+ DYF S  + WLS+ ER+    KE+  R++   R G+RRQ+K+++D  GRRVI+ KE
Sbjct:  134 CECLGQKHQLINNCIECGRIVCMQEGSGPCYFCGALVCSTEEKEILAQKSKKSQKLYEKLLTRSIEDASEETLSVADKGLQEAIAHKNKLIEFDKSGVRRTKVIDDECDYFASDSNRWLSKRERDTLRKKEEDLREK---RHGSRRQMKVTLDFAGRRVIDEKE 294          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: A7RPW2_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RPW2_NEMVE)

HSP 1 Score: 99.8 bits (247), Expect = 1.820e-18
Identity = 59/167 (35.33%), Postives = 100/167 (59.88%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVL------PVTGREPRRSGE------SKRGDSEGSTVAGVEAVDPTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIE 424
            C C+G+KH  + NCT CG+I C +EG   C FCG+++       +  RE ++S +      S+    E  +   +   +      L +A+A K++L+ +D+TS  RT+V+DD+ DYF++  + WLS++E+E+   KE+  R   A+R G+RR +K+++D  GRRV+E
Sbjct:  125 CECLGQKHGLVNNCTSCGRIVCDQEGAGPCYFCGALVCSRAEQEIIARESKKSAKLLKQLMSQEFSEEVKSQGRMGTSNGKDLQGLDKAIAHKNKLLEYDKTSVCRTKVIDDECDYFSTDGNKWLSKKEKEQLTVKEEELR---AKRHGSRRDMKITLDFAGRRVVE 288          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: A0A0C9R7G9_9HYME (Trip4_1 protein n=2 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9R7G9_9HYME)

HSP 1 Score: 99.0 bits (245), Expect = 2.940e-18
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 0
Query:  270 VTCLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTSHN--WLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIETKE 427
            V C C  K H  I NC  CG+I C +EG   C FCG ++    ++   S  SK  D+  + +         +    K AL ++D+L+ FDR SA RTRV+DD+ DY+ S N  WLS+EER E E +E   ++   ++ G+R + K ++DI GR+V+E ++
Sbjct:  132 VKCDCEAKTHKLINNCLTCGRIVCEQEGAGPCFFCGELVCTPNQQNVLSTNSKNSDNLYNKL--------MEQKPSKAALKQRDKLLEFDRNSAKRTRVIDDESDYYQSSNSVWLSKEERAEMERREAEMKE---RKYGSRLEKKFTVDIFGRQVVEEED 280          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: A0A6P8GZP8_ACTTE (activating signal cointegrator 1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8GZP8_ACTTE)

HSP 1 Score: 97.1 bits (240), Expect = 1.360e-17
Identity = 60/166 (36.14%), Postives = 98/166 (59.04%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVL------PVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKE------ALARKDRLILFDRTSASRTRVLDDQGDYF-TSHNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIE 424
            C C+ +KH  I NCT CG+I C +EG   C FCGS++       +  R+ ++S +  +   +      V+ +   ++ + +E      A+  K++L+ FD+TSA RT V+DD+ DYF T+  WLS EER + E KE+  R++   R G+RR +K+++D  GR+V+E
Sbjct:  134 CECLAQKHSLINNCTSCGRIVCEQEGEGPCYFCGSLVCTKAQKEILARDSKKSAKLLKQLMQQDFSDDVKKLQKXKNMSAQELEGYQRAVEHKNKLLEFDKTSARRTHVIDDEADYFSTNSKWLSTEERTKLEKKEEELREK---RHGSRRNMKVTLDFAGRKVVE 296          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: E9GBD9_DAPPU (ASCH domain-containing protein n=4 Tax=Daphnia TaxID=6668 RepID=E9GBD9_DAPPU)

HSP 1 Score: 96.3 bits (238), Expect = 2.190e-17
Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVD---PTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFT--SHNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIE 424
            C C   KH  + NC  CG++ C +EG   C FC   +    +E     +S    ++ +  +G   +D   P    A   A+A K++L+ FDRTS  RTRV+DD+ DYF   S+ WL+ ++R+    KEK  RD    R G+RRQ+K+++D  GR+VIE
Sbjct:  129 CECQASKHSLVRNCLECGRVICAQEGPGPCVFCTENMSACEKEALL--QSNNAPAQRTKQSGRRFLDGTAPLPDKAFTTAMAHKEKLLEFDRTSEHRTRVIDDESDYFNADSNKWLNPKQRDALRTKEKELRDS---RHGSRRQIKVTLDFAGRQVIE 281          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: A0A3M6TYR9_POCDA (ASCH domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TYR9_POCDA)

HSP 1 Score: 95.9 bits (237), Expect = 3.190e-17
Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDS--EGSTVAGVEAVDPTQ-SAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIETKEP 428
            C C+ +KHD + NCT CG+I C +EG   C F          +   +  SK+     E     G+E    T+    L+ A+A K+RLI +D++   RT+V+DD+ DYF S  + WLS+EERE  + KE   R++   R G+RRQ+K+++D  GR+V++  EP
Sbjct:  133 CECLAQKHDLVNNCTDCGRIVCKQEGSGPCFFXXXXXXTKEEQEILARNSKKSHKLHEKLLKQGIENDSCTKLGEGLQRAIAHKNRLIEYDKSGVRRTKVIDDECDYFASDTNKWLSQEEREVLKKKENEVREK---RYGSRRQMKVTLDFAGRKVVDENEP 291          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: UPI001ED8B920 (activating signal cointegrator 1 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B920)

HSP 1 Score: 95.5 bits (236), Expect = 4.460e-17
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTSHN-WLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIE 424
            CLC   KH  I NC  CG+I C +EG   C FCG+++      P   G    G +  + +  ++ +  T+S   +EA+AR+DRL+ +DRT   RT+V+DD+ DYF+S + WLS+EEREE   +E   +++   R  +R+   +S D  GRRVIE
Sbjct:  141 CLCQASKHGLINNCIQCGRIICEQEGPGPCLFCGNLV-----YPPGEGMEMPGIASETQIQYMKQM-ATKSPEWEEAMARRDRLLEYDRTCEKRTKVIDDEMDYFSSSSPWLSKEEREELRKRELELKEK---RDSSRKNKTISFDFAGRRVIE 285          
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Match: A0A7R9FI96_9NEOP (Hypothetical protein n=1 Tax=Timema tahoe TaxID=61484 RepID=A0A7R9FI96_9NEOP)

HSP 1 Score: 95.9 bits (237), Expect = 4.580e-17
Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 0
Query:  272 CLCMGKKHDAITNCTVCGKIACVEEGGFGCSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKEALARKDRLILFDRTSASRTRVLDDQGDYFTSHN-WLSREEREEGEAKEKVHRDEAAQRRGARRQVKLSIDIMGRRVIETKEPGD 430
            C C   KH  I NC  CG+I C +EG   C FC +++     +      SK+GD     + G    D       + AL  +DRL+ +DRTS  RTRV+DD+ DYF +++ WLS  ERE+   KEK  RD+   R  +R   ++++D  GR+V+E ++ GD
Sbjct:  166 CECQASKHRLINNCLKCGRIVCEQEGSGPCLFCYTLVCSQDEQTMLQSGSKQGDKLYQKLMGGAKQDT------ETALQHRDRLLEYDRTSERRTRVIDDESDYFAANSVWLSSAEREKMREKEKEQRDK---RHASRLDKRVTLDFAGRQVLEEEDGGD 316          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFY4_9PHAE3.520e-10350.00zf-C2HC5 domain-containing protein n=1 Tax=Ectocar... [more]
D7FU14_ECTSI6.830e-9556.31Similar to thyroid hormone receptor interactor 4 i... [more]
UPI00077AD3391.850e-2040.85activating signal cointegrator 1-like n=2 Tax=Acro... [more]
A7RPW2_NEMVE1.820e-1835.33Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A0C9R7G9_9HYME2.940e-1837.50Trip4_1 protein n=2 Tax=Fopius arisanus TaxID=6483... [more]
A0A6P8GZP8_ACTTE1.360e-1736.14activating signal cointegrator 1-like n=1 Tax=Acti... [more]
E9GBD9_DAPPU2.190e-1737.34ASCH domain-containing protein n=4 Tax=Daphnia Tax... [more]
A0A3M6TYR9_POCDA3.190e-1737.65ASCH domain-containing protein n=1 Tax=Pocillopora... [more]
UPI001ED8B9204.460e-1739.61activating signal cointegrator 1 n=1 Tax=Ischnura ... [more]
A0A7R9FI96_9NEOP4.580e-1737.50Hypothetical protein n=1 Tax=Timema tahoe TaxID=61... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009349Zinc finger, C2HC5-typePFAMPF06221zf-C2HC5coord: 271..308
e-value: 4.3E-8
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..187
IPR039128Activating signal cointegrator 1-likePANTHERPTHR12963THYROID RECEPTOR INTERACTING PROTEIN RELATEDcoord: 15..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:604036..607024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.64.1mRNA_A-nodosum_M_contig99.64.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 603984..607251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.64.1 ID=prot_A-nodosum_M_contig99.64.1|Name=mRNA_A-nodosum_M_contig99.64.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=585bp
MGDTRAWLEGELRRMLGFDEVEEIARFALDSYSVSQAAELKQYLEQFLGQ
SEEVRKLCDELSSRRSVATSLSAPKTGSTRGPHASAGEDFWGAGGSSGAA
TRAATAPGGGARGQEHERKSAAKGRAKGKTYKKSTTEEEDFWGGGTTGGT
TSGGQSSSTKSATNRPTPAAASAPRSARNSGGNQKGSAGGGSGKLPTKTE
ATVASSKSSARQEQGTSSAAASAGKPRGARAKGRGGKVAAGARTPGPAKT
VPSATKVPERTEKAPTWSGVTCLCMGKKHDAITNCTVCGKIACVEEGGFG
CSFCGSVLPVTGREPRRSGESKRGDSEGSTVAGVEAVDPTQSAALKEALA
RKDRLILFDRTSASRTRVLDDQGDYFTSHNWLSREEREEGEAKEKVHRDE
AAQRRGARRQVKLSIDIMGRRVIETKEPGDGQAGGEVQDENEQGERLGAA
AEEMARTGGVGVDAGGAFAGVGPRNGAPKPDQDPANHRPSLENTGLRGRA
KEVYDVMRANLEKQGRRRPGGNSKRGGFRVAEKSRVSLWRVQHDVDSDDV
VRQNQIGGSSRGVGVGHEETDFERFGPVDELGCN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009349Znf_C2HC5
IPR039128TRIP4-like