prot_A-nodosum_M_contig99.35.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.35.1
Unique Nameprot_A-nodosum_M_contig99.35.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length60
Homology
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5JYE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE2_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.230e-15
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG+L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:   59 VEATIRQRRLLFAGSLARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 118          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.860e-14
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  191 VEPTIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 250          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5JFE2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE2_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.070e-14
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  321 VEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 380          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.170e-14
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  454 VEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 513          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.530e-13
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D+ AFG
Sbjct:  543 VEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAFG 602          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5K1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X4_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 5.310e-13
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG L R   GRLPKR+M G L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  215 VEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 274          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5K2V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V4_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 4.730e-11
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL A  L R   GRLPKR+M G L G  +R RGG+++ W  CV  D++AFG
Sbjct:  171 VEATIRQRRLLLARALARQPDGRLPKRLMLGELAGGEKRRRGGQKQNWPKCVLDDLKAFG 230          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5KQ16_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ16_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 7.430e-11
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIR 57
            +  T+R RR+L+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++
Sbjct:  191 VAATIRQRRILFAGALTRQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLK 247          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5JTZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ8_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.230e-10
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            +E T+R RRLL+AG + R   GRLPKR++ G L G  +R   G+E+ W  CV  D++AFG
Sbjct:  172 VEATIRQRRLLFAGAMARQPDGRLPKRLVLGELAGGEKRRSAGQEQNWPKCVLDDLKAFG 231          
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Match: A0A6H5K2V9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V9_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.740e-10
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:   11 LWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 60
            L+AG L R   GRLPKR+MFG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  287 LFAGALARQPDGRLPKRLMFGELAGGEKRSRGGQEQNWPKCVLDDLKAFG 336          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.35.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYE2_9PHAE8.230e-1556.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JAH7_9PHAE3.860e-1456.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFE2_9PHAE8.070e-1456.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE8.170e-1456.67Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KS82_9PHAE1.530e-1356.67Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1X4_9PHAE5.310e-1355.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2V4_9PHAE4.730e-1151.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ16_9PHAE7.430e-1150.88Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JTZ8_9PHAE1.230e-1048.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2V9_9PHAE2.740e-1056.00Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:362015..362194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.35.1mRNA_A-nodosum_M_contig99.35.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 362015..362846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.35.1 ID=prot_A-nodosum_M_contig99.35.1|Name=mRNA_A-nodosum_M_contig99.35.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=60bp
METTLRTRRLLWAGTLLRMSGGRLPKRIMFGNLEGAVRRGRGGKEKEWTD
CVQSDIRAFG
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