prot_A-nodosum_M_contig99.27.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.27.1
Unique Nameprot_A-nodosum_M_contig99.27.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length347
Homology
BLAST of mRNA_A-nodosum_M_contig99.27.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 8.860e-105
Identity = 179/294 (60.88%), Postives = 213/294 (72.45%), Query Frame = 0
Query:   56 DSVAPSRILLPSLVFHVLVFLCLATEIPIYACRYASTVTHRDSDAWFCEVGRSYYALHLTSYLLLFSAFCVIATLWSDVAVFEPTKWTVLMNRLMLILCLVYLLVTGVAVSVCLGLGGVKFFFSSYVFLFFCAYSIAALLLLGSSFLVLGCLLQRRICRVLVTGSCTATITARVVRLNVVMLACFVCFTTRAVMLATLVVAQAQGEKHRQFEEGWKRWEWDLRLEWVPHLIPCVAMLYLMRNSGAPDSEAEEDA---AQREERGDLKEGEDRGDGLRPDEKARSGYGSCGPVQN 346
            D VA SR+++PSL+FHVLVFLCLA E+P+YACR+ S+           +  RS YALH+TSYLLLF AF V+ TLW+DVAVFEP + T LMNR M+ LC+ Y+LVTG+AVSVCLG+G VK+F SS+ FL FCAYSIA LLLLG+SFLVLGCLLQ+RICRVLVTGSCTA +TAR+VRLNVVMLACF CFT RA+MLA L+ AQA+GE+   +  GWKR E D+RLEW  H+IPCVAMLYLMR +G P S +   A   A +E  GD   G    D          GYG   P  N
Sbjct:   62 DRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSS---SGIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKEYGGDESTGFSGAD-------VEDGYGEQAPGSN 345          
BLAST of mRNA_A-nodosum_M_contig99.27.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.740e-59
Identity = 145/348 (41.67%), Postives = 190/348 (54.60%), Query Frame = 0
Query:    8 LVGLVSMCVVSATALTRLIVVLRIFRRQRAGYRRDNISP----------GRINGNSTPDSVAPSR-ILLPS-LVFHVLVFLCLATEIPIYACRYASTVTHRDSDAWFCEVGRSYYALHLTSYLLLFSAFCVIATLWSDVAVFEPTKWTVLMNRLMLILCLVYLLVTGVAVSVCL-GLGGVKFFFSSYVFLFFCAYSIAALLLLGSSFLVLGCLLQRRICRVL------------------------------------------VTGSCTATITARVVRLNVVMLACFVCFTTRAVMLATLVVAQAQGEKHRQFEEGWKRWEWDLRLEWVPHLIPCVAMLYLMRNSGA 300
            L GLV+  + +A A  RL+VVLR   R   G+RR    P           + +  +T D   P    LLP   +FHVLVFLCLA E+P+YA  Y   VT R  D  F EVGR  YALHLTSYLLL +AFC+I  LWS VA FEP+ W +L NRL+L+LC++Y LVT VAV  CL      + +F+S  F+ FCA+SI ALLLL + FLVLGCL+Q+RIC  L                                                  +T  V+RLN V+L CFVCF+ RA++L  L+  +  G        GW RW+ ++ +EW+P+++PC+A+LYLMR   A
Sbjct:    9 LAGLVTTALAAAIAAWRLLVVLRQVWRY-GGWRRVLAEPFSKDAYEDLDRQPHHYATQDQTLPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHY---VTLRGQDVSF-EVGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALG---GWTRWQQEVYVEWIPNVVPCLALLYLMRGDVA 348          
BLAST of mRNA_A-nodosum_M_contig99.27.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.490e-26
Identity = 98/307 (31.92%), Postives = 152/307 (49.51%), Query Frame = 0
Query:    8 LVGLVSMCVVSATALTRLIVVLRIFRRQRAGYRRDNISPGRIN---GNSTPDSVAPS-RILLPSLVFHVLVFLCLATEIPIYAC-RYASTVTHRDSDAWFCEVGRSYYALHLTSYLLLFSAFCVIATLWSDVAVFEP-TKWTVLMNRLMLILCLVYLLVTGVAVSVCLGLGGVKFFFSSYVFLFFCAYSIAALLLLGSSFLVLGCLLQRRICRVLVTGSC-TATITARVVRLNVVMLACFVCFTTRAVMLATLVVAQAQ-----GEKHRQFEEGWKRWEWDLRLEWVPHLIPCVAMLYLMRNSGAPD 302
            LVGL    V++  AL R IV  +  R Q++      I PG IN   GN  P + +P   ++   L+FH L+ L L  +IP+Y C   A +    DS   + E     Y +++ SY LLF AFC++  LW+ + +F   ++W +++ R ++ +C++Y L +  A   C+    +  +  S  ++ F    I  L  L  +FL++GC+LQ RICR L           A V RLN V+  C + F  RA +L   + A A                     W +  EWVPHL PC+A++YL+RN+  P+
Sbjct:    6 LVGLALTGVLTLLALFRTIVYYKANRLQQSLRDTWVIFPGIINLLCGND-PYAYSPYFPVVQQKLLFHQLILLSLMLQIPLYVCYAIAGSQGEEDSSERYFEY---LYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWLVLAEWVPHLAPCIALMYLLRNASGPE 308          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN17_ECTSI8.860e-10560.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B0_9STRA4.740e-5941.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XM64_HETAK1.490e-2631.92Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:252605..256701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.27.1mRNA_A-nodosum_M_contig99.27.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 252540..257949 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.27.1 ID=prot_A-nodosum_M_contig99.27.1|Name=mRNA_A-nodosum_M_contig99.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=347bp
MRERTMLLVGLVSMCVVSATALTRLIVVLRIFRRQRAGYRRDNISPGRIN
GNSTPDSVAPSRILLPSLVFHVLVFLCLATEIPIYACRYASTVTHRDSDA
WFCEVGRSYYALHLTSYLLLFSAFCVIATLWSDVAVFEPTKWTVLMNRLM
LILCLVYLLVTGVAVSVCLGLGGVKFFFSSYVFLFFCAYSIAALLLLGSS
FLVLGCLLQRRICRVLVTGSCTATITARVVRLNVVMLACFVCFTTRAVML
ATLVVAQAQGEKHRQFEEGWKRWEWDLRLEWVPHLIPCVAMLYLMRNSGA
PDSEAEEDAAQREERGDLKEGEDRGDGLRPDEKARSGYGSCGPVQN*
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