prot_A-nodosum_M_contig99.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.15.1
Unique Nameprot_A-nodosum_M_contig99.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length713
Homology
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BLAST of mRNA_A-nodosum_M_contig99.15.1 vs. uniprot
Match: D7FU29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU29_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.510e-20
Identity = 81/182 (44.51%), Postives = 99/182 (54.40%), Query Frame = 0 
Query:    1 MSAMIVPKRFGLKYSPKPAIALEFEATAAASDPELGILEVYVEQLSPSTCDVPGVVHALQKAYPRHLGASVVSTAQLERLVDRLLENGKTYLPECFSGGSEVTREEV----RGISADAVLPVK---PYIPGAKICGND-DSEDSDYLPKKSDPAPTPGGQETGAIFRTTRNTQVSADGVDLS 174
            MS  IVPKRFGLKYSPKPAIALE++   A     + I+EV +EQLSP T DV GVV ALQK +P HLG  +VS  QLERLV RLL  G+ +LP    G   +T E++          +  P K   P  P       D DS++S  L     PAPTP       + R TR+     DG+  S
Sbjct:    1 MSGQIVPKRFGLKYSPKPAIALEYQKPDAG----IAIVEVQIEQLSPKTFDVSGVVDALQKKHPCHLGPDMVSVNQLERLVWRLLSEGRAHLP----GEYPITPEQMVVNESQHQPSSTTPQKHGHPMQPLLLPKSEDYDSDNSGRLSTGPTPAPTP------EVPRVTRDRSED-DGIITS 167
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU29_ECTSI1.510e-2044.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..611
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 535..555
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..712
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:134490..139020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.15.1mRNA_A-nodosum_M_contig99.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 133916..140400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.15.1 ID=prot_A-nodosum_M_contig99.15.1|Name=mRNA_A-nodosum_M_contig99.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=713bp
MSAMIVPKRFGLKYSPKPAIALEFEATAAASDPELGILEVYVEQLSPSTC
DVPGVVHALQKAYPRHLGASVVSTAQLERLVDRLLENGKTYLPECFSGGS
EVTREEVRGISADAVLPVKPYIPGAKICGNDDSEDSDYLPKKSDPAPTPG
GQETGAIFRTTRNTQVSADGVDLSRLGELRAFHRQKGGDKQLEGASTLVL
NEEAGRKIETKSVSGVVSEGKLSSLDKRRQSKVAFATQEKKQPGVDQSEN
HVEYEGANESANSVFVSRRDRDPNLEDEESELGESILDHDHSPEKLSGGF
DDFEDGDEACEGAAIGAKDGRSSGTKEMVVPKMLDASDGGRARAGTEESR
AAVSVFPAVGDASDDEGDAPRDITPLHVAVKPGIETEGTARSSVNKAVGG
REKSKSTEEVPRPDDNRPKISHYEETSDFGSGSQGSDFPLVLPLPPPSPL
DLAAALGDNEHISPALSSFMESSGSSQQPLSSTGGLSAPSLAEIPLPPVV
GARQRLGLLGCLPHGGGESLSTQGGEPLAPDGKSGNTDINGQKSIQQSSG
FFSSGARPAADSPPEFHRRSNTSTHRCTEGSQDGERGAPGERLREEDKPK
EYGEEKDVDGGISPPESPQQHQGQEEENAGRITESGVDDEPVSVISEGAH
NDGGDCSPREVIESFTNSDVELDIEEQVISDGDSTDESLHFEQESDIDDG
GRRDDGIDDFFS*
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