Homology
BLAST of mRNA_A-nodosum_M_contig99.15.1 vs. uniprot
Match:
D7FU29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU29_ECTSI)
HSP 1 Score: 107 bits (268), Expect = 1.510e-20
Identity = 81/182 (44.51%), Postives = 99/182 (54.40%), Query Frame = 0
Query: 1 MSAMIVPKRFGLKYSPKPAIALEFEATAAASDPELGILEVYVEQLSPSTCDVPGVVHALQKAYPRHLGASVVSTAQLERLVDRLLENGKTYLPECFSGGSEVTREEV----RGISADAVLPVK---PYIPGAKICGND-DSEDSDYLPKKSDPAPTPGGQETGAIFRTTRNTQVSADGVDLS 174
MS IVPKRFGLKYSPKPAIALE++ A + I+EV +EQLSP T DV GVV ALQK +P HLG +VS QLERLV RLL G+ +LP G +T E++ + P K P P D DS++S L PAPTP + R TR+ DG+ S
Sbjct: 1 MSGQIVPKRFGLKYSPKPAIALEYQKPDAG----IAIVEVQIEQLSPKTFDVSGVVDALQKKHPCHLGPDMVSVNQLERLVWRLLSEGRAHLP----GEYPITPEQMVVNESQHQPSSTTPQKHGHPMQPLLLPKSEDYDSDNSGRLSTGPTPAPTP------EVPRVTRDRSED-DGIITS 167
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.15.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
100 200 300 400 500 600 700 Expect = 1.51e-20 / Id = 44.51 Sequence D7FU29_ECTSI
Match Name E-value Identity Description
D7FU29_ECTSI 1.510e-20 44.51 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
100 200 300 400 500 600 700 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 362..444
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 562..611
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 465..486
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 517..712
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 535..555
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 683..712
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 126..155
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 401..424
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 256..285
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_A-nodosum_M_contig99.15.1 ID=prot_A-nodosum_M_contig99.15.1|Name=mRNA_A-nodosum_M_contig99.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=713bp MSAMIVPKRFGLKYSPKPAIALEFEATAAASDPELGILEVYVEQLSPSTC DVPGVVHALQKAYPRHLGASVVSTAQLERLVDRLLENGKTYLPECFSGGS EVTREEVRGISADAVLPVKPYIPGAKICGNDDSEDSDYLPKKSDPAPTPG GQETGAIFRTTRNTQVSADGVDLSRLGELRAFHRQKGGDKQLEGASTLVL NEEAGRKIETKSVSGVVSEGKLSSLDKRRQSKVAFATQEKKQPGVDQSEN HVEYEGANESANSVFVSRRDRDPNLEDEESELGESILDHDHSPEKLSGGF DDFEDGDEACEGAAIGAKDGRSSGTKEMVVPKMLDASDGGRARAGTEESR AAVSVFPAVGDASDDEGDAPRDITPLHVAVKPGIETEGTARSSVNKAVGG REKSKSTEEVPRPDDNRPKISHYEETSDFGSGSQGSDFPLVLPLPPPSPL DLAAALGDNEHISPALSSFMESSGSSQQPLSSTGGLSAPSLAEIPLPPVV GARQRLGLLGCLPHGGGESLSTQGGEPLAPDGKSGNTDINGQKSIQQSSG FFSSGARPAADSPPEFHRRSNTSTHRCTEGSQDGERGAPGERLREEDKPK EYGEEKDVDGGISPPESPQQHQGQEEENAGRITESGVDDEPVSVISEGAH NDGGDCSPREVIESFTNSDVELDIEEQVISDGDSTDESLHFEQESDIDDG GRRDDGIDDFFS* back to top