prot_A-nodosum_M_contig9885.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9885.4.1
Unique Nameprot_A-nodosum_M_contig9885.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length62
Homology
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BLAST of mRNA_A-nodosum_M_contig9885.4.1 vs. uniprot
Match: D7FLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA8_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 6.120e-14
Identity = 33/58 (56.90%), Postives = 51/58 (87.93%), Query Frame = 0 
Query:    2 NISTEDKDIPKLAAAAKEVCKQHGVQVAINGNQKKKGDGGRLVATTLKCVNGMPNRQR 59
            NI T++KDIP+L +A K+VC+QHGV+V+++ + K++G GGR+VATTL+CV+GMP R++
Sbjct:   90 NIPTKEKDIPQLVSAVKDVCEQHGVKVSVSTSSKERG-GGRVVATTLQCVHGMPQRKK 146
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9885.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLA8_ECTSI6.120e-1456.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9885contigA-nodosum_M_contig9885:10368..10553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9885.4.1mRNA_A-nodosum_M_contig9885.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9885 10368..10553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9885.4.1 ID=prot_A-nodosum_M_contig9885.4.1|Name=mRNA_A-nodosum_M_contig9885.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=62bp
ENISTEDKDIPKLAAAAKEVCKQHGVQVAINGNQKKKGDGGRLVATTLKC
VNGMPNRQREVK
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