prot_A-nodosum_M_contig984.2.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig984.2.2
Unique Nameprot_A-nodosum_M_contig984.2.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length329
Homology
BLAST of mRNA_A-nodosum_M_contig984.2.2 vs. uniprot
Match: D8LHS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS6_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 1.250e-104
Identity = 196/338 (57.99%), Postives = 224/338 (66.27%), Query Frame = 0
Query:    2 HPCCQKDVAERTRAAELREELDRVDPSKVAERARKEAFSTSGALSNAQLPQCRRGGRDYPALEEARRAAAAAKAPCWKGKESDERDGCLGEG-----------DSHSDEXXXXXXXXLMYLLDDPELLRMEKVRVEAMQTHAARLKSLRALGFGLHLEVQPSELETVVEGQFRGAGVVVHAYSADSPLCASLDLFLEGKAASYMGTRFVRCLVRPDSTVASKMRIRRVPSLGCYQGGVRVAYTEGLAQFGEGDRVEPGAVQRWLEASGTLEFDPPSLDALRHSGGSA--GHDDAGDEETDGEGGWYDCGLQGCRKSFAHDHFLAAGGEGRGLPPDFDK 326
            HPCCQKD   + RA +LR  LD+VD S++AERARK AFS+  A      P  R GG DYPAL EAR AAA          +   R    G+G           DS    XXXXXXXXL YLLDDPE+ RM ++RVEAM   A RL++LRALGFGLH+EV  S +E    GQFRGAGVV+H Y ADS L ASLDL LE KA SYMGTRFVRC + P+S VA+ MRIRRVP+L CY+GGVR AYTE L+QFG  D V+PGAV+RWL ASGTLEFDPP  +AL   GG    G D  GD+E   E   YDCGL GC K+F HDHFLAAGG G  LP  F +
Sbjct:   38 HPCCQKDSEAKARALKLRSALDKVDLSQIAERARKAAFSSGLAGP----PASRSGGGDYPALREAR-AAAXXXXXXDSRNDGAARGAGYGDGIVEGHNNHSRVDSXXXXXXXXXXXXLDYLLDDPEITRMAQMRVEAMHADATRLQNLRALGFGLHIEVPESGVEEASRGQFRGAGVVLHLYDADSELGASLDLLLEAKAGSYMGTRFVRCRLGPESAVAATMRIRRVPALACYKGGVRTAYTEQLSQFGNSDGVDPGAVERWLVASGTLEFDPPDANALCEGGGLGVVGDDGDGDDEESAEAR-YDCGLDGCHKAFKHDHFLAAGGGG--LPKGFGE 367          
BLAST of mRNA_A-nodosum_M_contig984.2.2 vs. uniprot
Match: B8C7A0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7A0_THAPS)

HSP 1 Score: 112 bits (279), Expect = 2.200e-24
Identity = 100/338 (29.59%), Postives = 147/338 (43.49%), Query Frame = 0
Query:   22 LDRVDPSKVAERARKEAFSTSGALSNAQLPQCRRGGRDYPALEEARR-----AAAAAKAPCWKGKESDERDGCLGEGDSHSDEXXXXXXXXLMYLLDDP----ELLRMEKVRVEAMQTHAARLKSLRALGFGLHLEVQPSELETVVEGQFRGA--------GVVVHAYSADSPLCASLDLFLEGKAASYMGTRFVRCLVRP------DSTVASKMRIRRVPSLGCYQGGVRVAYTEGLAQFGEGDRVEPGAVQRWLEASGTLEFDPPSLDAL----------------RHSGGSAGHDDAGDEETDGEGGWYDCGLQGCRKSFAHDHFLAAGGEGRGL 320
            L + DP   AE+ RK+   TS       L      GR+Y  L EA+R         ++A    G E       + +  S SD+          YLLD+       + M+  R   ++  A + + LR  G+G+H ++ PS +  +    F G+        G VVH Y A SPL  SLDL LEG A+ Y GT+FVR L +       D   + + +   +P L   + G  V+++ GL  F    +VE GAV++WL  +G L   PP + A+                 H G S     + D++ +     Y+CG+ GC KSF H H     G   GL
Sbjct:   57 LHQHDPVAKAEQLRKQQQDTSKISGIYNLDYTDEDGREYELLAEAKREMQMTVEGESEAIIHLGYE-------MKDAGSDSDDEFD-------YLLDEDISNSSEIDMQAQRRAELEAKAEQYQILRQYGYGVHRQIHPSRV--LASAGFGGSCEDGVVPRGAVVHLYDAYSPLSVSLDLCLEGMASRYPGTKFVRGLGKASLLSVNDDDTSHRWKNGHLPMLLALKEGAVVSFSSGLRDFNNAGQVESGAVEQWLGIAGVLSDTPPPMGAVCRVRSEEELRLDNVINLHGGLSCDGMASTDKDAEIVNDRYNCGVDGCNKSFFHQHVGVKNGVQDGL 378          
BLAST of mRNA_A-nodosum_M_contig984.2.2 vs. uniprot
Match: A0A7S2UEH1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEH1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.920e-18
Identity = 101/363 (27.82%), Postives = 151/363 (41.60%), Query Frame = 0
Query:    1 MHPCCQKDVAERTRAAELREELDRVDPSKVAERARKEAFSTSGALSNAQLPQC----RRGGRDYPALEEARRAAAAAKAPCWKGKESDERDGCLGEGDSHSDEXXXXXXXXLMYLLD---------------DPELLRMEKVRVEAMQTHAARLKSLRALGFGLHLEVQPSELETVVE---GQFRGAG---VVVHAYSADSPLCASLDLFLEGKAASYMGTRFVRCLVRP----DSTVASKMRIRRV------PSLGCYQGGVRVAYTEGLAQFGE--GDRVEPGAVQRWLEASGTLEFDPPSLD-----------------ALRHSGGSAGHDDAGDEETDGEGGWYDCGLQGCRKSFAHDH 309
            +  CC++D  +  R   L   L R D   +AER R+        LS     +C       G +YPAL +AR +     +     K   ER+         SD+          YLLD               D  L ++E  R   ++      +S    G+G+H +  P+ +    +    Q RGA    VV+H Y  +S L ASLDLFLE  A  + GT+F+R   R     +S VA K+  ++V      P+L   + GV VA+   L    +    R+EP AVQ WL+ +G L  + P +D                 AL   G         + + D +   Y+CG+ GC K+F+H+H
Sbjct:   28 LEDCCRRDAEDTRRKDALTTTLRRHDRVALAERRRRIGRHLLPDLSFGAGCRCCYDPNGDGGEYPALVDARSSNFVTNS--LTEKTDLERENQAHHQPEESDKNDSDDDSEFDYLLDEDLPGSGEGGEANKGDSLLQQLEDDRRAELELAMLHRESAMQHGYGVHRQFAPARVFRAADLMVSQGRGAAAPAVVLHLYETNSMLSASLDLFLEELAMDFGGTKFMRADGRSTIILESDVADKVFPKKVRPSDDLPALVAIRDGVVVAFCPSLNGLADRSSQRIEPRAVQEWLDRAGVLRTELPRIDDLCRIRPEEDALYESMLALSAVGQQIPFQGKNELQGDDDVNIYNCGVPGCNKAFSHEH 388          
BLAST of mRNA_A-nodosum_M_contig984.2.2 vs. uniprot
Match: B8C799_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C799_THAPS)

HSP 1 Score: 87.4 bits (215), Expect = 1.550e-15
Identity = 74/244 (30.33%), Postives = 106/244 (43.44%), Query Frame = 0
Query:  110 YLLDDP-------ELLRMEKVRVEAMQTHAARLKSLRALGFGLHLEVQPSEL-------ETVVEGQFRGAGVVVHAYSADSPLCASLDLFLEGKAASYMGTRFVRCLVRPDSTVAS------KMRIRRVPSLGCYQGGVRVAYTEGLAQF------GEGDRVEPGAVQRWLEASGTLEFDPPSLDA-----------------LRHSGGSAGHD-DAGDEETDGEGGWYDCGLQGCRKSFAHDH 309
            YLLD+        ++    +  +E+M  H    + +R  G+G+H ++ P  +        +    +    G VVH Y A SPL  SLDL LE  A+ Y GT+F+R L       A       K +   +P +   + G  VA++ GL  F         +RVEP AV++WLE +G L   PP +DA                 L   GG    +        D E   YDCG+ GC KSF H+H
Sbjct:  167 YLLDEDIPSSSEYDMQAQRRAELESMAHH---YEVIRFHGYGVHRQMHPKRVFASAGYGSSTDRDRVTVKGSVVHLYDAYSPLSVSLDLCLEDMASRYPGTKFLRGLGVTSLLFAEGDGGDQKWKKGDLPMVVALKEGRVVAFSSGLRDFYNAGGDQHNERVEPRAVEQWLEHAGVLFDTPPQMDAVCRIRPEEEMLLENLMKLNMQGGLINAEAPTRSRVEDMEEQRYDCGVNGCNKSFFHEH 407          
BLAST of mRNA_A-nodosum_M_contig984.2.2 vs. uniprot
Match: A0A1E7FG97_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG97_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.930e-6
Identity = 70/239 (29.29%), Postives = 102/239 (42.68%), Query Frame = 0
Query:  110 YLLDDPELLRMEKVRVEAMQTHAARLKS---LRAL----GFGLHLEVQPSELETVVEGQFRGAG-------------VVVHAYSADSPLCASLDLFLEGKAASYM-GTRFVRC----LVRPDSTVASKM-------RIRRVPSLGCYQGGVRVAYTEGLAQFGEGDR--VEPGAVQRWLEASGTLEFDPPSLDALRHSGGSAGHDD-----AGDEETDGEGGWYDCGLQGCRKSFAHDH 309
            YLLD+   +  E VR E  +   A L+    +R +    G+G+H ++ P+ +  +  G  R +              VV+H    DS   ASLD +LE + A    GT F+R     ++  DS++A K          R +P+L   + GV V     L     G    +EP AV+ WL+ SG L  D P  D          H D        +    E   Y+CG+ GC KSF H+H
Sbjct:  149 YLLDEDFGMEDEMVR-ELEEQRRAELEYQILMRQIAGYHGYGVHRQMDPNRVLRIA-GLGRDSASNKASSFLPPPSAVVLHLVDPDSTASASLDYYLETELAKECAGTIFLRSGGRSVLLMDSSLAQKSFPSSILDPDRDMPALIAIRDGVVVNACPRLLGLTSGTDGIIEPHAVRHWLDRSGVLLSDAPIQDICMIRPEQEAHMDFVLSNQQKQAPPPEEKRYNCGIDGCHKSFKHEH 385          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig984.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LHS6_ECTSI1.250e-10457.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8C7A0_THAPS2.200e-2429.59Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2UEH1_9STRA2.920e-1827.82Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C799_THAPS1.550e-1530.33Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1E7FG97_9STRA1.930e-629.29Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 131..261
e-value: 1.2E-12
score: 49.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availablePANTHERPTHR21148:SF25PHOSDUCIN-LIKE PROTEIN 1coord: 93..280
IPR045037Phosducin-likePANTHERPTHR21148THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9coord: 93..280
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 97..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig984contigA-nodosum_M_contig984:5364..11528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig984.2.2mRNA_A-nodosum_M_contig984.2.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig984 4770..11566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig984.2.2 ID=prot_A-nodosum_M_contig984.2.2|Name=mRNA_A-nodosum_M_contig984.2.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=329bp
MHPCCQKDVAERTRAAELREELDRVDPSKVAERARKEAFSTSGALSNAQL
PQCRRGGRDYPALEEARRAAAAAKAPCWKGKESDERDGCLGEGDSHSDED
DEEDDDDLMYLLDDPELLRMEKVRVEAMQTHAARLKSLRALGFGLHLEVQ
PSELETVVEGQFRGAGVVVHAYSADSPLCASLDLFLEGKAASYMGTRFVR
CLVRPDSTVASKMRIRRVPSLGCYQGGVRVAYTEGLAQFGEGDRVEPGAV
QRWLEASGTLEFDPPSLDALRHSGGSAGHDDAGDEETDGEGGWYDCGLQG
CRKSFAHDHFLAAGGEGRGLPPDFDKPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045037PhLP
IPR036249Thioredoxin-like_sf