prot_A-nodosum_M_contig984.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig984.17.1
Unique Nameprot_A-nodosum_M_contig984.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length439
Homology
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: A0A6H5KVI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI4_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 3.580e-123
Identity = 249/447 (55.70%), Postives = 300/447 (67.11%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDTVGDGHRDDE-DANGVVSSDVFSLHRQCMELEGKVA--ASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSGGDSDDPDELFGSAQA-RANGGADGAAVEKRDPEADDLMTRFQRGGGELDMSEVAEARESEEMGAEGDESFQGGEEGFSFDADADDNEXXXXXXXXGNRGGGTGK-RSLKGLLWGHETRSSGEGFGISLEEQVEAMHDSLKADLGVSLDEPRGGLDASRFGAALGKDNYGKSTSSWGEA---KTMAELIVASGGDLSRFAGESEDKAETSAADGE-EFLWGCSSKEEEHDQLVSYVSLGCFEPSARIQSLMITSTGQRLRLARDALAERLKVLVAKSALSQLGD 438
            MCPGETKALHLYEARFL+LFE AI+ HGGCVGGAIFV+DGVLV+VG LCDI+AWE+EEVGVSVA+RC+GR EI DV ++DPYIRA+VREV+D VG    D+E + NGVVSSDVFSLHRQC+ELEGK+A  A G                     XXXXXXX      +  D + GSA+     G A GA V       DDLM RFQRGGGELD+S++     + +   +   S  G  E  +    A+D+EXXXXXXXX      +GK + L  LLWGHE   S +GF  SLE+QVEAM+D LKA L VSL+E RGG DA+ FGA   K    +    WG A   KT+A+++           GE     E    DGE ++LWGC+S +EE +QLVS+ SLGCF+PSAR+QSLM+ STG+RLR+ARDALAERLKVLVAKSALSQLGD
Sbjct:   79 MCPGETKALHLYEARFLSLFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIVAWEREEVGVSVALRCIGRCEIGDVTNVDPYIRANVREVRDVVGMDEPDEEGEDNGVVSSDVFSLHRQCVELEGKMATAAGGNVGWEDEGGRGPSPSRRIVADXXXXXXXXXXXXXELFDNVTGSAEEFEGAGSASGAEV-------DDLMERFQRGGGELDLSQLGGGSSNGDYERQISVSIAGAAEDIAAGWQAEDDEXXXXXXXXXXXXXESGKAKGLGDLLWGHEAYES-DGFDSSLEDQVEAMYDCLKAHLTVSLEENRGGADAAAFGATAKKTGGDRP---WGAASGPKTIADVVAXXXXXXXXXGGEMPSSDE---GDGEGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLKVLVAKSALSQLGD 511          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: D8LHT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT1_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.180e-40
Identity = 113/233 (48.50%), Postives = 144/233 (61.80%), Query Frame = 0
Query:  198 MTRFQRGGGELDMSEVAEARESEEMGAEGDESFQGGEEGFSFDADADDNEXXXXXXXXGNRGGGTGK-RSLKGLLWGHETRSSGEGFGISLEEQVEAMHDSLKADLGVSLDEPRGGLDASRFGAALGKDNYGKSTSSWGEA---KTMAELIVASGGDLSRFAGESEDKAETSAADGE-EFLWGCSSKEEEHDQLVSYVSLGCFEPSARIQSLMITSTGQRLRLARDALAERLK 425
            M RFQRGGGELD+S++     + +       S  G  E      +A+D  XXXXXXXX       GK + L  LLWGHE   S +GF  SLE+QVEAM++ LKA L VSL+E RGG DA+ FGAA  K    +    WG A   +T+A+++            E     E    DGE ++LWGC+S +EE +QLVS+ SLGCF+PSAR+QSLM+ STG+RLR+ARDALAERLK
Sbjct:    1 MERFQRGGGELDLSQLGGGSSNGDYERRLSVSIAGAAEDIVAGWEAEDXXXXXXXXXXXXXXXXGGKAKGLGDLLWGHEAYES-DGFDSSLEDQVEAMYECLKAHLTVSLEENRGGADAAAFGAAAKKTGGDRP---WGAASGPQTIADVVXXXXXXXXXXXXEVPPSDE---GDGEGQYLWGCTSPQEEREQLVSFASLGCFDPSARLQSLMLMSTGERLRMARDALAERLK 226          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: D8LHT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT0_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 3.320e-31
Identity = 71/130 (54.62%), Postives = 83/130 (63.85%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDTVGDGHRDDE-DANGVVSSDVFSLHRQCMELEGKVAAS 129
            MCPGETKALHLYEARFL+LFE AI+ HGGCVGGAIFV+D                                    V ++DPYIRA+VREV+D VG    D+E + NGVVSSDVFSLHRQC+ELEGK+A +
Sbjct:   73 MCPGETKALHLYEARFLSLFENAIKNHGGCVGGAIFVDD------------------------------------VTNVDPYIRANVREVRDVVGMDEPDEEGEDNGVVSSDVFSLHRQCVELEGKMATA 166          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: A0A7S0V7U1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V7U1_9CRYP)

HSP 1 Score: 73.9 bits (180), Expect = 2.330e-12
Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = 0
Query:    6 TKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDTVGDGHRDDEDANGVVS-----SDVFSLHRQCMELEGKV 126
            TK LHL+EARFLALFEEA     G +   IF   G L+ VG   ++  WE +EVGV V V CVGRV++ +V+  DPY    V   +D       D  D  G+V       +    H +C+ +  ++
Sbjct:    1 TKTLHLFEARFLALFEEATGSKQGRLVQLIF-NGGDLLGVGCALEVRDWEPQEVGVKVTVVCVGRVKVTEVVGADPYPSVLVEAYED-------DALDDGGLVKCGLLLQECVETHDECVRMTSRL 118          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: A0A7S0TK28_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK28_HEMAN)

HSP 1 Score: 76.6 bits (187), Expect = 1.020e-11
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDTVGDGHRDDEDANGVVSSDVFSLHRQCMELEGKV 126
            + PGETK+LHL+EARFL LFEEA   + G +   I V    L+ VG   ++I W   +VGV V V CVGRV++  V+ + PY  A V+   DT  D  + +E    +     F  H  C+ +  ++
Sbjct:  101 LLPGETKSLHLFEARFLKLFEEATGKNKGRLVQLI-VNGQDLLNVGCALEVIDWHPLDVGVKVKVVCVGRVQVTKVVGMAPYPSALVQAYSDTPLDVDQQEEFDQCLAQ--CFEAHDDCVTISSRL 223          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: L1I495_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I495_GUITC)

HSP 1 Score: 70.1 bits (170), Expect = 3.800e-11
Identity = 40/119 (33.61%), Postives = 54/119 (45.38%), Query Frame = 0
Query:    3 PGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDT-VGDGHRDDEDANGVVSSDVFSLHRQCM 120
            PGETK LHLYEARFLALFEEA+++HGGC                                     VGRV I  +  ++PYI    ++  D  +   H D++  N  +  D+  LH  C+
Sbjct:   30 PGETKKLHLYEARFLALFEEALKLHGGC------------------------------------SVGRVRIEAITGMEPYISVIAKDYHDQRIVPAHSDEQANNNAIVEDILKLHSDCV 112          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: A0A7S3X878_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X878_EMIHU)

HSP 1 Score: 74.7 bits (182), Expect = 3.960e-11
Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEK--EEVGVSVAVRCVGRVEIADVISID-PYIRASVREVQDTVGDGHRDDEDANGVVSSDVFSLHRQCMELEGKVAASG 130
            + PGET+ +HLYEARF+ LF EA   H  C+G  +F   G +  V  L +I  +    EE+GV   ++CVGRV++ ++ + +  Y+   V    D++    R ++DA    ++++  LH    E+E ++  +G
Sbjct:   64 LLPGETRQVHLYEARFITLFSEAASKHHDCLGAVLFTPQGNVASVTSLLEIEEFRTGAEEIGVWANLKCVGRVKLKELETTEFDYLSGGVELFTDSLPTEERAEDDA---AAAELRELHASVREMEERLTKAG 193          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: R1E1S0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E1S0_EMIHU)

HSP 1 Score: 74.7 bits (182), Expect = 1.120e-10
Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEK--EEVGVSVAVRCVGRVEIADVISID-PYIRASVREVQDTVGDGHRDDEDANGVVSSDVFSLHRQCMELEGKVAASG 130
            + PGET+ +HLYEARF+ LF EA   H  C+G  +F   G +  V  L +I  +    EE+GV   ++CVGRV++ ++ + +  Y+   V    D++    R ++DA    ++++  LH    E+E ++  +G
Sbjct:  372 LLPGETRQVHLYEARFITLFSEAASKHHDCLGAVLFTPQGNVASVTSLLEIEEFRTGAEEIGVWANLKCVGRVKLKELETTEFDYLSGGVELFTDSLPTEERAEDDA---AAAELRELHASVREMEERLTKAG 501          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: A0A7S0LS06_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS06_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.260e-10
Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISID-PYIRASVREVQD-TVGDGHRDDEDA 104
            + PGETK +HLYEARF  LFE+A R HGGC+G  +    G +  V  L ++    ++E+GV   ++CVGRV +  +   D  Y+   V  + D T  D  RD EDA
Sbjct:   90 LLPGETKQVHLYEARFTRLFEDAAREHGGCLGQLLLTPAGNVAAVTSLLEVEESRRQEIGVWAQLKCVGRVRLTSLRQTDYQYVLGDVELLSDKTFVD--RDAEDA 193          
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Match: A0A7S3Y7C9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7C9_HETAK)

HSP 1 Score: 71.6 bits (174), Expect = 5.360e-10
Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 0
Query:    1 MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVED--GV-LVKVGHLCDIIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDTVGDGHRDDEDANGVVSSDVFSLHRQCMELEGKVAA 128
            M  GE+K LHLYE+RFL LF++A+         AI VE   G+  + V  L  I  W+K  VGV+  V+C GRV +  V   +PY+ A V  + D      + D  A   ++ +V  LH  C  L  ++AA
Sbjct:   96 MTLGESKTLHLYESRFLELFQDAMIDREELAVQAIIVEQPSGIGFLSVASLLKIEEWDKLAVGVTATVKCTGRVRLRGVTQAEPYLSADVAYLTDDAPGESQGD--AIRALTEEVVGLHASCRGLHLRLAA 224          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig984.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVI4_9PHAE3.580e-12355.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT1_ECTSI3.180e-4048.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHT0_ECTSI3.320e-3154.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0V7U1_9CRYP2.330e-1238.10Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0TK28_HEMAN1.020e-1138.10Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
L1I495_GUITC3.800e-1133.61Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S3X878_EMIHU3.960e-1132.33Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
R1E1S0_EMIHU1.120e-1032.33Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S0LS06_9EUKA1.260e-1041.51Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3Y7C9_HETAK5.360e-1036.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046336Lon protease, N-terminal domain superfamilyGENE3D2.30.130.40coord: 1..92
e-value: 5.0E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..224
NoneNo IPR availablePANTHERPTHR46732ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEINcoord: 2..126
NoneNo IPR availablePANTHERPTHR46732:SF8ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEINcoord: 2..126
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 3..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig984contigA-nodosum_M_contig984:166895..172369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig984.17.1mRNA_A-nodosum_M_contig984.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig984 140538..173693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig984.17.1 ID=prot_A-nodosum_M_contig984.17.1|Name=mRNA_A-nodosum_M_contig984.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=439bp
MCPGETKALHLYEARFLALFEEAIRIHGGCVGGAIFVEDGVLVKVGHLCD
IIAWEKEEVGVSVAVRCVGRVEIADVISIDPYIRASVREVQDTVGDGHRD
DEDANGVVSSDVFSLHRQCMELEGKVAASGGGKKRWARNNASDSSESPSA
RRRRAGRSKSGGDSDDPDELFGSAQARANGGADGAAVEKRDPEADDLMTR
FQRGGGELDMSEVAEARESEEMGAEGDESFQGGEEGFSFDADADDNEDEK
KDDEEGNRGGGTGKRSLKGLLWGHETRSSGEGFGISLEEQVEAMHDSLKA
DLGVSLDEPRGGLDASRFGAALGKDNYGKSTSSWGEAKTMAELIVASGGD
LSRFAGESEDKAETSAADGEEFLWGCSSKEEEHDQLVSYVSLGCFEPSAR
IQSLMITSTGQRLRLARDALAERLKVLVAKSALSQLGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046336Lon_prtase_N_sf
IPR015947PUA-like_sf