prot_A-nodosum_M_contig984.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig984.13.1
Unique Nameprot_A-nodosum_M_contig984.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length190
Homology
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BLAST of mRNA_A-nodosum_M_contig984.13.1 vs. uniprot
Match: D8LHS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS9_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.040e-19
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0 
Query:    1 MSTLSFGFPSLRPSHTEEAWFPRLESDEIAVVAGLEEAMMQHVEQIRKHPYPSYVGASAPE 61
            MSTLSFGFP L+PSHTEEAWFPRLESDEI VV  LE+++ +  +++R HPYP YVG S PE
Sbjct:    1 MSTLSFGFPPLQPSHTEEAWFPRLESDEIVVVGRLEDSVRRAKDKVRLHPYPPYVGQSTPE 61
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig984.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHS9_ECTSI1.040e-1968.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig984contigA-nodosum_M_contig984:112254..140172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig984.13.1mRNA_A-nodosum_M_contig984.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig984 111790..140260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig984.13.1 ID=prot_A-nodosum_M_contig984.13.1|Name=mRNA_A-nodosum_M_contig984.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=190bp
MSTLSFGFPSLRPSHTEEAWFPRLESDEIAVVAGLEEAMMQHVEQIRKHP
YPSYVGASAPEEEDDATADEDDDQEEKRRDASDGLPGFRTGGIPGEEDGV
GMDHETVEDDEEEEEEEDAERLEGDDEDQEVDEADEEIRRRAESTPIMSE
EDTFTVDDDVDMDEGGGGEMVSDEFDFEVDGNVSDSIDI*
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