prot_A-nodosum_M_contig980.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig980.11.1
Unique Nameprot_A-nodosum_M_contig980.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length96
Homology
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BLAST of mRNA_A-nodosum_M_contig980.11.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 8.740e-5
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   25 GNLSCVSVVGALFDTS-PCYQAA-YAFTMNGNTSIEANTVNLAVVVDASRSITTTSSSDNFTRSEWSKEKEFAK 96
            G  SCV V    + T+ PC   + Y+FTM G T++ ANTVN+AV++DAS S++T         ++W   KEFAK
Sbjct:   52 GQESCVQVAYPTWGTNCPCEAGSQYSFTMEGQTTVTANTVNVAVIIDASGSVST---------ADWELSKEFAK 116
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig980.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JRK3_9PHAE8.740e-543.24VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig980contigA-nodosum_M_contig980:39975..40639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig980.11.1mRNA_A-nodosum_M_contig980.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig980 39975..40639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig980.11.1 ID=prot_A-nodosum_M_contig980.11.1|Name=mRNA_A-nodosum_M_contig980.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=96bp
MLLFRATAMMAISRAYCQSTNNTIGNLSCVSVVGALFDTSPCYQAAYAFT
MNGNTSIEANTVNLAVVVDASRSITTTSSSDNFTRSEWSKEKEFAK
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