prot_A-nodosum_M_contig98.78.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.78.1
Unique Nameprot_A-nodosum_M_contig98.78.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length194
Homology
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: D8LK57_ECTSI (PWI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK57_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 7.880e-77
Identity = 126/174 (72.41%), Postives = 141/174 (81.03%), Query Frame = 0
Query:    1 MSSGFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKREVELQHKLAAHDEEMESATSSITRSAPSAEEPS 174
            MSS FFRGT  EQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWI QRITSLLGFEDDIVVGTC+NYLSEEG LDPKKLQLQLTGFLEKST MFMEELW LL+DAQ+S+GGIPSAFLQDKK+E+L            L+ ++  H +E+E   +     AP+ ++ S
Sbjct:    1 MSSNFFRGTTAEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCINYLSEEGKLDPKKLQLQLTGFLEKSTGMFMEELWGLLVDAQSSLGGIPSAFLQDKKQELLXXXXXXXXXXXXLRRRMVEHQQELERTAALAQAHAPTEQDAS 174          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A6H5KM37_9PHAE (PWI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM37_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.170e-75
Identity = 126/174 (72.41%), Postives = 140/174 (80.46%), Query Frame = 0
Query:    1 MSSGFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKREVELQHKLAAHDEEMESATSSITRSAPSAEEPS 174
            MSS FFRGT  EQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWI QRITSLLGFEDDIVVGTCVNYLSEEG LDPKKLQLQLTGFLEKST MFMEELW LL+DAQ+S+GGIPSAFLQDKK+E+L+              ++  H +E+E   +     AP+ ++ S
Sbjct:    1 MSSNFFRGTTAEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWIAQRITSLLGFEDDIVVGTCVNYLSEEGKLDPKKLQLQLTGFLEKSTGMFMEELWGLLVDAQSSLGGIPSAFLQDKKQELLQKXXXXXXXXXXXXRRMVEHQQELERTAALAQAHAPTEQDAS 174          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A7S2SU80_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU80_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.430e-41
Identity = 73/131 (55.73%), Postives = 97/131 (74.05%), Query Frame = 0
Query:    1 MSSGFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEI 131
            MSSGFFRGT+ +QDSRWG+  K+L+++ KF+ VL  KV+  KVN+ VM RWIT+R+T LLGFED+IV+G  +N+L    +  PK+LQL +TGFLEK    F+EELW LL  AQ +  GIP  F++ KKEE+
Sbjct:    1 MSSGFFRGTSVDQDSRWGNTNKRLMKKMKFAAVLGTKVDTGKVNLPVMNRWITERLTQLLGFEDEIVIGLVINFLEANKHPAPKQLQLDVTGFLEKKAGQFVEELWTLLAAAQENKNGIPPQFIEKKKEEL 131          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: S2J644_MUCC1 (PWI domain-containing protein n=3 Tax=Mucor TaxID=4830 RepID=S2J644_MUCC1)

HSP 1 Score: 146 bits (368), Expect = 3.550e-41
Identity = 75/139 (53.96%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    4 GFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVG-TCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKR 141
            GFF+GT+ +QDSR+ + EKKLL+   F    +QKV+MKKVN+DV++ WI+ RIT LLGFED++V+  TC   L EE + DPK++Q+ LTGFLE  T  F+ ELW LL+ AQNS+GGIP+ F++ KK+E+ R + QE +R
Sbjct:    5 GFFKGTSADQDSRFSNKEKKLLKSMSFPPEFDQKVDMKKVNLDVIKPWISNRITELLGFEDEVVIDYTCS--LLEEKDQDPKRMQINLTGFLESKTQAFLSELWNLLLSAQNSVGGIPTEFIEQKKQELRRKQTQEDER 141          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A8H7V7E3_9FUNG (PWI domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V7E3_9FUNG)

HSP 1 Score: 147 bits (371), Expect = 5.810e-41
Identity = 77/139 (55.40%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    4 GFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVG-TCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKR 141
            GFF+GT+ +QDSR+ + EKKLL+   F    +QKV+MKKVN+DV++ WI+ RIT LLG ED+IV+  TC   L EE N DPK++Q+ LTGFLE +T  F+ ELW LL+ AQNS+GGIP+ F++ KKEE+ + K QE +R
Sbjct:    5 GFFKGTSADQDSRFSNKEKKLLKSMSFPPEYDQKVDMKKVNLDVIKPWISNRITELLGLEDEIVIDYTCS--LLEEKNQDPKRMQINLTGFLESNTKKFVTELWNLLLSAQNSVGGIPAIFIEQKKEELRKKKSQEDER 141          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A0C9MPB6_9FUNG (PWI domain-containing protein n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9MPB6_9FUNG)

HSP 1 Score: 146 bits (369), Expect = 2.620e-40
Identity = 75/139 (53.96%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    4 GFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVG-TCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKR 141
            GFF+GT+ +QDSR+ + EKKLL+   F    +QKV+MKKVN+DV++ WI+ RIT LLGFED++V+  TC   L EE + DPK++Q+ LTGFLE  T  F+ ELW LL+ AQNS+GGIP+ F++ KK+E+ R + QE +R
Sbjct:    5 GFFKGTSADQDSRFSNKEKKLLKSMSFPSEFDQKVDMKKVNLDVIKPWISNRITELLGFEDEVVIDYTCS--LLEEKDQDPKRMQINLTGFLESKTQAFLSELWNLLLSAQNSVGGIPTEFIEQKKQELRRKQTQEDER 141          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A367JPG6_RHIAZ (PWI domain-containing protein n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367JPG6_RHIAZ)

HSP 1 Score: 145 bits (365), Expect = 4.640e-40
Identity = 69/135 (51.11%), Postives = 102/135 (75.56%), Query Frame = 0
Query:    4 GFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQE 138
            GFF+GT+ +QDSR+ + EKKLL+   F    ++KV+MKKVN+DV++ WI  ++T LLGFED++V     + L EE N+DPK +Q+ LTGFLE +  +F++ELW LL+ AQNS+GGIP+ F++ KKEE+ + +E+E
Sbjct:    5 GFFKGTSADQDSRFSNKEKKLLKTMSFPPEFDKKVDMKKVNLDVIRPWIANKVTELLGFEDEVVADYAASLLEEE-NIDPKMMQINLTGFLENNAKVFVKELWNLLLSAQNSVGGIPAIFIEQKKEELRKKRERE 138          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: K8Z0N4_NANGC (Serine/arginine repetitive matrix protein 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0N4_NANGC)

HSP 1 Score: 142 bits (359), Expect = 4.880e-40
Identity = 68/132 (51.52%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    1 MSSGFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKS-TSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEI 131
            M+SGFFRGT  +QD+R+G+AEK+L+++ KF+ +L +KV+++KVNMDV++RWIT ++   LGFE+++ +G  +NYL  E + D KKLQLQ T F+ K+  S F+ ELW LL+DAQ +  GIP+AF++ KK+E+
Sbjct:    1 MASGFFRGTTADQDARFGNAEKRLMKKMKFASILSEKVDLRKVNMDVIKRWITDQLVEFLGFEEEVTIGLVINYL--ESDTDAKKLQLQCTEFIGKNKASTFVTELWALLVDAQRNPSGIPTAFIEAKKKEL 130          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A1X2GZS3_SYNRA (PWI domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2GZS3_SYNRA)

HSP 1 Score: 143 bits (360), Expect = 6.260e-40
Identity = 73/143 (51.05%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    4 GFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKREVELQ 146
            GFF+GT+ +QDSR+ + EKKLL+   F    +QKV+MKKVN+DVM+ WI+ RIT LLGFED++V+   +  L EE   DP+++Q+ LTGFLEK+T  F+ +LW LL+ AQ SIGG+P  FL+ KK E+ ++K  E +R +  Q
Sbjct:    5 GFFKGTSADQDSRFSNKEKKLLKSMTFPPEFDQKVDMKKVNLDVMRPWISTRITELLGFEDEVVIDFTIGLLEEE-KPDPRRMQINLTGFLEKNTQTFILDLWKLLLSAQGSIGGVPQEFLEAKKRELQQSKRDEAERSLRQQ 146          
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Match: A0A836CG50_9STRA (PWI domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG50_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.770e-40
Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 0
Query:   22 KKLLRRTKFSKVLEQKVNMKKVNMDVMQRWITQRITSLLGFEDDIVVGTCVNYL---SEEGNLDPKKLQLQLTGFLEKSTSMFMEELWVLLIDAQNSIGGIPSAFLQDKKEEIL 132
            KK+ +   FSK LE KV+MKKVN+ VM +WIT +IT LLG+EDDIV+GT +N+L   ++   LDP+KLQLQLTGFLEK+T  FMEELW LL DAQ   GGIP+AFL+ KKEE+L
Sbjct:    6 KKMAKADMFSKTLELKVDMKKVNLPVMSKWITGKITQLLGYEDDIVIGTAINFLEASADSARLDPRKLQLQLTGFLEKATRPFMEELWALLADAQACPGGIPAAFLEQKKEEML 119          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK57_ECTSI7.880e-7772.41PWI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KM37_9PHAE1.170e-7572.41PWI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2SU80_9STRA1.430e-4155.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
S2J644_MUCC13.550e-4153.96PWI domain-containing protein n=3 Tax=Mucor TaxID=... [more]
A0A8H7V7E3_9FUNG5.810e-4155.40PWI domain-containing protein n=1 Tax=Mucor saturn... [more]
A0A0C9MPB6_9FUNG2.620e-4053.96PWI domain-containing protein n=1 Tax=Mucor ambigu... [more]
A0A367JPG6_RHIAZ4.640e-4051.11PWI domain-containing protein n=1 Tax=Rhizopus azy... [more]
K8Z0N4_NANGC4.880e-4051.52Serine/arginine repetitive matrix protein 1 n=1 Ta... [more]
A0A1X2GZS3_SYNRA6.260e-4051.05PWI domain-containing protein n=1 Tax=Syncephalast... [more]
A0A836CG50_9STRA6.770e-4063.16PWI domain-containing protein (Fragment) n=1 Tax=T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..155
NoneNo IPR availableGENE3D1.20.1390.10PWI domaincoord: 32..126
e-value: 9.2E-35
score: 120.7
NoneNo IPR availablePANTHERPTHR23148:SF0SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1coord: 1..176
NoneNo IPR availablePANTHERPTHR23148SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINcoord: 1..176
IPR002483PWI domainSMARTSM00311pwi_2coord: 40..115
e-value: 6.6E-25
score: 98.7
IPR002483PWI domainPFAMPF01480PWIcoord: 46..115
e-value: 5.8E-28
score: 97.0
IPR002483PWI domainPROSITEPS51025PWIcoord: 27..126
score: 35.130119
IPR036483PWI domain superfamilySUPERFAMILY101233PWI domaincoord: 26..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:830734..844595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.78.1mRNA_A-nodosum_M_contig98.78.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 830623..844658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.78.1 ID=prot_A-nodosum_M_contig98.78.1|Name=mRNA_A-nodosum_M_contig98.78.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=194bp
MSSGFFRGTNTEQDSRWGDAEKKLLRRTKFSKVLEQKVNMKKVNMDVMQR
WITQRITSLLGFEDDIVVGTCVNYLSEEGNLDPKKLQLQLTGFLEKSTSM
FMEELWVLLIDAQNSIGGIPSAFLQDKKEEILRAKEQERKREVELQHKLA
AHDEEMESATSSITRSAPSAEEPSRLLLSPSNFCTCRKPTIHV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002483PWI_dom
IPR036483PWI_dom_sf