prot_A-nodosum_M_contig98.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.2.1
Unique Nameprot_A-nodosum_M_contig98.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length211
Homology
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: D7FN49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN49_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 8.050e-54
Identity = 85/171 (49.71%), Postives = 118/171 (69.01%), Query Frame = 0
Query:   16 ALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQLCKHRMTGSRSSTEDSRQISEDRLGPYISSV 186
            ++V  ++D+++ GVR +DS  WD+HQ  LSP +FS+R   ELG+   F+ P+AQSI +QL+++    P W  +GT+A A EN+Q + ID+RFRS+I+RDR+QWDVNC  NSPE FAR TVADL LPQEME  IA + HQQ+ + RM    S+T +     +D  GP +SS 
Sbjct:   11 SVVCCNVDVEIGGVRFVDSVMWDIHQSSLSPLEFSRRTCAELGIGVSFVQPIAQSIGQQLIEYGRKNPMWAVEGTIAPAGENIQTVIIDVRFRSVIFRDRLQWDVNCPYNSPEQFARITVADLNLPQEMEPIIALTTHQQVSRFRMAAPSSTTNNEDAQFKDVEGPCVSSA 181          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A484E0B6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0B6_BRELC)

HSP 1 Score: 119 bits (299), Expect = 5.390e-28
Identity = 74/204 (36.27%), Postives = 110/204 (53.92%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL----------CKHRMTGSRSSTEDSR-QISEDRLGPYISSVQPVDQYEFKSRDWSDHRPLSKPT 209
            L+PI +DIDV+G R IDSF+W+L++   + E F+  ++ +L L   F   +A S+  Q+   + A+P W      A   E+L  I I++R    IY DR +WD+N  NNSPE FA+    DLGL  E EA +A S+ +QL           K R+T   S T   R ++  +  GP +  +   D  +F+  D+   RPLS+PT
Sbjct:  139 LIPIRLDIDVEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPNCFYERIATSLREQVQKAQKALP-WHE----AVTRESLHPIFINLRLNDAIYIDRFEWDLNDPNNSPECFAQVVCEDLGLSGEFEAQVALSIREQLYDYSRLIREGLKDRITRLPSVTAALRDRLDAEAWGPSVKYILADDIPQFEREDFKRMRPLSRPT 337          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A0P1B619_PLAHL (Swi snf-related matrix-associated actin-dependent regulator of n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B619_PLAHL)

HSP 1 Score: 115 bits (288), Expect = 1.720e-26
Identity = 70/208 (33.65%), Postives = 108/208 (51.92%), Query Frame = 0
Query:   13 KREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL------CKHRMTGSRSSTEDSRQISEDRL-----GPYISSVQPVDQYEFKSRDWSDHRPLSKPT 209
            + E L+PI +DID++G R IDSF+W+LH+ + + E F+  ++ +L L   F   + +SI  Q+   ++ +P W      A   E+L  I I++R    IY DR +WD+N  +NSPE FA+    DLGL  E EA +A S+ +QL       +       S       +  DRL     GP +  +   D  + +  D+   RPLS+PT
Sbjct:  133 RDELLIPIRLDIDIEGYRFIDSFSWNLHEKEFTFETFAAALVRDLDLPNCFYQRITKSIQEQVHKAQAVLP-WHE----AVTGESLHPIYINLRLCDTIYTDRFEWDLNNTSNSPERFAQVVCEDLGLSGEFEAQVALSIREQLHDYSKLIREGFKDKVSQLPSVTAVFRDRLDVEVWGPSVKYILADDIPQLEREDFKRMRPLSRPT 335          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A329S0R6_9STRA (Uncharacterized protein n=39 Tax=Phytophthora TaxID=4783 RepID=A0A329S0R6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.230e-25
Identity = 71/204 (34.80%), Postives = 109/204 (53.43%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL----------CKHRMTGSRSSTEDSR-QISEDRLGPYISSVQPVDQYEFKSRDWSDHRPLSKPT 209
            L+PI +DIDV+G R IDSF+W+L++   + E F+  ++ +L L   F   +A+SI  Q+   + ++P W      A   E+L  I I++R    IY DR +WD+N  NNSPE FA+    DLGL  E EA +A S+ +QL           K R++     T   R ++  +  GP +  +   D  + +  D+   RPLS+PT
Sbjct:  135 LIPIRLDIDVEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIREQVEKAKKSLP-WNE----AVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSRLIREGLKDRVSRLPPVTAAFRDRLDAEAWGPSVKYILADDIPQLEREDFKRMRPLSRPT 333          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: V9F6J2_PHYPR (HTH cro/C1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=V9F6J2_PHYPR)

HSP 1 Score: 110 bits (275), Expect = 2.800e-25
Identity = 70/204 (34.31%), Postives = 107/204 (52.45%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL----------CKHRMTGSRSSTEDSR-QISEDRLGPYISSVQPVDQYEFKSRDWSDHRPLSKPT 209
            L+PI +DIDV+G R IDSF+W+ ++   + E F+  ++ +L L   F   +A+SI  Q+   +  +P W      A   E+L  I I++R    IY DR +WD+N  NNSPE FA+    DLGL  E EA +A S+ +QL           K R++     T   R ++  +  GP +  +   D  + +  D+   RPLS+PT
Sbjct:  138 LIPIRLDIDVEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIQEQVEKAQKLLP-WSE----AVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQLRDYSRLIREGLKDRVSRLPPVTAAFRDRLDAEAWGPSVKYILADDIPQLEREDFKRMRPLSRPT 336          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A3M6VHY7_9STRA (HMG box domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHY7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.760e-25
Identity = 72/221 (32.58%), Postives = 114/221 (51.58%), Query Frame = 0
Query:    5 AQALLWDIKR-----EALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQLCKHRMT---GSRSSTEDSRQIS---EDRL-----GPYISSVQPVDQYEFKSRDWSDHRPLSKPT 209
            AQ  L+D  +       L+PI +DID++G R IDSF+W+ ++   + E F+  ++ +L L   F   +A+SI  Q+   + ++P W      A   E+L  I I++R    IY D+ +WD+N  NNSPE FAR    DLGL  + EA +A ++ +QL  +      G + S      ++    DRL     GP +  +   D  + +  D+   RPLS+PT
Sbjct:    4 AQRKLYDYPKFPARDTLLIPIGLDIDIEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPDCFYKRIAKSIQEQVEKAQKSLP-WHE----AVTSESLHPIFINLRLNDTIYIDKFEWDLNDPNNSPEQFARVVCEDLGLSGQFEAQVALTIREQLRDYSRLIREGLKDSVTRLPPVTTAFRDRLDTKVWGPSVKFILAEDIPQLEREDFKRMRPLSRPT 219          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: M4BLY5_HYAAE (HMG box domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLY5_HYAAE)

HSP 1 Score: 106 bits (264), Expect = 4.370e-23
Identity = 71/226 (31.42%), Postives = 107/226 (47.35%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQLCKHRMTGSRSSTEDSRQISE----------------------------DRL-----GPYISSVQPVDQYEFKSRDWSDHRPLSKPT 209
            L+PI +DID++G R IDSF+W+L++   + E F+  ++ +L L   F   +A+SI  Q+   +   P W      A   E+L  I I++R    IY DR +WD+N  NNSPE FAR    DLGL  E EA +A  + +QL  +      S  +  R I++                            DRL     GP +  +   D  + +  D+   RPL++PT
Sbjct:  139 LIPIRLDIDIEGYRYIDSFSWNLYEKDFTYETFAAALVRDLDLPDCFYKRIAKSIQEQVEKAQRLFP-WHE----AVTSESLHPIYINLRLNDTIYIDRFEWDLNDSNNSPEQFARVVCEDLGLHGEFEAQVALIIREQLRDYSRVSISSCIDTIRNIADAYSCRYQLIREGLKSRVSKLPPVSAAFRDRLETKVWGPSVKFILADDIPQLEREDFKRMRPLTRPT 359          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A0W8CBZ9_PHYNI (Chromatin structure-remodeling complex protein BSH n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CBZ9_PHYNI)

HSP 1 Score: 103 bits (258), Expect = 1.350e-22
Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL 156
            L+PI +DIDV+G R IDSF+W+ ++   + E F+  ++ +L L   F   +A+SI  Q+   +  +P W      A   E+L  I I++R    IY DR +WD+N  NNSPE FA+    DLGL  E EA +A S+ +QL
Sbjct:  101 LIPIRLDIDVEGYRYIDSFSWNFYEKDFTYETFAAALVRDLDLPNCFYKRIAKSIQEQVEKAQKLLP-WSE----AVTGESLHPIFINLRLNDTIYIDRFEWDLNNPNNSPERFAQVVCEDLGLSGEFEAQVALSIREQL 235          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A507DEV3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DEV3_9FUNG)

HSP 1 Score: 105 bits (261), Expect = 1.530e-22
Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = 0
Query:    3 LPAQALLWDIKR--EALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLS-RGFILPVAQSISRQLLDFRSAMPSWRS-------------DGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL 156
            L A  +  D+K   + LVP+ ID DVDGVRL D+FTW+L +  ++PE F+  + E+L  S + F   + ++I  QLLD+    PS  +             +GT+ A++    LI IDI   S    D+ +WD+NC  NSPE FA  TV +LGLP E    IA+S+ +Q+
Sbjct:   93 LHAVTIYRDVKPGLDRLVPVRIDCDVDGVRLRDTFTWNLTESTITPEIFADVLCEDLQASPQNFHHHIVKAIKGQLLDYERYSPSALAPVNPQGQGNDSCDNGTLEASDLRT-LIKIDITLGSYCLIDQFEWDLNCKRNSPERFADVTVNELGLPLEFRTAIAHSIREQI 261          
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Match: A0A2D4BHJ2_PYTIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHJ2_PYTIN)

HSP 1 Score: 104 bits (260), Expect = 1.700e-22
Identity = 55/140 (39.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   17 LVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFSKRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQLIDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAYSVHQQL 156
            L+PI +D+DV+G R IDSF W+LH+   + E F+  ++++L L   F+  +A SI  Q+   + +MP W      A   E+L  I I++R +  +Y DR +WD++   N PE+FA+    DLGL  E EA IA S+ +QL
Sbjct:  123 LIPIRLDVDVEGHRFIDSFAWNLHEKDFTYETFAASLVQDLDLPECFLKRIAASIEAQVEKAKRSMP-WXD----AMNTESLHPIFINLRLQDTLYMDRFEWDLSDPRNDPELFAQTVCDDLGLSGEFEAQIALSIREQL 257          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN49_ECTSI8.050e-5449.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A484E0B6_BRELC5.390e-2836.27Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1B619_PLAHL1.720e-2633.65Swi snf-related matrix-associated actin-dependent ... [more]
A0A329S0R6_9STRA1.230e-2534.80Uncharacterized protein n=39 Tax=Phytophthora TaxI... [more]
V9F6J2_PHYPR2.800e-2534.31HTH cro/C1-type domain-containing protein n=2 Tax=... [more]
A0A3M6VHY7_9STRA3.760e-2532.58HMG box domain-containing protein n=2 Tax=Peronosp... [more]
M4BLY5_HYAAE4.370e-2331.42HMG box domain-containing protein n=1 Tax=Hyaloper... [more]
A0A0W8CBZ9_PHYNI1.350e-2240.00Chromatin structure-remodeling complex protein BSH... [more]
A0A507DEV3_9FUNG1.530e-2238.82Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A2D4BHJ2_PYTIN1.700e-2239.29SWI/SNF-related matrix-associated actin-dependent ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 13..160
e-value: 3.8E-29
score: 102.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..180
NoneNo IPR availablePANTHERPTHR10019SNF5coord: 14..174
NoneNo IPR availablePANTHERPTHR10019:SF5SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1coord: 14..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:98721..105912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.2.1mRNA_A-nodosum_M_contig98.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 98208..106076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.2.1 ID=prot_A-nodosum_M_contig98.2.1|Name=mRNA_A-nodosum_M_contig98.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=211bp
MPLPAQALLWDIKREALVPISIDIDVDGVRLIDSFTWDLHQGQLSPEQFS
KRMIEELGLSRGFILPVAQSISRQLLDFRSAMPSWRSDGTVAAAEENLQL
IDIDIRFRSIIYRDRMQWDVNCLNNSPEVFARCTVADLGLPQEMEAPIAY
SVHQQLCKHRMTGSRSSTEDSRQISEDRLGPYISSVQPVDQYEFKSRDWS
DHRPLSKPTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006939SNF5