prot_A-nodosum_M_contig9786.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig9786.1.1
Unique Name	prot_A-nodosum_M_contig9786.1.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	94

Homology

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 1.740e-37
Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFG--VTFLEASARANINITEAFEGLGIEVIRRCE 94
            MGI+LVYDV+D KSFRNV NWMRQIE NA+PDVN +L+GNK DV E ER +SFEQG++LAA+ G  V F E SAR+N+N+TEAFEGL  +VI R +
Sbjct:   30 MGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQ 125

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 3.380e-36
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFG--VTFLEASARANINITEAFEGLGIEVIRRCE 94
            MGI+LVYDV+D KSF+NV NWMRQIE NA+PDVN +L+GNK DV EEER +S EQG++LAA+ G  V F E SAR+N+N+TEAFEGL  +VI R +
Sbjct:   85 MGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQ 180

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A1J3ISU9_NOCCA (Ras-related protein RAB1BV (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ISU9_NOCCA)

HSP 1 Score: 120 bits (300), Expect = 8.880e-33
Identity = 55/92 (59.78%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  LIGNKCDV   ERA++ EQG+ LAA++GV F E SA++N+N+ EAF  + ++V +R
Sbjct:   30 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALAAEYGVQFFETSAKSNLNVEEAFRSIAVDVQKR 121

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)

HSP 1 Score: 118 bits (296), Expect = 1.580e-31
Identity = 53/92 (57.61%), Postives = 74/92 (80.43%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  LIGNKCDV   ER ++ +QG++LAA++GV F E SA++N+N+ EAF  + ++V +R
Sbjct:   84 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYGVQFFETSAKSNLNVEEAFRSIAVDVQKR 175

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.330e-31
Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  LIGNKCDV   ERA++ EQG+ LA ++GV F E SA++N+N+ EAF  + ++V +R
Sbjct:   85 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYGVQFFETSAKSNLNVEEAFRSIAVDVQKR 176

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A6A4ZHT8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZHT8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.750e-31
Identity = 52/92 (56.52%), Postives = 72/92 (78.26%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+NV NWMRQI+ +ASP+VN  L+ NKCDV   ER +S EQG+ LAA++GV F E SA++N+++ EAF  + ++V +R
Sbjct:   17 MGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILVANKCDVDPSERVVSKEQGEALAAEYGVQFFETSAKSNLHVDEAFRSIAVDVQKR 108

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A8J5J3S7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3S7_9STRA)

HSP 1 Score: 110 bits (276), Expect = 8.770e-29
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+N+ NWM QI  NAS +VN  LIGNKCDV   ERA++ +QG+ LA +FG+ F E SA++N NI EAF  + +++ +R
Sbjct:   59 MGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKR 150

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A2T9YS44_9FUNG (Uncharacterized protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9YS44_9FUNG)

HSP 1 Score: 111 bits (278), Expect = 9.450e-29
Identity = 52/92 (56.52%), Postives = 73/92 (79.35%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+DE+SF N+ NW+R +E +AS  VNT LIGNKCD+ E+ R +  E+GK+LA+++G++FLE SA+ANIN+ EAF  L  ++ +R
Sbjct:   87 MGILLVYDVTDERSFNNIKNWIRNVEQHASEGVNTILIGNKCDM-EDRRTVDAERGKQLASEYGLSFLETSAKANINVDEAFFSLARDIKKR 177

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: A0A484DYW2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYW2_BRELC)

HSP 1 Score: 111 bits (277), Expect = 1.590e-28
Identity = 52/92 (56.52%), Postives = 69/92 (75.00%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+N+ NWM QI  NAS +VN  LIGNKCDV   ERA++ +QG+ LA +FGV F E SA++N NI EAF  + +++ +R
Sbjct:   96 MGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDSSERAVTTQQGQDLADEFGVKFFETSAKSNQNIEEAFRSIAMDIQKR 187

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BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Match: H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)

HSP 1 Score: 110 bits (276), Expect = 1.670e-28
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0

Query:    1 MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERAISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRR 92
            MGILLVYDV+D+ SF+N+ NWM QI  NAS +VN  LIGNKCDV   ERA++ +QG+ LA +FG+ F E SA++N NI EAF  + +++ +R
Sbjct:   84 MGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDIQKR 175

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig9786.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FME1_ECTSI	1.740e-37	66.67	Rab8B, RAB family GTPase n=1 Tax=Ectocarpus silicu...	[more]
A0A6H5KUS8_9PHAE	3.380e-36	65.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A1J3ISU9_NOCCA	8.880e-33	59.78	Ras-related protein RAB1BV (Fragment) n=1 Tax=Nocc...	[more]
A0A067CHF2_SAPPC	1.580e-31	57.61	Uncharacterized protein n=5 Tax=Saprolegniaceae Ta...	[more]
A0A485LS68_9STRA	3.330e-31	58.70	Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=...	[more]
A0A6A4ZHT8_9STRA	5.750e-31	56.52	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A8J5J3S7_9STRA	8.770e-29	55.43	Uncharacterized protein (Fragment) n=1 Tax=Phytoph...	[more]
A0A2T9YS44_9FUNG	9.450e-29	56.52	Uncharacterized protein n=1 Tax=Smittium simulii T...	[more]
A0A484DYW2_BRELC	1.590e-28	56.52	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
H3G925_PHYRM	1.670e-28	55.43	Uncharacterized protein n=19 Tax=Oomycota TaxID=47...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 31..44 score: 43.4 coord: 67..89 score: 33.85
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..92 e-value: 2.4E-10 score: 19.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..92 e-value: 3.6E-5 score: -34.1
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..92
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..94 score: 15.828969
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..93 e-value: 1.6E-25 score: 91.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..85
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..86 e-value: 5.4E-24 score: 84.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..94 score: 12.205564

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig9786	contig	A-nodosum_M_contig9786:4749..5910 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig9786.1.1	mRNA_A-nodosum_M_contig9786.1.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig9786 3100..5910 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig9786.1.1 ID=prot_A-nodosum_M_contig9786.1.1|Name=mRNA_A-nodosum_M_contig9786.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=94bp
MGILLVYDVSDEKSFRNVSNWMRQIEANASPDVNTSLIGNKCDVPEEERA
ISFEQGKKLAADFGVTFLEASARANINITEAFEGLGIEVIRRCE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase